RNA–Protein interactions for RNA: ENST00000583732.1

SREBF1-222, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 4

Gene SREBF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-222	ENST00000583732	CARD18	P57730	90 aa		13.5	□□□□□ -0.25
SREBF1-222	ENST00000583732	PDE7A	Q13946	482 aa		13.5	□□□□□ -0.25
SREBF1-222	ENST00000583732	TMEM201	Q5SNT2	666 aa		13.5	□□□□□ -0.25
SREBF1-222	ENST00000583732	NUFIP2	Q7Z417	695 aa	Known RBP	13.5	□□□□□ -0.25
SREBF1-222	ENST00000583732	TRABD2A	Q86V40	505 aa		13.5	□□□□□ -0.25
SREBF1-222	ENST00000583732	MISP	Q8IVT2	679 aa		13.5	□□□□□ -0.25
SREBF1-222	ENST00000583732	C10orf107	Q8IVU9	208 aa		13.5	□□□□□ -0.25
SREBF1-222	ENST00000583732	DDIAS	Q8IXT1	998 aa		13.5	□□□□□ -0.25
SREBF1-222	ENST00000583732	ZNF611	Q8N823	705 aa		13.5	□□□□□ -0.25
SREBF1-222	ENST00000583732	MAPK1IP1L	Q8NDC0	245 aa		13.5	□□□□□ -0.25
SREBF1-222	ENST00000583732	ACTRT2	Q8TDY3	377 aa		13.5	□□□□□ -0.25
SREBF1-222	ENST00000583732	UBLCP1	Q8WVY7	318 aa	Predicted RBP	13.5	□□□□□ -0.25
SREBF1-222	ENST00000583732	FAM120B	Q96EK7	910 aa	Known RBP	13.5	□□□□□ -0.25
SREBF1-222	ENST00000583732	ZNF764	Q96H86	408 aa	Predicted RBP	13.5	□□□□□ -0.25
SREBF1-222	ENST00000583732	REXO5	Q96IC2	774 aa	Known RBP	13.5	□□□□□ -0.25
SREBF1-222	ENST00000583732	METTL2A	Q96IZ6	378 aa	Known RBP	13.5	□□□□□ -0.25
SREBF1-222	ENST00000583732	GATA5	Q9BWX5	397 aa	Predicted RBP	13.5	□□□□□ -0.25
SREBF1-222	ENST00000583732	HHATL	Q9HCP6	504 aa		13.5	□□□□□ -0.25
SREBF1-222	ENST00000583732	SIRT3	Q9NTG7	399 aa	Predicted RBP	13.5	□□□□□ -0.25
SREBF1-222	ENST00000583732	ACSS1	Q9NUB1	689 aa	Predicted RBP	13.5	□□□□□ -0.25
SREBF1-222	ENST00000583732	NTM	Q9P121	344 aa		13.5	□□□□□ -0.25
SREBF1-222	ENST00000583732	GPR52	Q9Y2T5	361 aa		13.5	□□□□□ -0.25
SREBF1-222	ENST00000583732	SNX8	Q9Y5X2	465 aa		13.5	□□□□□ -0.25
SREBF1-222	ENST00000583732	LSM1	O15116	133 aa	Known RBP	13.49	□□□□□ -0.25
SREBF1-222	ENST00000583732	TBX19	O60806	448 aa		13.49	□□□□□ -0.25
SREBF1-222	ENST00000583732	CHEK2	O96017	543 aa		13.49	□□□□□ -0.25
SREBF1-222	ENST00000583732	HMGN2	P05204	90 aa	Known RBP	13.49	□□□□□ -0.25
SREBF1-222	ENST00000583732	PSMB1	P20618	241 aa	Known RBP	13.49	□□□□□ -0.25
SREBF1-222	ENST00000583732	IL32	P24001	234 aa		13.49	□□□□□ -0.25
SREBF1-222	ENST00000583732	CRHR1	P34998	444 aa		13.49	□□□□□ -0.25
SREBF1-222	ENST00000583732	RPS4X	P62701	263 aa	Known RBP	13.49	□□□□□ -0.25
SREBF1-222	ENST00000583732	TNK1	Q13470	666 aa		13.49	□□□□□ -0.25
SREBF1-222	ENST00000583732	VEZF1	Q14119	521 aa		13.49	□□□□□ -0.25
SREBF1-222	ENST00000583732	CAPRIN1	Q14444	709 aa	Known RBP	13.49	□□□□□ -0.25
SREBF1-222	ENST00000583732	PCLAF	Q15004	111 aa		13.49	□□□□□ -0.25
SREBF1-222	ENST00000583732	NDUFAF6	Q330K2	333 aa		13.49	□□□□□ -0.25
SREBF1-222	ENST00000583732	KANK2	Q63ZY3	851 aa		13.49	□□□□□ -0.25
SREBF1-222	ENST00000583732	GTF2IRD2B	Q6EKJ0	949 aa		13.49	□□□□□ -0.25
SREBF1-222	ENST00000583732	TFAP2E	Q6VUC0	442 aa		13.49	□□□□□ -0.25
SREBF1-222	ENST00000583732	GTF2IRD2	Q86UP8	949 aa		13.49	□□□□□ -0.25
SREBF1-222	ENST00000583732	TUSC5	Q8IXB3	177 aa		13.49	□□□□□ -0.25
SREBF1-222	ENST00000583732	ZNF614	Q8N883	585 aa		13.49	□□□□□ -0.25
SREBF1-222	ENST00000583732	STEAP2	Q8NFT2	490 aa		13.49	□□□□□ -0.25
SREBF1-222	ENST00000583732	RFWD2	Q8NHY2	731 aa		13.49	□□□□□ -0.25
SREBF1-222	ENST00000583732	FBXO27	Q8NI29	283 aa		13.49	□□□□□ -0.25
SREBF1-222	ENST00000583732	EPS8L3	Q8TE67	593 aa	Known RBP	13.49	□□□□□ -0.25
SREBF1-222	ENST00000583732	RNF128	Q8TEB7	428 aa		13.49	□□□□□ -0.25
SREBF1-222	ENST00000583732	NEUROG1	Q92886	237 aa		13.49	□□□□□ -0.25
SREBF1-222	ENST00000583732	TMEM204	Q9BSN7	226 aa		13.49	□□□□□ -0.25
SREBF1-222	ENST00000583732	BTBD2	Q9BX70	525 aa		13.49	□□□□□ -0.25
SREBF1-222	ENST00000583732	ZNF701	Q9NV72	531 aa	Predicted RBP	13.49	□□□□□ -0.25
SREBF1-222	ENST00000583732	CARD8	Q9Y2G2	431 aa		13.49	□□□□□ -0.25
SREBF1-222	ENST00000583732	RNF115	Q9Y4L5	304 aa		13.49	□□□□□ -0.25
SREBF1-222	ENST00000583732	ANK3	Q12955	4377 aa	Known RBP	13.48	□□□□□ -0.25
SREBF1-222	ENST00000583732	PRR14L	Q5THK1	2151 aa		13.48	□□□□□ -0.25
SREBF1-222	ENST00000583732	IGHV3-15	A0A0B4J1V0	119 aa		13.48	□□□□□ -0.25
SREBF1-222	ENST00000583732		A0A1W2PQD3	144 aa		13.48	□□□□□ -0.25
SREBF1-222	ENST00000583732	GCM2	O75603	506 aa	Predicted RBP	13.48	□□□□□ -0.25
SREBF1-222	ENST00000583732	CHRNG	P07510	517 aa		13.48	□□□□□ -0.25
SREBF1-222	ENST00000583732	BCKDHA	P12694	445 aa		13.48	□□□□□ -0.25
SREBF1-222	ENST00000583732	PAX1	P15863	534 aa		13.48	□□□□□ -0.25
SREBF1-222	ENST00000583732	KRT4	P19013	534 aa		13.48	□□□□□ -0.25
SREBF1-222	ENST00000583732	ATP6V1C1	P21283	382 aa		13.48	□□□□□ -0.25
SREBF1-222	ENST00000583732	HPCAL1	P37235	193 aa		13.48	□□□□□ -0.25
SREBF1-222	ENST00000583732	CDKN1A	P38936	164 aa		13.48	□□□□□ -0.25
SREBF1-222	ENST00000583732	TP53BP2	Q13625	1128 aa		13.48	□□□□□ -0.25
SREBF1-222	ENST00000583732	TOMM34	Q15785	309 aa	Predicted RBP	13.48	□□□□□ -0.25
SREBF1-222	ENST00000583732	CDC73	Q6P1J9	531 aa		13.48	□□□□□ -0.25
SREBF1-222	ENST00000583732	ZCCHC12	Q6PEW1	402 aa		13.48	□□□□□ -0.25
SREBF1-222	ENST00000583732	CBLN3	Q6UW01	205 aa		13.48	□□□□□ -0.25
SREBF1-222	ENST00000583732	LRIG3	Q6UXM1	1119 aa		13.48	□□□□□ -0.25
SREBF1-222	ENST00000583732	FCRLA	Q7L513	359 aa		13.48	□□□□□ -0.25
SREBF1-222	ENST00000583732	ATG4D	Q86TL0	474 aa	Predicted RBP	13.48	□□□□□ -0.25
SREBF1-222	ENST00000583732	TMCO5A	Q8N6Q1	288 aa		13.48	□□□□□ -0.25
SREBF1-222	ENST00000583732	BANP	Q8N9N5	519 aa		13.48	□□□□□ -0.25
SREBF1-222	ENST00000583732	OR7A2P	Q8NGA2	310 aa		13.48	□□□□□ -0.25
SREBF1-222	ENST00000583732	AGR3	Q8TD06	166 aa		13.48	□□□□□ -0.25
SREBF1-222	ENST00000583732	TWIST2	Q8WVJ9	160 aa		13.48	□□□□□ -0.25
SREBF1-222	ENST00000583732	OR10A4	Q9H209	315 aa		13.48	□□□□□ -0.25
SREBF1-222	ENST00000583732	MID2	Q9UJV3	735 aa		13.48	□□□□□ -0.25
SREBF1-222	ENST00000583732	ADAM21	Q9UKJ8	722 aa		13.48	□□□□□ -0.25
SREBF1-222	ENST00000583732	DNAJC15	Q9Y5T4	150 aa		13.48	□□□□□ -0.25
SREBF1-222	ENST00000583732	RNF223	E7ERA6	249 aa		13.47	□□□□□ -0.25
SREBF1-222	ENST00000583732	ZNF195	O14628	629 aa		13.47	□□□□□ -0.25
SREBF1-222	ENST00000583732	PIP5K1B	O14986	540 aa		13.47	□□□□□ -0.25
SREBF1-222	ENST00000583732	SCAMP2	O15127	329 aa	Known RBP	13.47	□□□□□ -0.25
SREBF1-222	ENST00000583732	EFNA2	O43921	213 aa		13.47	□□□□□ -0.25
SREBF1-222	ENST00000583732	ADA	P00813	363 aa		13.47	□□□□□ -0.25
SREBF1-222	ENST00000583732	CD3E	P07766	207 aa		13.47	□□□□□ -0.25
SREBF1-222	ENST00000583732	PABPC4L	P0CB38	370 aa	Known RBP	13.47	□□□□□ -0.25
SREBF1-222	ENST00000583732	ELK4	P28324	431 aa		13.47	□□□□□ -0.25
SREBF1-222	ENST00000583732	LCN1	P31025	176 aa		13.47	□□□□□ -0.25
SREBF1-222	ENST00000583732	EIF1	P41567	113 aa	Known RBP	13.47	□□□□□ -0.25
SREBF1-222	ENST00000583732	ASMT	P46597	345 aa		13.47	□□□□□ -0.25
SREBF1-222	ENST00000583732	TAB1	Q15750	504 aa		13.47	□□□□□ -0.25
SREBF1-222	ENST00000583732	CLEC12B	Q2HXU8	276 aa		13.47	□□□□□ -0.25
SREBF1-222	ENST00000583732	TMEM176B	Q3YBM2	270 aa	Predicted RBP	13.47	□□□□□ -0.25
SREBF1-222	ENST00000583732	SPDYE7P	Q495Y7	208 aa		13.47	□□□□□ -0.25
SREBF1-222	ENST00000583732	EXOSC6	Q5RKV6	272 aa	Known RBP	13.47	□□□□□ -0.25
SREBF1-222	ENST00000583732	DCST2	Q5T1A1	773 aa		13.47	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms