RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 ALAS2P22557 587 aa20.94■□□□□ 0.94
CCDC47-204ENST00000582252 VBP1P61758 197 aa20.94■□□□□ 0.94
CCDC47-204ENST00000582252 TUBA1BP68363 451 aa20.94■□□□□ 0.94
CCDC47-204ENST00000582252 MED22Q15528 200 aa20.94■□□□□ 0.94
CCDC47-204ENST00000582252 TUBA1AQ71U36 451 aa20.94■□□□□ 0.94
CCDC47-204ENST00000582252 SLCO6A1Q86UG4 719 aa20.94■□□□□ 0.94
CCDC47-204ENST00000582252 Q8N9G6 341 aaPredicted RBP20.94■□□□□ 0.94
CCDC47-204ENST00000582252 OIT3Q8WWZ8 545 aa20.94■□□□□ 0.94
CCDC47-204ENST00000582252 SLC41A2Q96JW4 573 aa20.94■□□□□ 0.94
CCDC47-204ENST00000582252 ZNF582Q96NG8 517 aaPredicted RBP20.94■□□□□ 0.94
CCDC47-204ENST00000582252 PTCHD1Q96NR3 888 aa20.94■□□□□ 0.94
CCDC47-204ENST00000582252 CBLCQ9ULV8 474 aa20.94■□□□□ 0.94
CCDC47-204ENST00000582252 CFL2Q9Y281 166 aa20.94■□□□□ 0.94
CCDC47-204ENST00000582252 TMEM184BQ9Y519 407 aaPredicted RBP20.94■□□□□ 0.94
CCDC47-204ENST00000582252 OTOGLQ3ZCN5 2332 aa20.94■□□□□ 0.94
CCDC47-204ENST00000582252 H3BMH7 237 aa20.93■□□□□ 0.94
CCDC47-204ENST00000582252 PIP5K1CO60331 668 aa20.93■□□□□ 0.94
CCDC47-204ENST00000582252 RAB36O95755 333 aa20.93■□□□□ 0.94
CCDC47-204ENST00000582252 PNLIPP16233 465 aa20.93■□□□□ 0.94
CCDC47-204ENST00000582252 CALRP27797 417 aaKnown RBP20.93■□□□□ 0.94
CCDC47-204ENST00000582252 UGT2B10P36537 528 aa20.93■□□□□ 0.94
CCDC47-204ENST00000582252 ENTPD1P49961 510 aa20.93■□□□□ 0.94
CCDC47-204ENST00000582252 ATP12AP54707 1039 aa20.93■□□□□ 0.94
CCDC47-204ENST00000582252 LSM3P62310 102 aaKnown RBP20.93■□□□□ 0.94
CCDC47-204ENST00000582252 C1DQ13901 141 aaKnown RBP20.93■□□□□ 0.94
CCDC47-204ENST00000582252 ZNF829Q3KNS6 432 aaPredicted RBP20.93■□□□□ 0.94
CCDC47-204ENST00000582252 QSOX2Q6ZRP7 698 aa20.93■□□□□ 0.94
CCDC47-204ENST00000582252 ZAR1Q86SH2 424 aa20.93■□□□□ 0.94
CCDC47-204ENST00000582252 ADCK1Q86TW2 530 aa20.93■□□□□ 0.94
CCDC47-204ENST00000582252 POGLUT1Q8NBL1 392 aa20.93■□□□□ 0.94
CCDC47-204ENST00000582252 OR8D4Q8NGM9 314 aa20.93■□□□□ 0.94
CCDC47-204ENST00000582252 C16orf52Q8NHV5 167 aa20.93■□□□□ 0.94
CCDC47-204ENST00000582252 RNF217Q8TC41 542 aa20.93■□□□□ 0.94
CCDC47-204ENST00000582252 RFKQ969G6 155 aa20.93■□□□□ 0.94
CCDC47-204ENST00000582252 ZHX1-C8orf76Q96EF9 292 aa20.93■□□□□ 0.94
CCDC47-204ENST00000582252 LANCL2Q9NS86 450 aa20.93■□□□□ 0.94
CCDC47-204ENST00000582252 MED31Q9Y3C7 131 aa20.93■□□□□ 0.94
CCDC47-204ENST00000582252 MAU2Q9Y6X3 613 aa20.93■□□□□ 0.94
CCDC47-204ENST00000582252 ASCC3Q8N3C0 2202 aaKnown RBP20.93■□□□□ 0.94
CCDC47-204ENST00000582252 UNC119BA6NIH7 251 aa20.92■□□□□ 0.94
CCDC47-204ENST00000582252 HRKO00198 91 aa20.92■□□□□ 0.94
CCDC47-204ENST00000582252 CHP2O43745 196 aa20.92■□□□□ 0.94
CCDC47-204ENST00000582252 PRKCDQ05655 676 aa20.92■□□□□ 0.94
CCDC47-204ENST00000582252 FGFBP1Q14512 234 aa20.92■□□□□ 0.94
CCDC47-204ENST00000582252 PGGHGQ32M88 737 aa20.92■□□□□ 0.94
CCDC47-204ENST00000582252 SNAP47Q5SQN1 464 aa20.92■□□□□ 0.94
CCDC47-204ENST00000582252 TCEAL6Q6IPX3 200 aa20.92■□□□□ 0.94
CCDC47-204ENST00000582252 NPSR1Q6W5P4 371 aa20.92■□□□□ 0.94
CCDC47-204ENST00000582252 MEX3DQ86XN8 651 aaKnown RBP20.92■□□□□ 0.94
CCDC47-204ENST00000582252 SLC34A3Q8N130 599 aa20.92■□□□□ 0.94
CCDC47-204ENST00000582252 EID2Q8N6I1 236 aa20.92■□□□□ 0.94
CCDC47-204ENST00000582252 ZNF615Q8N8J6 731 aa20.92■□□□□ 0.94
CCDC47-204ENST00000582252 RCBTB1Q8NDN9 531 aa20.92■□□□□ 0.94
CCDC47-204ENST00000582252 OR2T33Q8NG76 320 aa20.92■□□□□ 0.94
CCDC47-204ENST00000582252 OR52L1Q8NGH7 329 aa20.92■□□□□ 0.94
CCDC47-204ENST00000582252 NDNFQ8TB73 568 aa20.92■□□□□ 0.94
CCDC47-204ENST00000582252 TCEAL3Q969E4 200 aa20.92■□□□□ 0.94
CCDC47-204ENST00000582252 MGLLQ99685 303 aa20.92■□□□□ 0.94
CCDC47-204ENST00000582252 DIMT1Q9UNQ2 313 aaKnown RBP20.92■□□□□ 0.94
CCDC47-204ENST00000582252 NUP210LQ5VU65 1888 aa20.92■□□□□ 0.94
CCDC47-204ENST00000582252 MUC6Q6W4X9 2439 aa20.92■□□□□ 0.94
CCDC47-204ENST00000582252 SYNDIG1LA6NDD5 238 aa20.92■□□□□ 0.94
CCDC47-204ENST00000582252 C17orf105B2RV13 164 aa20.92■□□□□ 0.94
CCDC47-204ENST00000582252 DSCR3O14972 297 aa20.92■□□□□ 0.94
CCDC47-204ENST00000582252 HSMCR30P0CW71 290 aa20.92■□□□□ 0.94
CCDC47-204ENST00000582252 FBLP22087 321 aaKnown RBP20.92■□□□□ 0.94
CCDC47-204ENST00000582252 RGS6P49758 472 aa20.92■□□□□ 0.94
CCDC47-204ENST00000582252 DSG2Q14126 1118 aa20.92■□□□□ 0.94
CCDC47-204ENST00000582252 CPEB4Q17RY0 729 aaKnown RBP eCLIP20.92■□□□□ 0.94
CCDC47-204ENST00000582252 KBTBD8Q8NFY9 601 aa20.92■□□□□ 0.94
CCDC47-204ENST00000582252 DYNC2LI1Q8TCX1 351 aa20.92■□□□□ 0.94
CCDC47-204ENST00000582252 BRIX1Q8TDN6 353 aaKnown RBP20.92■□□□□ 0.94
CCDC47-204ENST00000582252 CNOT9Q92600 299 aaKnown RBP20.92■□□□□ 0.94
CCDC47-204ENST00000582252 NAT6Q93015 286 aa20.92■□□□□ 0.94
CCDC47-204ENST00000582252 MRPS18AQ9NVS2 196 aaKnown RBP20.92■□□□□ 0.94
CCDC47-204ENST00000582252 CHCHD3Q9NX63 227 aaKnown RBP20.92■□□□□ 0.94
CCDC47-204ENST00000582252 ZNF223Q9UK11 482 aaPredicted RBP20.92■□□□□ 0.94
CCDC47-204ENST00000582252 PCDHGB2Q9Y5G2 931 aa20.92■□□□□ 0.94
CCDC47-204ENST00000582252 LNP1A1A4G5 178 aa20.91■□□□□ 0.94
CCDC47-204ENST00000582252 KDM4EB2RXH2 506 aaPredicted RBP20.91■□□□□ 0.94
CCDC47-204ENST00000582252 CCRL2O00421 344 aa20.91■□□□□ 0.94
CCDC47-204ENST00000582252 MYL12BO14950 172 aa20.91■□□□□ 0.94
CCDC47-204ENST00000582252 TOX3O15405 576 aaPredicted RBP20.91■□□□□ 0.94
CCDC47-204ENST00000582252 IGKV1D-16P01601 117 aa20.91■□□□□ 0.94
CCDC47-204ENST00000582252 CT45A8P0DMV1 189 aa20.91■□□□□ 0.94
CCDC47-204ENST00000582252 CT45A9P0DMV2 189 aa20.91■□□□□ 0.94
CCDC47-204ENST00000582252 GADD45AP24522 165 aa20.91■□□□□ 0.94
CCDC47-204ENST00000582252 CSF2RBP32927 897 aa20.91■□□□□ 0.94
CCDC47-204ENST00000582252 RBM34P42696 430 aaKnown RBP20.91■□□□□ 0.94
CCDC47-204ENST00000582252 NCS1P62166 190 aa20.91■□□□□ 0.94
CCDC47-204ENST00000582252 CFHR1Q03591 330 aa20.91■□□□□ 0.94
CCDC47-204ENST00000582252 RAB40BQ12829 278 aa20.91■□□□□ 0.94
CCDC47-204ENST00000582252 MINDY4Q4G0A6 757 aa20.91■□□□□ 0.94
CCDC47-204ENST00000582252 CT45A2Q5DJT8 189 aa20.91■□□□□ 0.94
CCDC47-204ENST00000582252 USP43Q70EL4 1123 aa20.91■□□□□ 0.94
CCDC47-204ENST00000582252 PROKR2Q8NFJ6 384 aa20.91■□□□□ 0.94
CCDC47-204ENST00000582252 OR4N2Q8NGD1 307 aa20.91■□□□□ 0.94
CCDC47-204ENST00000582252 OR1L3Q8NH93 324 aa20.91■□□□□ 0.94
CCDC47-204ENST00000582252 FGF11Q92914 225 aa20.91■□□□□ 0.94
CCDC47-204ENST00000582252 CCDC74AQ96AQ1 378 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms