RNA–Protein interactions for RNA: ENST00000581241.5

CSNK1D-217, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 6,094 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-217ENST00000581241 TDGQ13569 410 aa13.69□□□□□ -0.22
CSNK1D-217ENST00000581241 C6orf132Q5T0Z8 1188 aa13.69□□□□□ -0.22
CSNK1D-217ENST00000581241 LYPD4Q6UWN0 246 aa13.69□□□□□ -0.22
CSNK1D-217ENST00000581241 FAM83HQ6ZRV2 1179 aaPredicted RBP13.69□□□□□ -0.22
CSNK1D-217ENST00000581241 CDRT4Q8N9R6 151 aa13.69□□□□□ -0.22
CSNK1D-217ENST00000581241 NALCNQ8IZF0 1738 aa13.69□□□□□ -0.22
CSNK1D-217ENST00000581241 DCDC2BA2VCK2 349 aa13.69□□□□□ -0.22
CSNK1D-217ENST00000581241 HHLA1C9JL84 531 aa13.69□□□□□ -0.22
CSNK1D-217ENST00000581241 SHOXO15266 292 aa13.69□□□□□ -0.22
CSNK1D-217ENST00000581241 RAB31Q13636 194 aa13.69□□□□□ -0.22
CSNK1D-217ENST00000581241 ZFAND1Q8TCF1 268 aa13.69□□□□□ -0.22
CSNK1D-217ENST00000581241 TESQ9UGI8 421 aaKnown RBP13.69□□□□□ -0.22
CSNK1D-217ENST00000581241 A0A0U1RQK1 487 aa13.69□□□□□ -0.22
CSNK1D-217ENST00000581241 A0A1W2PQU0 124 aa13.69□□□□□ -0.22
CSNK1D-217ENST00000581241 GABRR3A8MPY1 467 aa13.69□□□□□ -0.22
CSNK1D-217ENST00000581241 TXNL1O43396 289 aa13.69□□□□□ -0.22
CSNK1D-217ENST00000581241 FUT1P19526 365 aa13.69□□□□□ -0.22
CSNK1D-217ENST00000581241 PODNL1Q6PEZ8 512 aa13.69□□□□□ -0.22
CSNK1D-217ENST00000581241 APOOLQ6UXV4 268 aa13.69□□□□□ -0.22
CSNK1D-217ENST00000581241 FCRL1Q96LA6 429 aa13.69□□□□□ -0.22
CSNK1D-217ENST00000581241 TEPSINQ96N21 525 aa13.69□□□□□ -0.22
CSNK1D-217ENST00000581241 COPS3Q9UNS2 423 aa13.69□□□□□ -0.22
CSNK1D-217ENST00000581241 OR6C65A6NJZ3 312 aa13.68□□□□□ -0.22
CSNK1D-217ENST00000581241 CACNG3O60359 315 aa13.68□□□□□ -0.22
CSNK1D-217ENST00000581241 RAP2BP61225 183 aa13.68□□□□□ -0.22
CSNK1D-217ENST00000581241 LTBQ06643 244 aa13.68□□□□□ -0.22
CSNK1D-217ENST00000581241 BTN1A1Q13410 526 aa13.68□□□□□ -0.22
CSNK1D-217ENST00000581241 DCST2Q5T1A1 773 aa13.68□□□□□ -0.22
CSNK1D-217ENST00000581241 SBSNQ6UWP8 590 aa13.68□□□□□ -0.22
CSNK1D-217ENST00000581241 CYB561A3Q8NBI2 242 aa13.68□□□□□ -0.22
CSNK1D-217ENST00000581241 MDGA1Q8NFP4 955 aa13.68□□□□□ -0.22
CSNK1D-217ENST00000581241 TSACCQ96A04 125 aaPredicted RBP13.68□□□□□ -0.22
CSNK1D-217ENST00000581241 INTS14Q96SY0 518 aa13.68□□□□□ -0.22
CSNK1D-217ENST00000581241 SLC19A3Q9BZV2 496 aa13.68□□□□□ -0.22
CSNK1D-217ENST00000581241 PITHD1Q9GZP4 211 aaPredicted RBP13.68□□□□□ -0.22
CSNK1D-217ENST00000581241 TREX1Q9NSU2 369 aa13.68□□□□□ -0.22
CSNK1D-217ENST00000581241 ZNF223Q9UK11 482 aaPredicted RBP13.68□□□□□ -0.22
CSNK1D-217ENST00000581241 MYH2Q9UKX2 1941 aa13.68□□□□□ -0.22
CSNK1D-217ENST00000581241 A0A1W2PS29 197 aa13.68□□□□□ -0.22
CSNK1D-217ENST00000581241 MED6O75586 246 aa13.68□□□□□ -0.22
CSNK1D-217ENST00000581241 UBL4AP11441 157 aa13.68□□□□□ -0.22
CSNK1D-217ENST00000581241 IL32P24001 234 aa13.68□□□□□ -0.22
CSNK1D-217ENST00000581241 RAB28P51157 221 aa13.68□□□□□ -0.22
CSNK1D-217ENST00000581241 EEF1A1P5Q5VTE0 462 aa13.68□□□□□ -0.22
CSNK1D-217ENST00000581241 CNTN4Q8IWV2 1026 aa13.68□□□□□ -0.22
CSNK1D-217ENST00000581241 CBARPQ8N350 705 aaPredicted RBP13.68□□□□□ -0.22
CSNK1D-217ENST00000581241 ABHD5Q8WTS1 349 aa13.68□□□□□ -0.22
CSNK1D-217ENST00000581241 SMAP2Q8WU79 429 aaPredicted RBP13.68□□□□□ -0.22
CSNK1D-217ENST00000581241 TM9SF4Q92544 642 aa13.68□□□□□ -0.22
CSNK1D-217ENST00000581241 ZNF160Q9HCG1 818 aa13.68□□□□□ -0.22
CSNK1D-217ENST00000581241 TXNL4BQ9NX01 149 aaKnown RBP13.68□□□□□ -0.22
CSNK1D-217ENST00000581241 ZNF705GA8MUZ8 300 aaPredicted RBP13.68□□□□□ -0.22
CSNK1D-217ENST00000581241 ANKRD28O15084 1053 aa13.68□□□□□ -0.22
CSNK1D-217ENST00000581241 LILRB5O75023 590 aa13.68□□□□□ -0.22
CSNK1D-217ENST00000581241 RAB40ALP0C0E4 278 aa13.68□□□□□ -0.22
CSNK1D-217ENST00000581241 SLC5A2P31639 672 aa13.68□□□□□ -0.22
CSNK1D-217ENST00000581241 ERVK-16P61578 105 aa13.68□□□□□ -0.22
CSNK1D-217ENST00000581241 CAMK2DQ13557 499 aa13.68□□□□□ -0.22
CSNK1D-217ENST00000581241 PGGHGQ32M88 737 aa13.68□□□□□ -0.22
CSNK1D-217ENST00000581241 RAB40AQ8WXH6 277 aa13.68□□□□□ -0.22
CSNK1D-217ENST00000581241 C3orf30Q96M34 536 aa13.68□□□□□ -0.22
CSNK1D-217ENST00000581241 STRADBQ9C0K7 418 aa13.68□□□□□ -0.22
CSNK1D-217ENST00000581241 NAA50Q9GZZ1 169 aaKnown RBP13.68□□□□□ -0.22
CSNK1D-217ENST00000581241 QPCTLQ9NXS2 382 aa13.68□□□□□ -0.22
CSNK1D-217ENST00000581241 UNCXA6NJT0 531 aa13.68□□□□□ -0.22
CSNK1D-217ENST00000581241 ALPLP05186 524 aa13.68□□□□□ -0.22
CSNK1D-217ENST00000581241 FBXO45P0C2W1 286 aa13.68□□□□□ -0.22
CSNK1D-217ENST00000581241 BMP4P12644 408 aa13.68□□□□□ -0.22
CSNK1D-217ENST00000581241 ACPPP15309 386 aa13.68□□□□□ -0.22
CSNK1D-217ENST00000581241 AFF3P51826 1226 aaKnown RBP13.68□□□□□ -0.22
CSNK1D-217ENST00000581241 SSTP61278 116 aa13.68□□□□□ -0.22
CSNK1D-217ENST00000581241 ECH1Q13011 328 aa13.68□□□□□ -0.22
CSNK1D-217ENST00000581241 MELKQ14680 651 aa13.68□□□□□ -0.22
CSNK1D-217ENST00000581241 PGAP1Q75T13 922 aa13.68□□□□□ -0.22
CSNK1D-217ENST00000581241 CDS1Q92903 461 aa13.68□□□□□ -0.22
CSNK1D-217ENST00000581241 PGAP2Q9UHJ9 254 aa13.68□□□□□ -0.22
CSNK1D-217ENST00000581241 MYH7P12883 1935 aa13.68□□□□□ -0.22
CSNK1D-217ENST00000581241 NUPL2O15504 423 aaKnown RBP13.68□□□□□ -0.22
CSNK1D-217ENST00000581241 RAD1O60671 282 aa13.68□□□□□ -0.22
CSNK1D-217ENST00000581241 GABRA5P31644 462 aa13.68□□□□□ -0.22
CSNK1D-217ENST00000581241 KCNIP4Q6PIL6 250 aa13.68□□□□□ -0.22
CSNK1D-217ENST00000581241 C3orf49Q96BT1 292 aa13.68□□□□□ -0.22
CSNK1D-217ENST00000581241 FAM71F1Q96KD3 344 aaPredicted RBP13.68□□□□□ -0.22
CSNK1D-217ENST00000581241 SLC38A1Q9H2H9 487 aa13.68□□□□□ -0.22
CSNK1D-217ENST00000581241 HRH4Q9H3N8 390 aa13.68□□□□□ -0.22
CSNK1D-217ENST00000581241 GFOD1Q9NXC2 390 aa13.68□□□□□ -0.22
CSNK1D-217ENST00000581241 CD300LBA8K4G0 201 aa13.67□□□□□ -0.22
CSNK1D-217ENST00000581241 MMP2P08253 660 aa13.67□□□□□ -0.22
CSNK1D-217ENST00000581241 SORDQ00796 357 aa13.67□□□□□ -0.22
CSNK1D-217ENST00000581241 ELAVL3Q14576 367 aaKnown RBP13.67□□□□□ -0.22
CSNK1D-217ENST00000581241 HMGN3Q15651 99 aa13.67□□□□□ -0.22
CSNK1D-217ENST00000581241 MEX3DQ86XN8 651 aaKnown RBP13.67□□□□□ -0.22
CSNK1D-217ENST00000581241 OR7G3Q8NG95 312 aa13.67□□□□□ -0.22
CSNK1D-217ENST00000581241 OR4M1Q8NGD0 313 aa13.67□□□□□ -0.22
CSNK1D-217ENST00000581241 FIBINQ8TAL6 211 aa13.67□□□□□ -0.22
CSNK1D-217ENST00000581241 SLC2A12Q8TD20 617 aa13.67□□□□□ -0.22
CSNK1D-217ENST00000581241 NANOS1Q8WY41 292 aaKnown RBP13.67□□□□□ -0.22
CSNK1D-217ENST00000581241 SORCS2Q96PQ0 1159 aa13.67□□□□□ -0.22
CSNK1D-217ENST00000581241 PAPOLGQ9BWT3 736 aaKnown RBP13.67□□□□□ -0.22
CSNK1D-217ENST00000581241 BABAM2Q9NXR7 383 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms