RNA–Protein interactions for RNA: ENST00000581868.1

RNF43-205, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,610 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-205ENST00000581868 CD180Q99467 661 aa12.74□□□□□ -0.37
RNF43-205ENST00000581868 IFT27Q9BW83 186 aa12.74□□□□□ -0.37
RNF43-205ENST00000581868 KRCC1Q9NPI7 259 aaPredicted RBP12.74□□□□□ -0.37
RNF43-205ENST00000581868 MRPS7Q9Y2R9 242 aaKnown RBP12.74□□□□□ -0.37
RNF43-205ENST00000581868 LTBP2Q14767 1821 aa12.74□□□□□ -0.37
RNF43-205ENST00000581868 UNC80Q8N2C7 3258 aa12.73□□□□□ -0.37
RNF43-205ENST00000581868 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.73□□□□□ -0.37
RNF43-205ENST00000581868 ZNF888P0CJ79 500 aaPredicted RBP12.73□□□□□ -0.37
RNF43-205ENST00000581868 CLUP10909 449 aa12.73□□□□□ -0.37
RNF43-205ENST00000581868 AHCYP23526 432 aa12.73□□□□□ -0.37
RNF43-205ENST00000581868 THBS2P35442 1172 aa12.73□□□□□ -0.37
RNF43-205ENST00000581868 ZNF136P52737 540 aa12.73□□□□□ -0.37
RNF43-205ENST00000581868 PRMT2P55345 433 aa12.73□□□□□ -0.37
RNF43-205ENST00000581868 SIM1P81133 766 aaPredicted RBP12.73□□□□□ -0.37
RNF43-205ENST00000581868 MAPK14Q16539 360 aa12.73□□□□□ -0.37
RNF43-205ENST00000581868 OAFQ86UD1 273 aa12.73□□□□□ -0.37
RNF43-205ENST00000581868 CYB561A3Q8NBI2 242 aa12.73□□□□□ -0.37
RNF43-205ENST00000581868 OR4E2Q8NGC2 313 aa12.73□□□□□ -0.37
RNF43-205ENST00000581868 TRMT10AQ8TBZ6 339 aaKnown RBP12.73□□□□□ -0.37
RNF43-205ENST00000581868 ZNF707Q96C28 371 aaPredicted RBP12.73□□□□□ -0.37
RNF43-205ENST00000581868 HYLS1Q96M11 299 aa12.73□□□□□ -0.37
RNF43-205ENST00000581868 HS6ST2Q96MM7 605 aa12.73□□□□□ -0.37
RNF43-205ENST00000581868 UBL7Q96S82 380 aaPredicted RBP12.73□□□□□ -0.37
RNF43-205ENST00000581868 PRSS27Q9BQR3 290 aa12.73□□□□□ -0.37
RNF43-205ENST00000581868 FOLH1BQ9HBA9 442 aa12.73□□□□□ -0.37
RNF43-205ENST00000581868 PHF11Q9UIL8 331 aa12.73□□□□□ -0.37
RNF43-205ENST00000581868 CACNG2Q9Y698 323 aa12.73□□□□□ -0.37
RNF43-205ENST00000581868 A0A1W2PQ72 361 aa12.73□□□□□ -0.37
RNF43-205ENST00000581868 SLC9B1P1A6NJY1 282 aa12.73□□□□□ -0.37
RNF43-205ENST00000581868 CHP2O43745 196 aa12.73□□□□□ -0.37
RNF43-205ENST00000581868 F8A1P23610 371 aa12.73□□□□□ -0.37
RNF43-205ENST00000581868 BDH1Q02338 343 aa12.73□□□□□ -0.37
RNF43-205ENST00000581868 FGL2Q14314 439 aa12.73□□□□□ -0.37
RNF43-205ENST00000581868 GALEQ14376 348 aa12.73□□□□□ -0.37
RNF43-205ENST00000581868 FAM78AQ5JUQ0 283 aa12.73□□□□□ -0.37
RNF43-205ENST00000581868 AGBL4Q5VU57 503 aa12.73□□□□□ -0.37
RNF43-205ENST00000581868 HEPHL1Q6MZM0 1159 aa12.73□□□□□ -0.37
RNF43-205ENST00000581868 THSD4Q6ZMP0 1018 aa12.73□□□□□ -0.37
RNF43-205ENST00000581868 ZNF767PQ75MW2 155 aa12.73□□□□□ -0.37
RNF43-205ENST00000581868 REM2Q8IYK8 340 aaPredicted RBP12.73□□□□□ -0.37
RNF43-205ENST00000581868 LRRC25Q8N386 305 aaPredicted RBP12.73□□□□□ -0.37
RNF43-205ENST00000581868 LRRC17Q8N6Y2 441 aa12.73□□□□□ -0.37
RNF43-205ENST00000581868 C17orf47Q8NEP4 570 aa12.73□□□□□ -0.37
RNF43-205ENST00000581868 OR13C5Q8NGS8 318 aa12.73□□□□□ -0.37
RNF43-205ENST00000581868 ABHD4Q8TB40 342 aa12.73□□□□□ -0.37
RNF43-205ENST00000581868 ZCCHC10Q8TBK6 192 aa12.73□□□□□ -0.37
RNF43-205ENST00000581868 SPPL3Q8TCT6 385 aa12.73□□□□□ -0.37
RNF43-205ENST00000581868 PTP4A1Q93096 173 aa12.73□□□□□ -0.37
RNF43-205ENST00000581868 C4orf36Q96KX1 117 aa12.73□□□□□ -0.37
RNF43-205ENST00000581868 MS4A4EQ96PG1 132 aa12.73□□□□□ -0.37
RNF43-205ENST00000581868 PHPT1Q9NRX4 125 aaPredicted RBP12.73□□□□□ -0.37
RNF43-205ENST00000581868 DNAH14Q0VDD8 3507 aa12.72□□□□□ -0.37
RNF43-205ENST00000581868 MDC1Q14676 2089 aaKnown RBP12.72□□□□□ -0.37
RNF43-205ENST00000581868 A0A1W2PP55 124 aa12.72□□□□□ -0.37
RNF43-205ENST00000581868 PRR23D1E9PI22 279 aaPredicted RBP12.72□□□□□ -0.37
RNF43-205ENST00000581868 BHLHE40O14503 412 aa12.72□□□□□ -0.37
RNF43-205ENST00000581868 HYAL3O43820 417 aaPredicted RBP12.72□□□□□ -0.37
RNF43-205ENST00000581868 PRICKLE3O43900 615 aaPredicted RBP12.72□□□□□ -0.37
RNF43-205ENST00000581868 NOS1APO75052 506 aaPredicted RBP12.72□□□□□ -0.37
RNF43-205ENST00000581868 DNAJB6O75190 326 aa12.72□□□□□ -0.37
RNF43-205ENST00000581868 DHFRP00374 187 aa12.72□□□□□ -0.37
RNF43-205ENST00000581868 MT-ND5P03915 603 aa12.72□□□□□ -0.37
RNF43-205ENST00000581868 GYPBP06028 91 aa12.72□□□□□ -0.37
RNF43-205ENST00000581868 HNRNPA1P09651 372 aaKnown RBP eCLIP12.72□□□□□ -0.37
RNF43-205ENST00000581868 CD3GP09693 182 aa12.72□□□□□ -0.37
RNF43-205ENST00000581868 PRR23D2P0DMB1 279 aaPredicted RBP12.72□□□□□ -0.37
RNF43-205ENST00000581868 SAGP10523 405 aaPredicted RBP12.72□□□□□ -0.37
RNF43-205ENST00000581868 GALP22466 123 aa12.72□□□□□ -0.37
RNF43-205ENST00000581868 HTR2AP28223 471 aa12.72□□□□□ -0.37
RNF43-205ENST00000581868 NOS3P29474 1203 aa12.72□□□□□ -0.37
RNF43-205ENST00000581868 CMPK1P30085 196 aa12.72□□□□□ -0.37
RNF43-205ENST00000581868 UQCRC1P31930 480 aa12.72□□□□□ -0.37
RNF43-205ENST00000581868 RFX3P48380 749 aa12.72□□□□□ -0.37
RNF43-205ENST00000581868 BTG1P62324 171 aa12.72□□□□□ -0.37
RNF43-205ENST00000581868 RFPL4BQ6ZWI9 263 aa12.72□□□□□ -0.37
RNF43-205ENST00000581868 RANBP3LQ86VV4 465 aaPredicted RBP12.72□□□□□ -0.37
RNF43-205ENST00000581868 ELMOD2Q8IZ81 293 aa12.72□□□□□ -0.37
RNF43-205ENST00000581868 C9orf62Q8N4C0 152 aa12.72□□□□□ -0.37
RNF43-205ENST00000581868 HDDC3Q8N4P3 179 aa12.72□□□□□ -0.37
RNF43-205ENST00000581868 MFSD9Q8NBP5 474 aa12.72□□□□□ -0.37
RNF43-205ENST00000581868 OR13C2Q8NGS9 318 aa12.72□□□□□ -0.37
RNF43-205ENST00000581868 OR51A7Q8NH64 312 aa12.72□□□□□ -0.37
RNF43-205ENST00000581868 BRIX1Q8TDN6 353 aaKnown RBP12.72□□□□□ -0.37
RNF43-205ENST00000581868 TMEM239Q8WW34 195 aa12.72□□□□□ -0.37
RNF43-205ENST00000581868 ZFP3Q96NJ6 502 aa12.72□□□□□ -0.37
RNF43-205ENST00000581868 TEAD3Q99594 435 aa12.72□□□□□ -0.37
RNF43-205ENST00000581868 NDC1Q9BTX1 674 aa12.72□□□□□ -0.37
RNF43-205ENST00000581868 JAM3Q9BX67 310 aa12.72□□□□□ -0.37
RNF43-205ENST00000581868 RAB11FIP5Q9BXF6 653 aa12.72□□□□□ -0.37
RNF43-205ENST00000581868 ADAP2Q9NPF8 381 aa12.72□□□□□ -0.37
RNF43-205ENST00000581868 FBXO34Q9NWN3 711 aa12.72□□□□□ -0.37
RNF43-205ENST00000581868 FBXL4Q9UKA2 621 aa12.72□□□□□ -0.37
RNF43-205ENST00000581868 A0A0B4J203 849 aa12.72□□□□□ -0.37
RNF43-205ENST00000581868 TRAPPC13A5PLN9 417 aa12.72□□□□□ -0.37
RNF43-205ENST00000581868 BTN3A3O00478 584 aa12.72□□□□□ -0.37
RNF43-205ENST00000581868 FZD7O75084 574 aa12.72□□□□□ -0.37
RNF43-205ENST00000581868 RBMS1P29558 406 aaKnown RBP12.72□□□□□ -0.37
RNF43-205ENST00000581868 BTCP35070 178 aa12.72□□□□□ -0.37
RNF43-205ENST00000581868 OR12D2P58182 307 aa12.72□□□□□ -0.37
RNF43-205ENST00000581868 C19orf57Q0VDD7 668 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms