RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 RAET1EQ8TD07 263 aa3.45□□□□□ -1.86
SMCHD1-205ENST00000581383 SPRYD4Q8WW59 207 aaPredicted RBP3.45□□□□□ -1.86
SMCHD1-205ENST00000581383 RPL3LQ92901 407 aaKnown RBP3.45□□□□□ -1.86
SMCHD1-205ENST00000581383 SLC25A38Q96DW6 304 aa3.45□□□□□ -1.86
SMCHD1-205ENST00000581383 NOL4LQ96MY1 436 aaPredicted RBP3.45□□□□□ -1.86
SMCHD1-205ENST00000581383 TTC25Q96NG3 672 aa3.45□□□□□ -1.86
SMCHD1-205ENST00000581383 OR5B2Q96R09 309 aa3.45□□□□□ -1.86
SMCHD1-205ENST00000581383 TMEM117Q9H0C3 514 aa3.45□□□□□ -1.86
SMCHD1-205ENST00000581383 CAB39LQ9H9S4 337 aa3.45□□□□□ -1.86
SMCHD1-205ENST00000581383 TNFRSF19Q9NS68 423 aa3.45□□□□□ -1.86
SMCHD1-205ENST00000581383 GNG12Q9UBI6 72 aa3.45□□□□□ -1.86
SMCHD1-205ENST00000581383 CLEC4EQ9ULY5 219 aa3.45□□□□□ -1.86
SMCHD1-205ENST00000581383 FLVCR1Q9Y5Y0 555 aa3.45□□□□□ -1.86
SMCHD1-205ENST00000581383 IGLV8-61A0A075B6I0 122 aa3.44□□□□□ -1.86
SMCHD1-205ENST00000581383 BCAS1O75363 584 aaPredicted RBP3.44□□□□□ -1.86
SMCHD1-205ENST00000581383 GPX5O75715 221 aa3.44□□□□□ -1.86
SMCHD1-205ENST00000581383 IGKV3-15P01624 115 aa3.44□□□□□ -1.86
SMCHD1-205ENST00000581383 TPSB2P20231 275 aa3.44□□□□□ -1.86
SMCHD1-205ENST00000581383 SERPINA2P20848 420 aa3.44□□□□□ -1.86
SMCHD1-205ENST00000581383 UQCRC2P22695 453 aa3.44□□□□□ -1.86
SMCHD1-205ENST00000581383 CHI3L1P36222 383 aaPredicted RBP3.44□□□□□ -1.86
SMCHD1-205ENST00000581383 RPL29P47914 159 aaKnown RBP3.44□□□□□ -1.86
SMCHD1-205ENST00000581383 STARP49675 285 aa3.44□□□□□ -1.86
SMCHD1-205ENST00000581383 IGLV3-21P80748 117 aaPredicted RBP3.44□□□□□ -1.86
SMCHD1-205ENST00000581383 OTUD4Q01804 1114 aaKnown RBP3.44□□□□□ -1.86
SMCHD1-205ENST00000581383 SELPLGQ14242 412 aa3.44□□□□□ -1.86
SMCHD1-205ENST00000581383 LAGE3Q14657 143 aa3.44□□□□□ -1.86
SMCHD1-205ENST00000581383 TPSAB1Q15661 275 aa3.44□□□□□ -1.86
SMCHD1-205ENST00000581383 PDK4Q16654 411 aa3.44□□□□□ -1.86
SMCHD1-205ENST00000581383 TATDN3Q17R31 274 aa3.44□□□□□ -1.86
SMCHD1-205ENST00000581383 SLC5A12Q1EHB4 618 aa3.44□□□□□ -1.86
SMCHD1-205ENST00000581383 GGTA1PQ4G0N0 100 aa3.44□□□□□ -1.86
SMCHD1-205ENST00000581383 ACOT1Q86TX2 421 aa3.44□□□□□ -1.86
SMCHD1-205ENST00000581383 APOBEC3FQ8IUX4 373 aaKnown RBP3.44□□□□□ -1.86
SMCHD1-205ENST00000581383 FBXO16Q8IX29 292 aaPredicted RBP3.44□□□□□ -1.86
SMCHD1-205ENST00000581383 AENQ8WTP8 325 aaKnown RBP3.44□□□□□ -1.86
SMCHD1-205ENST00000581383 SLC6A7Q99884 636 aa3.44□□□□□ -1.86
SMCHD1-205ENST00000581383 DUSP16Q9BY84 665 aa3.44□□□□□ -1.86
SMCHD1-205ENST00000581383 CRNKL1Q9BZJ0 848 aaKnown RBP3.44□□□□□ -1.86
SMCHD1-205ENST00000581383 PPDPFQ9H3Y8 114 aa3.44□□□□□ -1.86
SMCHD1-205ENST00000581383 RMND5AQ9H871 391 aa3.44□□□□□ -1.86
SMCHD1-205ENST00000581383 SPRR3Q9UBC9 169 aa3.44□□□□□ -1.86
SMCHD1-205ENST00000581383 KLHL21Q9UJP4 597 aa3.44□□□□□ -1.86
SMCHD1-205ENST00000581383 MOKQ9UQ07 419 aa3.44□□□□□ -1.86
SMCHD1-205ENST00000581383 WDR45Q9Y484 360 aa3.44□□□□□ -1.86
SMCHD1-205ENST00000581383 OARD1Q9Y530 152 aa3.44□□□□□ -1.86
SMCHD1-205ENST00000581383 KLF18A0A0U1RQI7 1052 aa3.43□□□□□ -1.86
SMCHD1-205ENST00000581383 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.43□□□□□ -1.86
SMCHD1-205ENST00000581383 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.43□□□□□ -1.86
SMCHD1-205ENST00000581383 DHRS7CA6NNS2 312 aa3.43□□□□□ -1.86
SMCHD1-205ENST00000581383 K7ENP7 123 aa3.43□□□□□ -1.86
SMCHD1-205ENST00000581383 OR7A17O14581 309 aa3.43□□□□□ -1.86
SMCHD1-205ENST00000581383 TBX19O60806 448 aa3.43□□□□□ -1.86
SMCHD1-205ENST00000581383 CABYRO75952 493 aa3.43□□□□□ -1.86
SMCHD1-205ENST00000581383 KIAA0754O94854 1291 aa3.43□□□□□ -1.86
SMCHD1-205ENST00000581383 CA1P00915 261 aaPredicted RBP3.43□□□□□ -1.86
SMCHD1-205ENST00000581383 UGT2B4P06133 528 aa3.43□□□□□ -1.86
SMCHD1-205ENST00000581383 CPN1P15169 458 aa3.43□□□□□ -1.86
SMCHD1-205ENST00000581383 RPA2P15927 270 aa3.43□□□□□ -1.86
SMCHD1-205ENST00000581383 TBXA2RP21731 343 aa3.43□□□□□ -1.86
SMCHD1-205ENST00000581383 CALB2P22676 271 aa3.43□□□□□ -1.86
SMCHD1-205ENST00000581383 ADSSP30520 456 aa3.43□□□□□ -1.86
SMCHD1-205ENST00000581383 UGT1A3P35503 534 aa3.43□□□□□ -1.86
SMCHD1-205ENST00000581383 HPCAL1P37235 193 aa3.43□□□□□ -1.86
SMCHD1-205ENST00000581383 IFNAR2P48551 515 aa3.43□□□□□ -1.86
SMCHD1-205ENST00000581383 RGS4P49798 205 aa3.43□□□□□ -1.86
SMCHD1-205ENST00000581383 RPS8P62241 208 aaKnown RBP3.43□□□□□ -1.86
SMCHD1-205ENST00000581383 RIPPLY1Q0D2K3 151 aa3.43□□□□□ -1.86
SMCHD1-205ENST00000581383 KIAA0040Q15053 153 aa3.43□□□□□ -1.86
SMCHD1-205ENST00000581383 TAF7Q15545 349 aaPredicted RBP3.43□□□□□ -1.86
SMCHD1-205ENST00000581383 KRTAP13-3Q3SY46 172 aa3.43□□□□□ -1.86
SMCHD1-205ENST00000581383 TIGITQ495A1 244 aa3.43□□□□□ -1.86
SMCHD1-205ENST00000581383 LCE3EQ5T5B0 92 aa3.43□□□□□ -1.86
SMCHD1-205ENST00000581383 OR5M10Q6IEU7 315 aa3.43□□□□□ -1.86
SMCHD1-205ENST00000581383 PYHIN1Q6K0P9 492 aa3.43□□□□□ -1.86
SMCHD1-205ENST00000581383 FAHD2BQ6P2I3 314 aaPredicted RBP3.43□□□□□ -1.86
SMCHD1-205ENST00000581383 KCNIP4Q6PIL6 250 aa3.43□□□□□ -1.86
SMCHD1-205ENST00000581383 SLC38A6Q8IZM9 456 aa3.43□□□□□ -1.86
SMCHD1-205ENST00000581383 FBXL16Q8N461 479 aa3.43□□□□□ -1.86
SMCHD1-205ENST00000581383 ZNF540Q8NDQ6 660 aa3.43□□□□□ -1.86
SMCHD1-205ENST00000581383 GMCL1P1Q8NEA9 526 aa3.43□□□□□ -1.86
SMCHD1-205ENST00000581383 CTNNBL1Q8WYA6 563 aaPredicted RBP3.43□□□□□ -1.86
SMCHD1-205ENST00000581383 FAF2Q96CS3 445 aa3.43□□□□□ -1.86
SMCHD1-205ENST00000581383 FAHD2AQ96GK7 314 aa3.43□□□□□ -1.86
SMCHD1-205ENST00000581383 C12orf66Q96MD2 445 aa3.43□□□□□ -1.86
SMCHD1-205ENST00000581383 CYP2S1Q96SQ9 504 aa3.43□□□□□ -1.86
SMCHD1-205ENST00000581383 KIR2DL4Q99706 377 aa3.43□□□□□ -1.86
SMCHD1-205ENST00000581383 ELOVL3Q9HB03 270 aa3.43□□□□□ -1.86
SMCHD1-205ENST00000581383 VNN3Q9NY84 501 aa3.43□□□□□ -1.86
SMCHD1-205ENST00000581383 APOBEC3BQ9UH17 382 aaKnown RBP3.43□□□□□ -1.86
SMCHD1-205ENST00000581383 RIMS3Q9UJD0 308 aa3.43□□□□□ -1.86
SMCHD1-205ENST00000581383 MAD1L1Q9Y6D9 718 aa3.43□□□□□ -1.86
SMCHD1-205ENST00000581383 FRMPD4Q14CM0 1322 aa3.43□□□□□ -1.86
SMCHD1-205ENST00000581383 PGCP20142 388 aa3.42□□□□□ -1.86
SMCHD1-205ENST00000581383 VDAC1P21796 283 aa3.42□□□□□ -1.86
SMCHD1-205ENST00000581383 OR3A4PP47883 348 aa3.42□□□□□ -1.86
SMCHD1-205ENST00000581383 P2RY4P51582 365 aa3.42□□□□□ -1.86
SMCHD1-205ENST00000581383 BCL2L1Q07817 233 aa3.42□□□□□ -1.86
SMCHD1-205ENST00000581383 RAB40BQ12829 278 aa3.42□□□□□ -1.86
SMCHD1-205ENST00000581383 CUL1Q13616 776 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms