RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 H0YC42 278 aa11.14□□□□□ -0.63
SS18-225ENST00000585121 MSTNO14793 375 aa11.14□□□□□ -0.63
SS18-225ENST00000585121 CASKO14936 926 aa11.14□□□□□ -0.63
SS18-225ENST00000585121 CTAG2O75638 210 aa11.14□□□□□ -0.63
SS18-225ENST00000585121 SYNGR4O95473 234 aa11.14□□□□□ -0.63
SS18-225ENST00000585121 KITP10721 976 aa11.14□□□□□ -0.63
SS18-225ENST00000585121 CHI3L1P36222 383 aaPredicted RBP11.14□□□□□ -0.63
SS18-225ENST00000585121 EIF1AXP47813 144 aaKnown RBP11.14□□□□□ -0.63
SS18-225ENST00000585121 P2RX1P51575 399 aa11.14□□□□□ -0.63
SS18-225ENST00000585121 TPD52P55327 224 aaPredicted RBP11.14□□□□□ -0.63
SS18-225ENST00000585121 SUMO3P55854 103 aaPredicted RBP11.14□□□□□ -0.63
SS18-225ENST00000585121 RAC1P63000 192 aa11.14□□□□□ -0.63
SS18-225ENST00000585121 PON3Q15166 354 aa11.14□□□□□ -0.63
SS18-225ENST00000585121 PLPPR5Q32ZL2 321 aa11.14□□□□□ -0.63
SS18-225ENST00000585121 KLHL26Q53HC5 615 aa11.14□□□□□ -0.63
SS18-225ENST00000585121 NXNQ6DKJ4 435 aa11.14□□□□□ -0.63
SS18-225ENST00000585121 C16orf62Q7Z3J2 963 aa11.14□□□□□ -0.63
SS18-225ENST00000585121 ANKRD46Q86W74 232 aa11.14□□□□□ -0.63
SS18-225ENST00000585121 TRIML2Q8N7C3 387 aa11.14□□□□□ -0.63
SS18-225ENST00000585121 OR5D16Q8NGK9 328 aa11.14□□□□□ -0.63
SS18-225ENST00000585121 ARL8AQ96BM9 186 aa11.14□□□□□ -0.63
SS18-225ENST00000585121 RNF145Q96MT1 663 aa11.14□□□□□ -0.63
SS18-225ENST00000585121 SDF2Q99470 211 aa11.14□□□□□ -0.63
SS18-225ENST00000585121 GPATCH1Q9BRR8 931 aaKnown RBP11.14□□□□□ -0.63
SS18-225ENST00000585121 GALNT8Q9NY28 637 aa11.14□□□□□ -0.63
SS18-225ENST00000585121 MCTS1Q9ULC4 181 aaKnown RBP11.14□□□□□ -0.63
SS18-225ENST00000585121 DTNAQ9Y4J8 743 aa11.14□□□□□ -0.63
SS18-225ENST00000585121 KCNE3Q9Y6H6 103 aa11.14□□□□□ -0.63
SS18-225ENST00000585121 OTOGQ6ZRI0 2925 aa11.14□□□□□ -0.63
SS18-225ENST00000585121 ANKRD17O75179 2603 aaKnown RBP11.14□□□□□ -0.63
SS18-225ENST00000585121 CSMD2Q7Z408 3487 aa11.14□□□□□ -0.63
SS18-225ENST00000585121 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.14□□□□□ -0.63
SS18-225ENST00000585121 NPIPA5A0A0B4J1W7 369 aa11.14□□□□□ -0.63
SS18-225ENST00000585121 A8MXE2 369 aa11.14□□□□□ -0.63
SS18-225ENST00000585121 NPIPA7E9PJI5 369 aa11.14□□□□□ -0.63
SS18-225ENST00000585121 SDHDO14521 159 aa11.14□□□□□ -0.63
SS18-225ENST00000585121 EIF4E2O60573 245 aaKnown RBP11.14□□□□□ -0.63
SS18-225ENST00000585121 SNNO75324 88 aaPredicted RBP11.14□□□□□ -0.63
SS18-225ENST00000585121 STX11O75558 287 aa11.14□□□□□ -0.63
SS18-225ENST00000585121 TNFSF13O75888 250 aa11.14□□□□□ -0.63
SS18-225ENST00000585121 GOSR1O95249 250 aa11.14□□□□□ -0.63
SS18-225ENST00000585121 PLGP00747 810 aaPredicted RBP11.14□□□□□ -0.63
SS18-225ENST00000585121 NPIPA8P0DM63 369 aa11.14□□□□□ -0.63
SS18-225ENST00000585121 CPOXP36551 454 aa11.14□□□□□ -0.63
SS18-225ENST00000585121 RPS26P62854 115 aaKnown RBP11.14□□□□□ -0.63
SS18-225ENST00000585121 SIRPAP78324 504 aa11.14□□□□□ -0.63
SS18-225ENST00000585121 ZNF117Q03924 483 aa11.14□□□□□ -0.63
SS18-225ENST00000585121 LRRC74AQ0VAA2 488 aa11.14□□□□□ -0.63
SS18-225ENST00000585121 DAZAP2Q15038 168 aaPredicted RBP11.14□□□□□ -0.63
SS18-225ENST00000585121 CD226Q15762 336 aa11.14□□□□□ -0.63
SS18-225ENST00000585121 FAM174BQ3ZCQ3 159 aa11.14□□□□□ -0.63
SS18-225ENST00000585121 SPANXN4Q5MJ08 99 aa11.14□□□□□ -0.63
SS18-225ENST00000585121 ESPNLQ6ZVH7 1005 aa11.14□□□□□ -0.63
SS18-225ENST00000585121 TMCO5AQ8N6Q1 288 aa11.14□□□□□ -0.63
SS18-225ENST00000585121 CHDHQ8NE62 594 aaPredicted RBP11.14□□□□□ -0.63
SS18-225ENST00000585121 TOR1AIP2Q8NFQ8 470 aa11.14□□□□□ -0.63
SS18-225ENST00000585121 LINC01560Q8TB33 94 aa11.14□□□□□ -0.63
SS18-225ENST00000585121 FNDC9Q8TBE3 224 aa11.14□□□□□ -0.63
SS18-225ENST00000585121 TLCD1Q96CP7 247 aa11.14□□□□□ -0.63
SS18-225ENST00000585121 ZNF845Q96IR2 970 aaPredicted RBP11.14□□□□□ -0.63
SS18-225ENST00000585121 SLC39A3Q9BRY0 314 aa11.14□□□□□ -0.63
SS18-225ENST00000585121 NMUR2Q9GZQ4 415 aa11.14□□□□□ -0.63
SS18-225ENST00000585121 CLEC4MQ9H2X3 399 aaPredicted RBP11.14□□□□□ -0.63
SS18-225ENST00000585121 OR51I1Q9H343 314 aa11.14□□□□□ -0.63
SS18-225ENST00000585121 RNF122Q9H9V4 155 aa11.14□□□□□ -0.63
SS18-225ENST00000585121 TIGARQ9NQ88 270 aa11.14□□□□□ -0.63
SS18-225ENST00000585121 RASSF1Q9NS23 344 aa11.14□□□□□ -0.63
SS18-225ENST00000585121 MARCOQ9UEW3 520 aaPredicted RBP11.14□□□□□ -0.63
SS18-225ENST00000585121 CARD8Q9Y2G2 431 aa11.14□□□□□ -0.63
SS18-225ENST00000585121 EMC9Q9Y3B6 208 aa11.14□□□□□ -0.63
SS18-225ENST00000585121 DOCK7Q96N67 2140 aa11.14□□□□□ -0.63
SS18-225ENST00000585121 GJE1A6NN92 205 aa11.13□□□□□ -0.63
SS18-225ENST00000585121 ANKRD28O15084 1053 aa11.13□□□□□ -0.63
SS18-225ENST00000585121 ELK4P28324 431 aa11.13□□□□□ -0.63
SS18-225ENST00000585121 ADH6P28332 368 aa11.13□□□□□ -0.63
SS18-225ENST00000585121 EPHA3P29320 983 aa11.13□□□□□ -0.63
SS18-225ENST00000585121 KCNJ5P48544 419 aa11.13□□□□□ -0.63
SS18-225ENST00000585121 KHKP50053 298 aa11.13□□□□□ -0.63
SS18-225ENST00000585121 ANXA11P50995 505 aaKnown RBP11.13□□□□□ -0.63
SS18-225ENST00000585121 CTBP2P56545 445 aa11.13□□□□□ -0.63
SS18-225ENST00000585121 NME5P56597 212 aa11.13□□□□□ -0.63
SS18-225ENST00000585121 CBFBQ13951 182 aa11.13□□□□□ -0.63
SS18-225ENST00000585121 GPR68Q15743 365 aa11.13□□□□□ -0.63
SS18-225ENST00000585121 ARHGAP11BQ3KRB8 267 aa11.13□□□□□ -0.63
SS18-225ENST00000585121 TTMPQ5BVD1 217 aa11.13□□□□□ -0.63
SS18-225ENST00000585121 HBMQ6B0K9 141 aa11.13□□□□□ -0.63
SS18-225ENST00000585121 GTF2IRD2BQ6EKJ0 949 aa11.13□□□□□ -0.63
SS18-225ENST00000585121 GTF2IRD2Q86UP8 949 aa11.13□□□□□ -0.63
SS18-225ENST00000585121 GGNQ86UU5 652 aa11.13□□□□□ -0.63
SS18-225ENST00000585121 CLEC4FQ8N1N0 589 aa11.13□□□□□ -0.63
SS18-225ENST00000585121 GLB1L3Q8NCI6 653 aaPredicted RBP11.13□□□□□ -0.63
SS18-225ENST00000585121 OR10D3Q8NH80 312 aa11.13□□□□□ -0.63
SS18-225ENST00000585121 OR2V1Q8NHB1 315 aa11.13□□□□□ -0.63
SS18-225ENST00000585121 RFWD2Q8NHY2 731 aa11.13□□□□□ -0.63
SS18-225ENST00000585121 MIPOL1Q8TD10 442 aa11.13□□□□□ -0.63
SS18-225ENST00000585121 XAGE5Q8WWM1 108 aa11.13□□□□□ -0.63
SS18-225ENST00000585121 STARD4Q96DR4 205 aa11.13□□□□□ -0.63
SS18-225ENST00000585121 REXO5Q96IC2 774 aaKnown RBP11.13□□□□□ -0.63
SS18-225ENST00000585121 DACH2Q96NX9 599 aa11.13□□□□□ -0.63
SS18-225ENST00000585121 WDR55Q9H6Y2 383 aaPredicted RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms