RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772	KRT3	P12035	628 aa		4.13	□□□□□ -1.75
MSI2-216	ENST00000582772	NQO1	P15559	274 aa	Known RBP	4.13	□□□□□ -1.75
MSI2-216	ENST00000582772	ATP5D	P30049	168 aa		4.13	□□□□□ -1.75
MSI2-216	ENST00000582772	SSTR1	P30872	391 aa		4.13	□□□□□ -1.75
MSI2-216	ENST00000582772	STX2	P32856	288 aa		4.13	□□□□□ -1.75
MSI2-216	ENST00000582772	SERPINB6	P35237	376 aa		4.13	□□□□□ -1.75
MSI2-216	ENST00000582772	RPA3	P35244	121 aa	Predicted RBP	4.13	□□□□□ -1.75
MSI2-216	ENST00000582772	CETN2	P41208	172 aa		4.13	□□□□□ -1.75
MSI2-216	ENST00000582772	PTGDS	P41222	190 aa		4.13	□□□□□ -1.75
MSI2-216	ENST00000582772	CLDN20	P56880	219 aa		4.13	□□□□□ -1.75
MSI2-216	ENST00000582772	FBXW4	P57775	412 aa		4.13	□□□□□ -1.75
MSI2-216	ENST00000582772	EIF3E	P60228	445 aa	Known RBP	4.13	□□□□□ -1.75
MSI2-216	ENST00000582772	OLR1	P78380	273 aa		4.13	□□□□□ -1.75
MSI2-216	ENST00000582772	XIAP	P98170	497 aa		4.13	□□□□□ -1.75
MSI2-216	ENST00000582772	MSLN	Q13421	630 aa	Predicted RBP	4.13	□□□□□ -1.75
MSI2-216	ENST00000582772	KCNJ11	Q14654	390 aa		4.13	□□□□□ -1.75
MSI2-216	ENST00000582772	NOMO1	Q15155	1222 aa		4.13	□□□□□ -1.75
MSI2-216	ENST00000582772	RASA2	Q15283	850 aa		4.13	□□□□□ -1.75
MSI2-216	ENST00000582772	MMEL1	Q495T6	779 aa		4.13	□□□□□ -1.75
MSI2-216	ENST00000582772	DEFB134	Q4QY38	66 aa		4.13	□□□□□ -1.75
MSI2-216	ENST00000582772	ASRGL1	Q7L266	308 aa		4.13	□□□□□ -1.75
MSI2-216	ENST00000582772	RFX6	Q8HWS3	928 aa		4.13	□□□□□ -1.75
MSI2-216	ENST00000582772	PSTK	Q8IV42	348 aa	Known RBP	4.13	□□□□□ -1.75
MSI2-216	ENST00000582772	PPIL6	Q8IXY8	311 aa		4.13	□□□□□ -1.75
MSI2-216	ENST00000582772	C4orf33	Q8N1A6	199 aa		4.13	□□□□□ -1.75
MSI2-216	ENST00000582772	FITM2	Q8N6M3	262 aa		4.13	□□□□□ -1.75
MSI2-216	ENST00000582772	PQLC3	Q8N755	202 aa		4.13	□□□□□ -1.75
MSI2-216	ENST00000582772	GBP7	Q8N8V2	638 aa	Predicted RBP	4.13	□□□□□ -1.75
MSI2-216	ENST00000582772	FAM71D	Q8N9W8	422 aa		4.13	□□□□□ -1.75
MSI2-216	ENST00000582772	CCDC63	Q8NA47	563 aa		4.13	□□□□□ -1.75
MSI2-216	ENST00000582772	DCAKD	Q8WVC6	231 aa		4.13	□□□□□ -1.75
MSI2-216	ENST00000582772	C10orf82	Q8WW14	230 aa		4.13	□□□□□ -1.75
MSI2-216	ENST00000582772	DYDC1	Q8WWB3	177 aa		4.13	□□□□□ -1.75
MSI2-216	ENST00000582772	ELMO1	Q92556	727 aa		4.13	□□□□□ -1.75
MSI2-216	ENST00000582772	TFAP2C	Q92754	450 aa		4.13	□□□□□ -1.75
MSI2-216	ENST00000582772	UTP4	Q969X6	686 aa	Known RBP	4.13	□□□□□ -1.75
MSI2-216	ENST00000582772	MRRF	Q96E11	262 aa	Known RBP	4.13	□□□□□ -1.75
MSI2-216	ENST00000582772	IMP4	Q96G21	291 aa	Known RBP	4.13	□□□□□ -1.75
MSI2-216	ENST00000582772	PRR25	Q96S07	402 aa		4.13	□□□□□ -1.75
MSI2-216	ENST00000582772	ACAT2	Q9BWD1	397 aa		4.13	□□□□□ -1.75
MSI2-216	ENST00000582772	NSRP1	Q9H0G5	558 aa	Known RBP	4.13	□□□□□ -1.75
MSI2-216	ENST00000582772	SLCO1B3	Q9NPD5	702 aa		4.13	□□□□□ -1.75
MSI2-216	ENST00000582772	ZDHHC3	Q9NYG2	299 aa		4.13	□□□□□ -1.75
MSI2-216	ENST00000582772	VPREB3	Q9UKI3	123 aa		4.13	□□□□□ -1.75
MSI2-216	ENST00000582772	EFR3B	Q9Y2G0	817 aa		4.13	□□□□□ -1.75
MSI2-216	ENST00000582772	ARL2BP	Q9Y2Y0	163 aa		4.13	□□□□□ -1.75
MSI2-216	ENST00000582772	TTLL3	Q9Y4R7	772 aa		4.13	□□□□□ -1.75
MSI2-216	ENST00000582772	SORL1	Q92673	2214 aa		4.12	□□□□□ -1.75
MSI2-216	ENST00000582772	IGHV3OR16-10	A0A075B7F0	116 aa		4.12	□□□□□ -1.75
MSI2-216	ENST00000582772	AGAP5	A6NIR3	686 aa		4.12	□□□□□ -1.75
MSI2-216	ENST00000582772	EDF1	O60869	148 aa	Known RBP	4.12	□□□□□ -1.75
MSI2-216	ENST00000582772	FAM20B	O75063	409 aa		4.12	□□□□□ -1.75
MSI2-216	ENST00000582772	NIPSNAP2	O75323	286 aa		4.12	□□□□□ -1.75
MSI2-216	ENST00000582772	KRT16	P08779	473 aa		4.12	□□□□□ -1.75
MSI2-216	ENST00000582772	FRMD6-AS1	P0C7T7	363 aa		4.12	□□□□□ -1.75
MSI2-216	ENST00000582772	T-ENOL	P0DO92	83 aa		4.12	□□□□□ -1.75
MSI2-216	ENST00000582772	PF4V1	P10720	104 aa		4.12	□□□□□ -1.75
MSI2-216	ENST00000582772	IGHV1-2	P23083	117 aa		4.12	□□□□□ -1.75
MSI2-216	ENST00000582772	HRH2	P25021	359 aa		4.12	□□□□□ -1.75
MSI2-216	ENST00000582772	MSH2	P43246	934 aa		4.12	□□□□□ -1.75
MSI2-216	ENST00000582772	MTNR1B	P49286	362 aa		4.12	□□□□□ -1.75
MSI2-216	ENST00000582772	RNF144A	P50876	292 aa	Predicted RBP	4.12	□□□□□ -1.75
MSI2-216	ENST00000582772	MNAT1	P51948	309 aa		4.12	□□□□□ -1.75
MSI2-216	ENST00000582772	GTF2A1	P52655	376 aa	Predicted RBP	4.12	□□□□□ -1.75
MSI2-216	ENST00000582772	ZNF143	P52747	638 aa	Predicted RBP	4.12	□□□□□ -1.75
MSI2-216	ENST00000582772	SLC18A1	P54219	525 aa		4.12	□□□□□ -1.75
MSI2-216	ENST00000582772	ARL4C	P56559	192 aa		4.12	□□□□□ -1.75
MSI2-216	ENST00000582772	DPYSL3	Q14195	570 aa		4.12	□□□□□ -1.75
MSI2-216	ENST00000582772	ARL13A	Q5H913	290 aa	Predicted RBP	4.12	□□□□□ -1.75
MSI2-216	ENST00000582772	NEPRO	Q6NW34	567 aa		4.12	□□□□□ -1.75
MSI2-216	ENST00000582772	SCYL2	Q6P3W7	929 aa		4.12	□□□□□ -1.75
MSI2-216	ENST00000582772	BRD3OS	Q6XYD6	125 aa		4.12	□□□□□ -1.75
MSI2-216	ENST00000582772	PPP1R21	Q6ZMI0	780 aa		4.12	□□□□□ -1.75
MSI2-216	ENST00000582772	CENPU	Q71F23	418 aa		4.12	□□□□□ -1.75
MSI2-216	ENST00000582772	GLT6D1	Q7Z4J2	308 aa		4.12	□□□□□ -1.75
MSI2-216	ENST00000582772	ASPG	Q86U10	573 aa		4.12	□□□□□ -1.75
MSI2-216	ENST00000582772	GGN	Q86UU5	652 aa		4.12	□□□□□ -1.75
MSI2-216	ENST00000582772	PLD3	Q8IV08	490 aa		4.12	□□□□□ -1.75
MSI2-216	ENST00000582772	ZBED8	Q8IZ13	594 aa		4.12	□□□□□ -1.75
MSI2-216	ENST00000582772	TAGAP	Q8N103	731 aa		4.12	□□□□□ -1.75
MSI2-216	ENST00000582772	NKAP	Q8N5F7	415 aa	Known RBP	4.12	□□□□□ -1.75
MSI2-216	ENST00000582772	CLDN19	Q8N6F1	224 aa		4.12	□□□□□ -1.75
MSI2-216	ENST00000582772	ZNF433	Q8N7K0	673 aa	Predicted RBP	4.12	□□□□□ -1.75
MSI2-216	ENST00000582772	KCTD6	Q8NC69	237 aa		4.12	□□□□□ -1.75
MSI2-216	ENST00000582772	SLC16A11	Q8NCK7	471 aa		4.12	□□□□□ -1.75
MSI2-216	ENST00000582772	FBXO36	Q8NEA4	188 aa		4.12	□□□□□ -1.75
MSI2-216	ENST00000582772	NUP37	Q8NFH4	326 aa		4.12	□□□□□ -1.75
MSI2-216	ENST00000582772	RFWD2	Q8NHY2	731 aa		4.12	□□□□□ -1.75
MSI2-216	ENST00000582772	SMPDL3A	Q92484	453 aa		4.12	□□□□□ -1.75
MSI2-216	ENST00000582772	JADE3	Q92613	823 aa		4.12	□□□□□ -1.75
MSI2-216	ENST00000582772	ZNF75CP	Q92670	426 aa	Predicted RBP	4.12	□□□□□ -1.75
MSI2-216	ENST00000582772	KCNJ9	Q92806	393 aa		4.12	□□□□□ -1.75
MSI2-216	ENST00000582772	TSGA13	Q96PP4	275 aa		4.12	□□□□□ -1.75
MSI2-216	ENST00000582772	PAFAH2	Q99487	392 aa		4.12	□□□□□ -1.75
MSI2-216	ENST00000582772	PITX2	Q99697	317 aa		4.12	□□□□□ -1.75
MSI2-216	ENST00000582772	PAIP2	Q9BPZ3	127 aa	Known RBP	4.12	□□□□□ -1.75
MSI2-216	ENST00000582772	MACROD1	Q9BQ69	325 aa		4.12	□□□□□ -1.75
MSI2-216	ENST00000582772	SNRNP25	Q9BV90	132 aa	Known RBP	4.12	□□□□□ -1.75
MSI2-216	ENST00000582772	OSBPL11	Q9BXB4	747 aa		4.12	□□□□□ -1.75
MSI2-216	ENST00000582772	FRMD8P1	Q9BZ68	369 aa	Predicted RBP	4.12	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms