RNA–Protein interactions for RNA: ENST00000584216.5

COPS3-218, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 876 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-218ENST00000584216 IKBIPQ70UQ0 350 aa11.84□□□□□ -0.51
COPS3-218ENST00000584216 ATG4DQ86TL0 474 aaPredicted RBP11.84□□□□□ -0.51
COPS3-218ENST00000584216 FBXL14Q8N1E6 418 aa11.84□□□□□ -0.51
COPS3-218ENST00000584216 DEPDC4Q8N2C3 294 aa11.84□□□□□ -0.51
COPS3-218ENST00000584216 CDRT4Q8N9R6 151 aa11.84□□□□□ -0.51
COPS3-218ENST00000584216 SPATA4Q8NEY3 305 aa11.84□□□□□ -0.51
COPS3-218ENST00000584216 OR6Y1Q8NGX8 325 aa11.84□□□□□ -0.51
COPS3-218ENST00000584216 OR4C3Q8NH37 302 aa11.84□□□□□ -0.51
COPS3-218ENST00000584216 CEP70Q8NHQ1 597 aa11.84□□□□□ -0.51
COPS3-218ENST00000584216 B4GALNT2Q8NHY0 566 aa11.84□□□□□ -0.51
COPS3-218ENST00000584216 PIK3R3Q92569 461 aa11.84□□□□□ -0.51
COPS3-218ENST00000584216 GLIPR2Q9H4G4 154 aa11.84□□□□□ -0.51
COPS3-218ENST00000584216 ACSS3Q9H6R3 686 aa11.84□□□□□ -0.51
COPS3-218ENST00000584216 EQTNQ9NQ60 294 aa11.84□□□□□ -0.51
COPS3-218ENST00000584216 UBQLN4Q9NRR5 601 aa11.84□□□□□ -0.51
COPS3-218ENST00000584216 GXYLT2A0PJZ3 443 aa11.83□□□□□ -0.52
COPS3-218ENST00000584216 H7C417 338 aa11.83□□□□□ -0.52
COPS3-218ENST00000584216 NKX2-2O95096 273 aa11.83□□□□□ -0.52
COPS3-218ENST00000584216 IGKV1D-16P01601 117 aa11.83□□□□□ -0.52
COPS3-218ENST00000584216 ZNF16P17020 682 aaPredicted RBP11.83□□□□□ -0.52
COPS3-218ENST00000584216 GGT1P19440 569 aa11.83□□□□□ -0.52
COPS3-218ENST00000584216 USF1P22415 310 aaPredicted RBP11.83□□□□□ -0.52
COPS3-218ENST00000584216 GPC1P35052 558 aa11.83□□□□□ -0.52
COPS3-218ENST00000584216 OR3A2P47893 321 aa11.83□□□□□ -0.52
COPS3-218ENST00000584216 SERPINB4P48594 390 aa11.83□□□□□ -0.52
COPS3-218ENST00000584216 PKNOX1P55347 436 aa11.83□□□□□ -0.52
COPS3-218ENST00000584216 IRX1P78414 480 aaPredicted RBP11.83□□□□□ -0.52
COPS3-218ENST00000584216 BTKQ06187 659 aa11.83□□□□□ -0.52
COPS3-218ENST00000584216 SQLEQ14534 574 aa11.83□□□□□ -0.52
COPS3-218ENST00000584216 FAM166AQ6J272 317 aa11.83□□□□□ -0.52
COPS3-218ENST00000584216 KLHL17Q6TDP4 642 aa11.83□□□□□ -0.52
COPS3-218ENST00000584216 MUC15Q8N387 334 aa11.83□□□□□ -0.52
COPS3-218ENST00000584216 GATSQ8NAP1 163 aa11.83□□□□□ -0.52
COPS3-218ENST00000584216 FAM76AQ8TAV0 307 aa11.83□□□□□ -0.52
COPS3-218ENST00000584216 SH3YL1Q96HL8 342 aaPredicted RBP11.83□□□□□ -0.52
COPS3-218ENST00000584216 DHRS9Q9BPW9 319 aa11.83□□□□□ -0.52
COPS3-218ENST00000584216 BCO1Q9HAY6 547 aa11.83□□□□□ -0.52
COPS3-218ENST00000584216 MYNNQ9NPC7 610 aa11.83□□□□□ -0.52
COPS3-218ENST00000584216 GOLGA8QA0A0J9YX86 632 aa11.82□□□□□ -0.52
COPS3-218ENST00000584216 A0A1W2PQD3 144 aa11.82□□□□□ -0.52
COPS3-218ENST00000584216 SERTM1A2A2V5 107 aa11.82□□□□□ -0.52
COPS3-218ENST00000584216 GOLGA8OA6NCC3 632 aa11.82□□□□□ -0.52
COPS3-218ENST00000584216 GOLGA8NF8WBI6 632 aa11.82□□□□□ -0.52
COPS3-218ENST00000584216 GOLGA8RI6L899 631 aa11.82□□□□□ -0.52
COPS3-218ENST00000584216 RGS14O43566 566 aa11.82□□□□□ -0.52
COPS3-218ENST00000584216 LYZL6O75951 148 aa11.82□□□□□ -0.52
COPS3-218ENST00000584216 LINGO3P0C6S8 592 aa11.82□□□□□ -0.52
COPS3-218ENST00000584216 DHRS4L1P0CG22 281 aa11.82□□□□□ -0.52
COPS3-218ENST00000584216 IGHV4-31P0DP07 118 aa11.82□□□□□ -0.52
COPS3-218ENST00000584216 PTAFRP25105 342 aa11.82□□□□□ -0.52
COPS3-218ENST00000584216 SLC7A1P30825 629 aa11.82□□□□□ -0.52
COPS3-218ENST00000584216 LSM11P83369 360 aaKnown RBP eCLIP11.82□□□□□ -0.52
COPS3-218ENST00000584216 LCP2Q13094 533 aa11.82□□□□□ -0.52
COPS3-218ENST00000584216 IMPG1Q17R60 797 aa11.82□□□□□ -0.52
COPS3-218ENST00000584216 ARL13AQ5H913 290 aaPredicted RBP11.82□□□□□ -0.52
COPS3-218ENST00000584216 ZNF678Q5SXM1 525 aa11.82□□□□□ -0.52
COPS3-218ENST00000584216 TEX35Q5T0J7 233 aa11.82□□□□□ -0.52
COPS3-218ENST00000584216 FAM71E1Q6IPT2 247 aa11.82□□□□□ -0.52
COPS3-218ENST00000584216 C11orf71Q6IPW1 123 aa11.82□□□□□ -0.52
COPS3-218ENST00000584216 SLC22A25Q6T423 547 aa11.82□□□□□ -0.52
COPS3-218ENST00000584216 ZDHHC24Q6UX98 284 aa11.82□□□□□ -0.52
COPS3-218ENST00000584216 Q6ZSR9 355 aa11.82□□□□□ -0.52
COPS3-218ENST00000584216 MTERF4Q7Z6M4 381 aaKnown RBP11.82□□□□□ -0.52
COPS3-218ENST00000584216 ZNF525Q8N782 197 aa11.82□□□□□ -0.52
COPS3-218ENST00000584216 OR2W6PQ8NHA6 318 aa11.82□□□□□ -0.52
COPS3-218ENST00000584216 ZFP28Q8NHY6 868 aa11.82□□□□□ -0.52
COPS3-218ENST00000584216 POC1BQ8TC44 478 aa11.82□□□□□ -0.52
COPS3-218ENST00000584216 HOXB13Q92826 284 aaPredicted RBP11.82□□□□□ -0.52
COPS3-218ENST00000584216 ARL8AQ96BM9 186 aa11.82□□□□□ -0.52
COPS3-218ENST00000584216 NPAS1Q99742 590 aa11.82□□□□□ -0.52
COPS3-218ENST00000584216 SRXN1Q9BYN0 137 aa11.82□□□□□ -0.52
COPS3-218ENST00000584216 MANSC1Q9H8J5 431 aa11.82□□□□□ -0.52
COPS3-218ENST00000584216 GPC6Q9Y625 555 aaPredicted RBP11.82□□□□□ -0.52
COPS3-218ENST00000584216 OR5H1A6NKK0 313 aa11.81□□□□□ -0.52
COPS3-218ENST00000584216 ZNF814B7Z6K7 855 aa11.81□□□□□ -0.52
COPS3-218ENST00000584216 H3BNH8 94 aa11.81□□□□□ -0.52
COPS3-218ENST00000584216 ZNF195O14628 629 aa11.81□□□□□ -0.52
COPS3-218ENST00000584216 NTN1O95631 604 aa11.81□□□□□ -0.52
COPS3-218ENST00000584216 NUDT14O95848 222 aa11.81□□□□□ -0.52
COPS3-218ENST00000584216 PGRP06401 933 aa11.81□□□□□ -0.52
COPS3-218ENST00000584216 HTR6P50406 440 aa11.81□□□□□ -0.52
COPS3-218ENST00000584216 FABP6P51161 128 aa11.81□□□□□ -0.52
COPS3-218ENST00000584216 EFNA4P52798 201 aa11.81□□□□□ -0.52
COPS3-218ENST00000584216 SUMO3P55854 103 aaPredicted RBP11.81□□□□□ -0.52
COPS3-218ENST00000584216 RAC3P60763 192 aa11.81□□□□□ -0.52
COPS3-218ENST00000584216 CHRNB3Q05901 458 aa11.81□□□□□ -0.52
COPS3-218ENST00000584216 FOXF1Q12946 379 aa11.81□□□□□ -0.52
COPS3-218ENST00000584216 HSPB3Q12988 150 aa11.81□□□□□ -0.52
COPS3-218ENST00000584216 TMEM176BQ3YBM2 270 aaPredicted RBP11.81□□□□□ -0.52
COPS3-218ENST00000584216 ZNF544Q6NX49 715 aa11.81□□□□□ -0.52
COPS3-218ENST00000584216 SZRD1Q7Z422 152 aa11.81□□□□□ -0.52
COPS3-218ENST00000584216 SLC22A9Q8IVM8 553 aa11.81□□□□□ -0.52
COPS3-218ENST00000584216 ZNF527Q8NB42 609 aa11.81□□□□□ -0.52
COPS3-218ENST00000584216 C10orf105Q8TEF2 133 aa11.81□□□□□ -0.52
COPS3-218ENST00000584216 ZFP90Q8TF47 636 aa11.81□□□□□ -0.52
COPS3-218ENST00000584216 MS4A4EQ96PG1 132 aa11.81□□□□□ -0.52
COPS3-218ENST00000584216 PMF1-BGLAPU3KQ54 211 aa11.81□□□□□ -0.52
COPS3-218ENST00000584216 ANK2Q01484 3957 aa11.81□□□□□ -0.52
COPS3-218ENST00000584216 NDUFS8O00217 210 aa11.8□□□□□ -0.52
COPS3-218ENST00000584216 PDPK1O15530 556 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms