RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 NID1P14543 1247 aa13.4□□□□□ -0.26
VAPA-209ENST00000585042 SDC1P18827 310 aa13.4□□□□□ -0.26
VAPA-209ENST00000585042 RPL3P39023 403 aaKnown RBP13.4□□□□□ -0.26
VAPA-209ENST00000585042 PPP2R2BQ00005 443 aa13.4□□□□□ -0.26
VAPA-209ENST00000585042 DUSP5Q16690 384 aa13.4□□□□□ -0.26
VAPA-209ENST00000585042 RFTN2Q52LD8 501 aaPredicted RBP13.4□□□□□ -0.26
VAPA-209ENST00000585042 ZNF385BQ569K4 471 aa13.4□□□□□ -0.26
VAPA-209ENST00000585042 CLEC6AQ6EIG7 209 aa13.4□□□□□ -0.26
VAPA-209ENST00000585042 PPP4R4Q6NUP7 873 aa13.4□□□□□ -0.26
VAPA-209ENST00000585042 LILRA2Q8N149 483 aa13.4□□□□□ -0.26
VAPA-209ENST00000585042 NATD1Q8N6N6 113 aa13.4□□□□□ -0.26
VAPA-209ENST00000585042 ZNF527Q8NB42 609 aa13.4□□□□□ -0.26
VAPA-209ENST00000585042 EPS8L3Q8TE67 593 aaKnown RBP13.4□□□□□ -0.26
VAPA-209ENST00000585042 CPNE4Q96A23 557 aaPredicted RBP13.4□□□□□ -0.26
VAPA-209ENST00000585042 PLPPR2Q96GM1 343 aa13.4□□□□□ -0.26
VAPA-209ENST00000585042 KLHL15Q96M94 604 aa13.4□□□□□ -0.26
VAPA-209ENST00000585042 TACO1Q9BSH4 297 aaKnown RBP13.4□□□□□ -0.26
VAPA-209ENST00000585042 PIGUQ9H490 435 aa13.4□□□□□ -0.26
VAPA-209ENST00000585042 CLEC4AQ9UMR7 237 aa13.4□□□□□ -0.26
VAPA-209ENST00000585042 ACTL7BQ9Y614 415 aa13.4□□□□□ -0.26
VAPA-209ENST00000585042 ROS1P08922 2347 aa13.4□□□□□ -0.26
VAPA-209ENST00000585042 JMJD1CQ15652 2540 aa13.4□□□□□ -0.26
VAPA-209ENST00000585042 ZANQ9Y493 2812 aa13.39□□□□□ -0.27
VAPA-209ENST00000585042 TRIM64A6NGJ6 449 aa13.39□□□□□ -0.27
VAPA-209ENST00000585042 TRIM64BA6NI03 449 aa13.39□□□□□ -0.27
VAPA-209ENST00000585042 COPEO14579 308 aa13.39□□□□□ -0.27
VAPA-209ENST00000585042 SMAD7O15105 426 aaKnown RBP13.39□□□□□ -0.27
VAPA-209ENST00000585042 LSM1O15116 133 aaKnown RBP13.39□□□□□ -0.27
VAPA-209ENST00000585042 AKAP10O43572 662 aa13.39□□□□□ -0.27
VAPA-209ENST00000585042 AGTR1P30556 359 aa13.39□□□□□ -0.27
VAPA-209ENST00000585042 SUMO3P55854 103 aaPredicted RBP13.39□□□□□ -0.27
VAPA-209ENST00000585042 POU6F2P78424 691 aaPredicted RBP13.39□□□□□ -0.27
VAPA-209ENST00000585042 ETFDHQ16134 617 aa13.39□□□□□ -0.27
VAPA-209ENST00000585042 TMEM201Q5SNT2 666 aa13.39□□□□□ -0.27
VAPA-209ENST00000585042 ANKRD26P1Q6NSI1 321 aa13.39□□□□□ -0.27
VAPA-209ENST00000585042 FIGNL1Q6PIW4 674 aa13.39□□□□□ -0.27
VAPA-209ENST00000585042 DNAJC14Q6Y2X3 702 aaPredicted RBP13.39□□□□□ -0.27
VAPA-209ENST00000585042 SLC43A2Q8N370 569 aa13.39□□□□□ -0.27
VAPA-209ENST00000585042 MREGQ8N565 214 aa13.39□□□□□ -0.27
VAPA-209ENST00000585042 COX18Q8N8Q8 333 aa13.39□□□□□ -0.27
VAPA-209ENST00000585042 CCDC63Q8NA47 563 aa13.39□□□□□ -0.27
VAPA-209ENST00000585042 POC1BQ8TC44 478 aa13.39□□□□□ -0.27
VAPA-209ENST00000585042 RNF128Q8TEB7 428 aa13.39□□□□□ -0.27
VAPA-209ENST00000585042 HSD17B8Q92506 261 aa13.39□□□□□ -0.27
VAPA-209ENST00000585042 TSSK3Q96PN8 268 aa13.39□□□□□ -0.27
VAPA-209ENST00000585042 ATP6V1HQ9UI12 483 aa13.39□□□□□ -0.27
VAPA-209ENST00000585042 RAB21Q9UL25 225 aa13.39□□□□□ -0.27
VAPA-209ENST00000585042 DNAJC15Q9Y5T4 150 aa13.39□□□□□ -0.27
VAPA-209ENST00000585042 GPC6Q9Y625 555 aaPredicted RBP13.39□□□□□ -0.27
VAPA-209ENST00000585042 TMEM114B3SHH9 223 aa13.38□□□□□ -0.27
VAPA-209ENST00000585042 H3BNH8 94 aa13.38□□□□□ -0.27
VAPA-209ENST00000585042 TRIM13O60858 407 aa13.38□□□□□ -0.27
VAPA-209ENST00000585042 ERLIN1O75477 346 aa13.38□□□□□ -0.27
VAPA-209ENST00000585042 PRKD3O94806 890 aa13.38□□□□□ -0.27
VAPA-209ENST00000585042 BCKDHAP12694 445 aa13.38□□□□□ -0.27
VAPA-209ENST00000585042 KRT4P19013 534 aa13.38□□□□□ -0.27
VAPA-209ENST00000585042 P2RX1P51575 399 aa13.38□□□□□ -0.27
VAPA-209ENST00000585042 P2RY6Q15077 328 aa13.38□□□□□ -0.27
VAPA-209ENST00000585042 ZNF239Q16600 458 aaKnown RBP13.38□□□□□ -0.27
VAPA-209ENST00000585042 KLHL26Q53HC5 615 aa13.38□□□□□ -0.27
VAPA-209ENST00000585042 KANK2Q63ZY3 851 aa13.38□□□□□ -0.27
VAPA-209ENST00000585042 SSX8Q7RTT4 187 aa13.38□□□□□ -0.27
VAPA-209ENST00000585042 ZAR1Q86SH2 424 aa13.38□□□□□ -0.27
VAPA-209ENST00000585042 CROCCP2Q86T23 111 aa13.38□□□□□ -0.27
VAPA-209ENST00000585042 PRIMA1Q86XR5 153 aa13.38□□□□□ -0.27
VAPA-209ENST00000585042 WFDC8Q8IUA0 241 aa13.38□□□□□ -0.27
VAPA-209ENST00000585042 GABRG1Q8N1C3 465 aa13.38□□□□□ -0.27
VAPA-209ENST00000585042 GATSQ8NAP1 163 aa13.38□□□□□ -0.27
VAPA-209ENST00000585042 OR2T11Q8NH01 316 aa13.38□□□□□ -0.27
VAPA-209ENST00000585042 PSMA8Q8TAA3 256 aa13.38□□□□□ -0.27
VAPA-209ENST00000585042 FAM120BQ96EK7 910 aaKnown RBP13.38□□□□□ -0.27
VAPA-209ENST00000585042 TRMT61AQ96FX7 289 aaKnown RBP13.38□□□□□ -0.27
VAPA-209ENST00000585042 C16orf58Q96GQ5 468 aa13.38□□□□□ -0.27
VAPA-209ENST00000585042 NPAS1Q99742 590 aa13.38□□□□□ -0.27
VAPA-209ENST00000585042 TUBB1Q9H4B7 451 aa13.38□□□□□ -0.27
VAPA-209ENST00000585042 FBXO34Q9NWN3 711 aa13.38□□□□□ -0.27
VAPA-209ENST00000585042 BAIAP2L1Q9UHR4 511 aa13.38□□□□□ -0.27
VAPA-209ENST00000585042 TLN2Q9Y4G6 2542 aa13.38□□□□□ -0.27
VAPA-209ENST00000585042 OVOL3O00110 214 aa13.37□□□□□ -0.27
VAPA-209ENST00000585042 ZNF195O14628 629 aa13.37□□□□□ -0.27
VAPA-209ENST00000585042 GCM2O75603 506 aaPredicted RBP13.37□□□□□ -0.27
VAPA-209ENST00000585042 PLAUP00749 431 aa13.37□□□□□ -0.27
VAPA-209ENST00000585042 OPN1LWP04000 364 aa13.37□□□□□ -0.27
VAPA-209ENST00000585042 HMGN2P05204 90 aaKnown RBP13.37□□□□□ -0.27
VAPA-209ENST00000585042 FESP07332 822 aa13.37□□□□□ -0.27
VAPA-209ENST00000585042 YES1P07947 543 aa13.37□□□□□ -0.27
VAPA-209ENST00000585042 KRT16P08779 473 aa13.37□□□□□ -0.27
VAPA-209ENST00000585042 LINC00032P0C843 101 aa13.37□□□□□ -0.27
VAPA-209ENST00000585042 ATP6V1C1P21283 382 aa13.37□□□□□ -0.27
VAPA-209ENST00000585042 MAPK1P28482 360 aa13.37□□□□□ -0.27
VAPA-209ENST00000585042 ATP5J2P56134 94 aa13.37□□□□□ -0.27
VAPA-209ENST00000585042 CD226Q15762 336 aa13.37□□□□□ -0.27
VAPA-209ENST00000585042 SFRP5Q5T4F7 317 aa13.37□□□□□ -0.27
VAPA-209ENST00000585042 CDC73Q6P1J9 531 aa13.37□□□□□ -0.27
VAPA-209ENST00000585042 SZRD1Q7Z422 152 aa13.37□□□□□ -0.27
VAPA-209ENST00000585042 OR2W6PQ8NHA6 318 aa13.37□□□□□ -0.27
VAPA-209ENST00000585042 AKAP1Q92667 903 aaKnown RBP eCLIP13.37□□□□□ -0.27
VAPA-209ENST00000585042 SH3YL1Q96HL8 342 aaPredicted RBP13.37□□□□□ -0.27
VAPA-209ENST00000585042 GATA5Q9BWX5 397 aaPredicted RBP13.37□□□□□ -0.27
VAPA-209ENST00000585042 ACTRT3Q9BYD9 372 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms