RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 JSRP1Q96MG2 331 aaPredicted RBP16.73■□□□□ 0.27
RFFL-211ENST00000584541 FRMD6Q96NE9 622 aa16.73■□□□□ 0.27
RFFL-211ENST00000584541 UGT2B28Q9BY64 529 aa16.73■□□□□ 0.27
RFFL-211ENST00000584541 HES7Q9BYE0 225 aa16.73■□□□□ 0.27
RFFL-211ENST00000584541 RLIMQ9NVW2 624 aa16.73■□□□□ 0.27
RFFL-211ENST00000584541 SLC9A8Q9Y2E8 581 aa16.73■□□□□ 0.27
RFFL-211ENST00000584541 CARD8Q9Y2G2 431 aa16.73■□□□□ 0.27
RFFL-211ENST00000584541 CSAG2Q9Y5P2 127 aa16.73■□□□□ 0.27
RFFL-211ENST00000584541 ANKRD65E5RJM6 399 aa16.72■□□□□ 0.27
RFFL-211ENST00000584541 K7EM74 188 aa16.72■□□□□ 0.27
RFFL-211ENST00000584541 SNPHO15079 494 aa16.72■□□□□ 0.27
RFFL-211ENST00000584541 PRKD3O94806 890 aa16.72■□□□□ 0.27
RFFL-211ENST00000584541 LGI1O95970 557 aa16.72■□□□□ 0.27
RFFL-211ENST00000584541 ELAVL4P26378 380 aaKnown RBP16.72■□□□□ 0.27
RFFL-211ENST00000584541 CD97P48960 835 aa16.72■□□□□ 0.27
RFFL-211ENST00000584541 GLIPR1L2Q4G1C9 344 aa16.72■□□□□ 0.27
RFFL-211ENST00000584541 IFI44LQ53G44 452 aa16.72■□□□□ 0.27
RFFL-211ENST00000584541 Q6ZS92 163 aa16.72■□□□□ 0.27
RFFL-211ENST00000584541 CLIP4Q8N3C7 705 aa16.72■□□□□ 0.27
RFFL-211ENST00000584541 TOR1AIP2Q8NFQ8 470 aa16.72■□□□□ 0.27
RFFL-211ENST00000584541 OR2M7Q8NG81 312 aa16.72■□□□□ 0.27
RFFL-211ENST00000584541 GPR32P1Q8NGA4 272 aa16.72■□□□□ 0.27
RFFL-211ENST00000584541 OR4K17Q8NGC6 315 aa16.72■□□□□ 0.27
RFFL-211ENST00000584541 B4GALNT2Q8NHY0 566 aa16.72■□□□□ 0.27
RFFL-211ENST00000584541 CNOT9Q92600 299 aaKnown RBP16.72■□□□□ 0.27
RFFL-211ENST00000584541 SLC35B4Q969S0 331 aa16.72■□□□□ 0.27
RFFL-211ENST00000584541 SH3YL1Q96HL8 342 aaPredicted RBP16.72■□□□□ 0.27
RFFL-211ENST00000584541 PYURFQ96I23 114 aa16.72■□□□□ 0.27
RFFL-211ENST00000584541 HSH2DQ96JZ2 352 aa16.72■□□□□ 0.27
RFFL-211ENST00000584541 RTN4RQ9BZR6 473 aa16.72■□□□□ 0.27
RFFL-211ENST00000584541 LAT2Q9GZY6 243 aa16.72■□□□□ 0.27
RFFL-211ENST00000584541 PROK2Q9HC23 129 aa16.72■□□□□ 0.27
RFFL-211ENST00000584541 EXOSC3Q9NQT5 275 aaKnown RBP16.72■□□□□ 0.27
RFFL-211ENST00000584541 ZNF71Q9NQZ8 489 aaPredicted RBP16.72■□□□□ 0.27
RFFL-211ENST00000584541 DNAJB12Q9NXW2 375 aaKnown RBP16.72■□□□□ 0.27
RFFL-211ENST00000584541 SH3GLB1Q9Y371 365 aa16.72■□□□□ 0.27
RFFL-211ENST00000584541 V9GYQ6 96 aa16.72■□□□□ 0.27
RFFL-211ENST00000584541 ERVH48-1M5A8F1 160 aa16.71■□□□□ 0.27
RFFL-211ENST00000584541 GNB5O14775 395 aa16.71■□□□□ 0.27
RFFL-211ENST00000584541 TRIM3O75382 744 aaPredicted RBP16.71■□□□□ 0.27
RFFL-211ENST00000584541 UMPSP11172 480 aa16.71■□□□□ 0.27
RFFL-211ENST00000584541 UQCRBP14927 111 aa16.71■□□□□ 0.27
RFFL-211ENST00000584541 SLC6A8P48029 635 aa16.71■□□□□ 0.27
RFFL-211ENST00000584541 MEOX1P50221 254 aa16.71■□□□□ 0.27
RFFL-211ENST00000584541 P2RX1P51575 399 aa16.71■□□□□ 0.27
RFFL-211ENST00000584541 CCR4P51679 360 aa16.71■□□□□ 0.27
RFFL-211ENST00000584541 RGS8P57771 180 aaPredicted RBP16.71■□□□□ 0.27
RFFL-211ENST00000584541 ZNF117Q03924 483 aa16.71■□□□□ 0.27
RFFL-211ENST00000584541 SKP2Q13309 424 aa16.71■□□□□ 0.27
RFFL-211ENST00000584541 PLCZ1Q86YW0 608 aa16.71■□□□□ 0.27
RFFL-211ENST00000584541 C10orf67Q8IYJ2 551 aa16.71■□□□□ 0.27
RFFL-211ENST00000584541 RBMXL3Q8N7X1 1067 aaKnown RBP16.71■□□□□ 0.27
RFFL-211ENST00000584541 FAM71CQ8NEG0 241 aa16.71■□□□□ 0.27
RFFL-211ENST00000584541 GEMIN6Q8WXD5 167 aaKnown RBP16.71■□□□□ 0.27
RFFL-211ENST00000584541 NTNG2Q96CW9 530 aa16.71■□□□□ 0.27
RFFL-211ENST00000584541 RSRC1Q96IZ7 334 aaKnown RBP16.71■□□□□ 0.27
RFFL-211ENST00000584541 PTGES2Q9H7Z7 377 aa16.71■□□□□ 0.27
RFFL-211ENST00000584541 DEPPQ9NTK1 212 aa16.71■□□□□ 0.27
RFFL-211ENST00000584541 B4GALT7Q9UBV7 327 aa16.71■□□□□ 0.27
RFFL-211ENST00000584541 B3GNT3Q9Y2A9 372 aa16.71■□□□□ 0.27
RFFL-211ENST00000584541 CNTRLQ7Z7A1 2325 aa16.7■□□□□ 0.26
RFFL-211ENST00000584541 IGLV3-32A0A0A0MS00 114 aa16.7■□□□□ 0.26
RFFL-211ENST00000584541 A0A0G2JMM0 328 aa16.7■□□□□ 0.26
RFFL-211ENST00000584541 A0A1W2PPB8 328 aa16.7■□□□□ 0.26
RFFL-211ENST00000584541 A0A1W2PRS3 328 aa16.7■□□□□ 0.26
RFFL-211ENST00000584541 TCRBV5S2A0A599 114 aa16.7■□□□□ 0.26
RFFL-211ENST00000584541 KIR3DP1A8MWS1 328 aa16.7■□□□□ 0.26
RFFL-211ENST00000584541 FAM47E-STBD1D6RA91 191 aa16.7■□□□□ 0.26
RFFL-211ENST00000584541 ADAM10O14672 748 aa16.7■□□□□ 0.26
RFFL-211ENST00000584541 NUDT14O95848 222 aa16.7■□□□□ 0.26
RFFL-211ENST00000584541 PSMA4P25789 261 aaKnown RBP16.7■□□□□ 0.26
RFFL-211ENST00000584541 SUMO3P55854 103 aaPredicted RBP16.7■□□□□ 0.26
RFFL-211ENST00000584541 PLGLB1Q02325 96 aa16.7■□□□□ 0.26
RFFL-211ENST00000584541 KCNC4Q03721 635 aa16.7■□□□□ 0.26
RFFL-211ENST00000584541 CBFBQ13951 182 aa16.7■□□□□ 0.26
RFFL-211ENST00000584541 NDUFAF6Q330K2 333 aa16.7■□□□□ 0.26
RFFL-211ENST00000584541 FAM98BQ52LJ0 330 aaKnown RBP16.7■□□□□ 0.26
RFFL-211ENST00000584541 TIGD3Q6B0B8 471 aa16.7■□□□□ 0.26
RFFL-211ENST00000584541 OR5M10Q6IEU7 315 aa16.7■□□□□ 0.26
RFFL-211ENST00000584541 ENPP6Q6UWR7 440 aa16.7■□□□□ 0.26
RFFL-211ENST00000584541 VTCN1Q7Z7D3 282 aa16.7■□□□□ 0.26
RFFL-211ENST00000584541 RANBP3LQ86VV4 465 aaPredicted RBP16.7■□□□□ 0.26
RFFL-211ENST00000584541 CARM1Q86X55 608 aa16.7■□□□□ 0.26
RFFL-211ENST00000584541 OR10Q1Q8NGQ4 319 aa16.7■□□□□ 0.26
RFFL-211ENST00000584541 VANGL1Q8TAA9 524 aaPredicted RBP16.7■□□□□ 0.26
RFFL-211ENST00000584541 SLC47A1Q96FL8 570 aa16.7■□□□□ 0.26
RFFL-211ENST00000584541 ARHGDIGQ99819 225 aa16.7■□□□□ 0.26
RFFL-211ENST00000584541 MFRPQ9BY79 579 aa16.7■□□□□ 0.26
RFFL-211ENST00000584541 DSN1Q9H410 356 aa16.7■□□□□ 0.26
RFFL-211ENST00000584541 ZFP64Q9NPA5 681 aa16.7■□□□□ 0.26
RFFL-211ENST00000584541 TUBA8Q9NY65 449 aaPredicted RBP16.7■□□□□ 0.26
RFFL-211ENST00000584541 MED11Q9P086 117 aa16.7■□□□□ 0.26
RFFL-211ENST00000584541 ANAPC2Q9UJX6 822 aa16.7■□□□□ 0.26
RFFL-211ENST00000584541 CHST2Q9Y4C5 530 aa16.7■□□□□ 0.26
RFFL-211ENST00000584541 HEATR5AQ86XA9 2040 aa16.69■□□□□ 0.26
RFFL-211ENST00000584541 M0R3H8 397 aa16.69■□□□□ 0.26
RFFL-211ENST00000584541 GMFGO60234 142 aa16.69■□□□□ 0.26
RFFL-211ENST00000584541 CBR3O75828 277 aa16.69■□□□□ 0.26
RFFL-211ENST00000584541 EPPINO95925 133 aa16.69■□□□□ 0.26
RFFL-211ENST00000584541 IFNW1P05000 195 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms