RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 HDXQ7Z353 690 aa18.4■□□□□ 0.54
SS18-224ENST00000584083 KIF18BQ86Y91 864 aa18.4■□□□□ 0.54
SS18-224ENST00000584083 ZZZ3Q8IYH5 903 aa18.4■□□□□ 0.54
SS18-224ENST00000584083 GTPBP8Q8N3Z3 284 aaPredicted RBP18.4■□□□□ 0.54
SS18-224ENST00000584083 CHDHQ8NE62 594 aaPredicted RBP18.4■□□□□ 0.54
SS18-224ENST00000584083 XAGE5Q8WWM1 108 aa18.4■□□□□ 0.54
SS18-224ENST00000584083 FIG4Q92562 907 aa18.4■□□□□ 0.54
SS18-224ENST00000584083 MARK4Q96L34 752 aa18.4■□□□□ 0.54
SS18-224ENST00000584083 RNF145Q96MT1 663 aa18.4■□□□□ 0.54
SS18-224ENST00000584083 CCDC115Q96NT0 180 aa18.4■□□□□ 0.54
SS18-224ENST00000584083 PANX1Q96RD7 426 aa18.4■□□□□ 0.54
SS18-224ENST00000584083 SLC35A5Q9BS91 424 aa18.4■□□□□ 0.54
SS18-224ENST00000584083 ARGLU1Q9NWB6 273 aaPredicted RBP18.4■□□□□ 0.54
SS18-224ENST00000584083 TACC2O95359 2948 aa18.39■□□□□ 0.54
SS18-224ENST00000584083 C7orf72A4D263 438 aa18.39■□□□□ 0.53
SS18-224ENST00000584083 CCDC154A6NI56 674 aa18.39■□□□□ 0.53
SS18-224ENST00000584083 NPIPB9F8W1W9 429 aa18.39■□□□□ 0.53
SS18-224ENST00000584083 EIF1AYO14602 144 aaKnown RBP18.39■□□□□ 0.53
SS18-224ENST00000584083 OIP5O43482 229 aa18.39■□□□□ 0.53
SS18-224ENST00000584083 DIAPH2O60879 1101 aa18.39■□□□□ 0.53
SS18-224ENST00000584083 PGRP06401 933 aa18.39■□□□□ 0.53
SS18-224ENST00000584083 OR12D1P0DN82 309 aa18.39■□□□□ 0.53
SS18-224ENST00000584083 CAPN3P20807 821 aa18.39■□□□□ 0.53
SS18-224ENST00000584083 CPA2P48052 419 aa18.39■□□□□ 0.53
SS18-224ENST00000584083 NDUFAF6Q330K2 333 aa18.39■□□□□ 0.53
SS18-224ENST00000584083 SAXO2Q658L1 398 aa18.39■□□□□ 0.53
SS18-224ENST00000584083 PPP4R4Q6NUP7 873 aa18.39■□□□□ 0.53
SS18-224ENST00000584083 MAVSQ7Z434 540 aa18.39■□□□□ 0.53
SS18-224ENST00000584083 LUZP2Q86TE4 346 aa18.39■□□□□ 0.53
SS18-224ENST00000584083 TMEM200AQ86VY9 491 aa18.39■□□□□ 0.53
SS18-224ENST00000584083 RFWD2Q8NHY2 731 aa18.39■□□□□ 0.53
SS18-224ENST00000584083 MIPOL1Q8TD10 442 aa18.39■□□□□ 0.53
SS18-224ENST00000584083 LRRC8CQ8TDW0 803 aa18.39■□□□□ 0.53
SS18-224ENST00000584083 RAB8BQ92930 207 aa18.39■□□□□ 0.53
SS18-224ENST00000584083 NEURL3Q96EH8 262 aa18.39■□□□□ 0.53
SS18-224ENST00000584083 ZNF845Q96IR2 970 aaPredicted RBP18.39■□□□□ 0.53
SS18-224ENST00000584083 MAELQ96JY0 434 aaKnown RBP18.39■□□□□ 0.53
SS18-224ENST00000584083 NPAS1Q99742 590 aa18.39■□□□□ 0.53
SS18-224ENST00000584083 KLHDC3Q9BQ90 382 aa18.39■□□□□ 0.53
SS18-224ENST00000584083 PIGMQ9H3S5 423 aa18.39■□□□□ 0.53
SS18-224ENST00000584083 JKAMPQ9P055 326 aa18.39■□□□□ 0.53
SS18-224ENST00000584083 HEATR5AQ86XA9 2040 aa18.39■□□□□ 0.53
SS18-224ENST00000584083 MYO9AB2RTY4 2548 aa18.38■□□□□ 0.53
SS18-224ENST00000584083 A0A1W2PNV4 684 aa18.38■□□□□ 0.53
SS18-224ENST00000584083 ENO4A6NNW6 628 aa18.38■□□□□ 0.53
SS18-224ENST00000584083 FCMRO60667 390 aa18.38■□□□□ 0.53
SS18-224ENST00000584083 SLC22A3O75751 556 aa18.38■□□□□ 0.53
SS18-224ENST00000584083 OPN1LWP04000 364 aa18.38■□□□□ 0.53
SS18-224ENST00000584083 ME2P23368 584 aa18.38■□□□□ 0.53
SS18-224ENST00000584083 EIF1AXP47813 144 aaKnown RBP18.38■□□□□ 0.53
SS18-224ENST00000584083 KHKP50053 298 aa18.38■□□□□ 0.53
SS18-224ENST00000584083 P2RX1P51575 399 aa18.38■□□□□ 0.53
SS18-224ENST00000584083 PON3Q15166 354 aa18.38■□□□□ 0.53
SS18-224ENST00000584083 PDCD4Q53EL6 469 aaKnown RBP18.38■□□□□ 0.53
SS18-224ENST00000584083 TTMPQ5BVD1 217 aa18.38■□□□□ 0.53
SS18-224ENST00000584083 PDZK1Q5T2W1 519 aa18.38■□□□□ 0.53
SS18-224ENST00000584083 CBLN3Q6UW01 205 aa18.38■□□□□ 0.53
SS18-224ENST00000584083 ZNF621Q6ZSS3 439 aa18.38■□□□□ 0.53
SS18-224ENST00000584083 OLIG3Q7RTU3 272 aa18.38■□□□□ 0.53
SS18-224ENST00000584083 GGNQ86UU5 652 aa18.38■□□□□ 0.53
SS18-224ENST00000584083 TMCO5AQ8N6Q1 288 aa18.38■□□□□ 0.53
SS18-224ENST00000584083 TRIML2Q8N7C3 387 aa18.38■□□□□ 0.53
SS18-224ENST00000584083 CNEP1R1Q8N9A8 125 aa18.38■□□□□ 0.53
SS18-224ENST00000584083 GLB1L3Q8NCI6 653 aaPredicted RBP18.38■□□□□ 0.53
SS18-224ENST00000584083 FNDC9Q8TBE3 224 aa18.38■□□□□ 0.53
SS18-224ENST00000584083 DYDC1Q8WWB3 177 aa18.38■□□□□ 0.53
SS18-224ENST00000584083 OR52B2Q96RD2 323 aa18.38■□□□□ 0.53
SS18-224ENST00000584083 INPP5KQ9BT40 448 aa18.38■□□□□ 0.53
SS18-224ENST00000584083 RBM24Q9BX46 236 aaKnown RBP18.38■□□□□ 0.53
SS18-224ENST00000584083 PRRG4Q9BZD6 226 aa18.38■□□□□ 0.53
SS18-224ENST00000584083 NMUR2Q9GZQ4 415 aa18.38■□□□□ 0.53
SS18-224ENST00000584083 TMEM185BQ9H7F4 350 aa18.38■□□□□ 0.53
SS18-224ENST00000584083 CRIM1Q9NZV1 1036 aa18.38■□□□□ 0.53
SS18-224ENST00000584083 MKLN1Q9UL63 735 aa18.38■□□□□ 0.53
SS18-224ENST00000584083 ZNF175Q9Y473 711 aa18.38■□□□□ 0.53
SS18-224ENST00000584083 USH1CQ9Y6N9 552 aa18.38■□□□□ 0.53
SS18-224ENST00000584083 UBDO15205 165 aa18.37■□□□□ 0.53
SS18-224ENST00000584083 ZNF264O43296 627 aa18.37■□□□□ 0.53
SS18-224ENST00000584083 SMNDC1O75940 238 aaKnown RBP eCLIP18.37■□□□□ 0.53
SS18-224ENST00000584083 CRHP06850 196 aa18.37■□□□□ 0.53
SS18-224ENST00000584083 LINGO3P0C6S8 592 aa18.37■□□□□ 0.53
SS18-224ENST00000584083 UBL4AP11441 157 aa18.37■□□□□ 0.53
SS18-224ENST00000584083 EIF1P41567 113 aaKnown RBP18.37■□□□□ 0.53
SS18-224ENST00000584083 SUMO3P55854 103 aaPredicted RBP18.37■□□□□ 0.53
SS18-224ENST00000584083 RAC1P63000 192 aa18.37■□□□□ 0.53
SS18-224ENST00000584083 LRRC74AQ0VAA2 488 aa18.37■□□□□ 0.53
SS18-224ENST00000584083 GSTA3Q16772 222 aa18.37■□□□□ 0.53
SS18-224ENST00000584083 HEPHL1Q6MZM0 1159 aa18.37■□□□□ 0.53
SS18-224ENST00000584083 METTL25Q8N6Q8 603 aa18.37■□□□□ 0.53
SS18-224ENST00000584083 POC1BQ8TC44 478 aa18.37■□□□□ 0.53
SS18-224ENST00000584083 ROPN1LQ96C74 230 aa18.37■□□□□ 0.53
SS18-224ENST00000584083 PACSIN3Q9UKS6 424 aa18.37■□□□□ 0.53
SS18-224ENST00000584083 ICAM5Q9UMF0 924 aa18.37■□□□□ 0.53
SS18-224ENST00000584083 PDZD2O15018 2839 aa18.37■□□□□ 0.53
SS18-224ENST00000584083 TNFSF12-TNFSF13A0A0A6YY99 330 aa18.36■□□□□ 0.53
SS18-224ENST00000584083 SERINC4A6NH21 518 aa18.36■□□□□ 0.53
SS18-224ENST00000584083 TUBAL3A6NHL2 446 aa18.36■□□□□ 0.53
SS18-224ENST00000584083 ZNF195O14628 629 aa18.36■□□□□ 0.53
SS18-224ENST00000584083 CYP7B1O75881 506 aa18.36■□□□□ 0.53
SS18-224ENST00000584083 TNFSF13O75888 250 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms