RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 CPVLQ9H3G5 476 aa2.76□□□□□ -1.97
KPNB1-208ENST00000580019 LRRN3Q9H3W5 708 aa2.76□□□□□ -1.97
KPNB1-208ENST00000580019 RHOJQ9H4E5 214 aa2.76□□□□□ -1.97
KPNB1-208ENST00000580019 FBXO44Q9H4M3 255 aa2.76□□□□□ -1.97
KPNB1-208ENST00000580019 DCTPP1Q9H773 170 aa2.76□□□□□ -1.97
KPNB1-208ENST00000580019 ANKRA2Q9H9E1 313 aa2.76□□□□□ -1.97
KPNB1-208ENST00000580019 MRPS30Q9NP92 439 aaKnown RBP2.76□□□□□ -1.97
KPNB1-208ENST00000580019 A4GALTQ9NPC4 353 aa2.76□□□□□ -1.97
KPNB1-208ENST00000580019 IL26Q9NPH9 171 aa2.76□□□□□ -1.97
KPNB1-208ENST00000580019 KRCC1Q9NPI7 259 aaPredicted RBP2.76□□□□□ -1.97
KPNB1-208ENST00000580019 PNO1Q9NRX1 252 aaKnown RBP2.76□□□□□ -1.97
KPNB1-208ENST00000580019 GPR83Q9NYM4 423 aa2.76□□□□□ -1.97
KPNB1-208ENST00000580019 PSMC3IPQ9P2W1 217 aaPredicted RBP2.76□□□□□ -1.97
KPNB1-208ENST00000580019 STX18Q9P2W9 335 aaKnown RBP2.76□□□□□ -1.97
KPNB1-208ENST00000580019 POLKQ9UBT6 870 aa2.76□□□□□ -1.97
KPNB1-208ENST00000580019 C19orf25Q9UFG5 118 aaPredicted RBP2.76□□□□□ -1.97
KPNB1-208ENST00000580019 PILRBQ9UKJ0 227 aa2.76□□□□□ -1.97
KPNB1-208ENST00000580019 PRDM4Q9UKN5 801 aa2.76□□□□□ -1.97
KPNB1-208ENST00000580019 EIF3LQ9Y262 564 aaKnown RBP2.76□□□□□ -1.97
KPNB1-208ENST00000580019 SLC6A5Q9Y345 797 aa2.76□□□□□ -1.97
KPNB1-208ENST00000580019 WIPI2Q9Y4P8 454 aa2.76□□□□□ -1.97
KPNB1-208ENST00000580019 CSDC2Q9Y534 153 aaKnown RBP2.76□□□□□ -1.97
KPNB1-208ENST00000580019 COL5A2P05997 1499 aaPredicted RBP2.76□□□□□ -1.97
KPNB1-208ENST00000580019 LTBP1Q14766 1721 aa2.76□□□□□ -1.97
KPNB1-208ENST00000580019 PIK3C2AO00443 1686 aa2.76□□□□□ -1.97
KPNB1-208ENST00000580019 NHSQ6T4R5 1651 aa2.76□□□□□ -1.97
KPNB1-208ENST00000580019 TRPM1Q7Z4N2 1603 aa2.75□□□□□ -1.97
KPNB1-208ENST00000580019 RPAP1Q9BWH6 1393 aaPredicted RBP2.75□□□□□ -1.97
KPNB1-208ENST00000580019 PLEKHH1Q9ULM0 1364 aa2.75□□□□□ -1.97
KPNB1-208ENST00000580019 BTAF1O14981 1849 aa2.75□□□□□ -1.97
KPNB1-208ENST00000580019 PDS5AQ29RF7 1337 aaKnown RBP2.75□□□□□ -1.97
KPNB1-208ENST00000580019 SH3TC1Q8TE82 1336 aa2.75□□□□□ -1.97
KPNB1-208ENST00000580019 MYO3BQ8WXR4 1341 aa2.75□□□□□ -1.97
KPNB1-208ENST00000580019 RGPD8O14715 1765 aaPredicted RBP2.75□□□□□ -1.97
KPNB1-208ENST00000580019 TRBV5-5A0A0J9YX44 114 aa2.75□□□□□ -1.97
KPNB1-208ENST00000580019 A0A1B0GUH1 482 aa2.75□□□□□ -1.97
KPNB1-208ENST00000580019 SH3PXD2BA1X283 911 aa2.75□□□□□ -1.97
KPNB1-208ENST00000580019 ZNF840PA6NDX5 716 aa2.75□□□□□ -1.97
KPNB1-208ENST00000580019 ERI2A8K979 691 aaKnown RBP2.75□□□□□ -1.97
KPNB1-208ENST00000580019 PDZK1P1A8MUH7 402 aa2.75□□□□□ -1.97
KPNB1-208ENST00000580019 TCP10L2B9ZVM9 353 aa2.75□□□□□ -1.97
KPNB1-208ENST00000580019 PDLIM1O00151 329 aa2.75□□□□□ -1.97
KPNB1-208ENST00000580019 HAS3O00219 553 aa2.75□□□□□ -1.97
KPNB1-208ENST00000580019 WWP2O00308 870 aa2.75□□□□□ -1.97
KPNB1-208ENST00000580019 OR7A17O14581 309 aa2.75□□□□□ -1.97
KPNB1-208ENST00000580019 RS1O15537 224 aa2.75□□□□□ -1.97
KPNB1-208ENST00000580019 P2RX6O15547 441 aa2.75□□□□□ -1.97
KPNB1-208ENST00000580019 RRP8O43159 456 aaKnown RBP2.75□□□□□ -1.97
KPNB1-208ENST00000580019 MLNRO43193 412 aa2.75□□□□□ -1.97
KPNB1-208ENST00000580019 KIAA0513O60268 411 aa2.75□□□□□ -1.97
KPNB1-208ENST00000580019 OR2F2O95006 317 aa2.75□□□□□ -1.97
KPNB1-208ENST00000580019 NXPH2O95156 264 aa2.75□□□□□ -1.97
KPNB1-208ENST00000580019 CLDN9O95484 217 aa2.75□□□□□ -1.97
KPNB1-208ENST00000580019 ATP1B1P05026 303 aa2.75□□□□□ -1.97
KPNB1-208ENST00000580019 SERPIND1P05546 499 aa2.75□□□□□ -1.97
KPNB1-208ENST00000580019 IGHV4-30-4P0DP06 118 aa2.75□□□□□ -1.97
KPNB1-208ENST00000580019 UMPSP11172 480 aa2.75□□□□□ -1.97
KPNB1-208ENST00000580019 ETS2P15036 469 aa2.75□□□□□ -1.97
KPNB1-208ENST00000580019 H2AFXP16104 143 aaPredicted RBP2.75□□□□□ -1.97
KPNB1-208ENST00000580019 ACADSP16219 412 aa2.75□□□□□ -1.97
KPNB1-208ENST00000580019 ZNF24P17028 368 aa2.75□□□□□ -1.97
KPNB1-208ENST00000580019 TBXA2RP21731 343 aa2.75□□□□□ -1.97
KPNB1-208ENST00000580019 CA6P23280 308 aa2.75□□□□□ -1.97
KPNB1-208ENST00000580019 C21orf33P30042 268 aaPredicted RBP2.75□□□□□ -1.97
KPNB1-208ENST00000580019 RORAP35398 523 aa2.75□□□□□ -1.97
KPNB1-208ENST00000580019 AMTP48728 403 aa2.75□□□□□ -1.97
KPNB1-208ENST00000580019 CASP4P49662 377 aa2.75□□□□□ -1.97
KPNB1-208ENST00000580019 CCNG1P51959 295 aa2.75□□□□□ -1.97
KPNB1-208ENST00000580019 HERV-K104P61576 105 aa2.75□□□□□ -1.97
KPNB1-208ENST00000580019 POU3F1Q03052 451 aaPredicted RBP2.75□□□□□ -1.97
KPNB1-208ENST00000580019 ZP4Q12836 540 aa2.75□□□□□ -1.97
KPNB1-208ENST00000580019 SLAQ13239 276 aa2.75□□□□□ -1.97
KPNB1-208ENST00000580019 PEX6Q13608 980 aa2.75□□□□□ -1.97
KPNB1-208ENST00000580019 KLF5Q13887 457 aaPredicted RBP2.75□□□□□ -1.97
KPNB1-208ENST00000580019 RBM39Q14498 530 aaKnown RBP2.75□□□□□ -1.97
KPNB1-208ENST00000580019 C3AR1Q16581 482 aa2.75□□□□□ -1.97
KPNB1-208ENST00000580019 ZNF699Q32M78 642 aa2.75□□□□□ -1.97
KPNB1-208ENST00000580019 PDZK1Q5T2W1 519 aa2.75□□□□□ -1.97
KPNB1-208ENST00000580019 LCN1P1Q5VSP4 162 aa2.75□□□□□ -1.97
KPNB1-208ENST00000580019 TWF2Q6IBS0 349 aaKnown RBP2.75□□□□□ -1.97
KPNB1-208ENST00000580019 LEG1Q6P5S2 330 aa2.75□□□□□ -1.97
KPNB1-208ENST00000580019 BHLHB9Q6PI77 547 aa2.75□□□□□ -1.97
KPNB1-208ENST00000580019 ASB18Q6ZVZ8 466 aa2.75□□□□□ -1.97
KPNB1-208ENST00000580019 SMIM5Q71RC9 77 aa2.75□□□□□ -1.97
KPNB1-208ENST00000580019 SLC24A5Q71RS6 500 aa2.75□□□□□ -1.97
KPNB1-208ENST00000580019 C5orf24Q7Z6I8 188 aa2.75□□□□□ -1.97
KPNB1-208ENST00000580019 ANKRD37Q7Z713 158 aa2.75□□□□□ -1.97
KPNB1-208ENST00000580019 CTU1Q7Z7A3 348 aaKnown RBP2.75□□□□□ -1.97
KPNB1-208ENST00000580019 TMEM17Q86X19 198 aa2.75□□□□□ -1.97
KPNB1-208ENST00000580019 CACUL1Q86Y37 369 aa2.75□□□□□ -1.97
KPNB1-208ENST00000580019 LRRC49Q8IUZ0 686 aa2.75□□□□□ -1.97
KPNB1-208ENST00000580019 TBC1D10CQ8IV04 446 aa2.75□□□□□ -1.97
KPNB1-208ENST00000580019 MFSD6LQ8IWD5 586 aa2.75□□□□□ -1.97
KPNB1-208ENST00000580019 GPC2Q8N158 579 aa2.75□□□□□ -1.97
KPNB1-208ENST00000580019 TEX26Q8N6G2 289 aa2.75□□□□□ -1.97
KPNB1-208ENST00000580019 PQLC3Q8N755 202 aa2.75□□□□□ -1.97
KPNB1-208ENST00000580019 KCNH5Q8NCM2 988 aa2.75□□□□□ -1.97
KPNB1-208ENST00000580019 ADAD2Q8NCV1 583 aaKnown RBP2.75□□□□□ -1.97
KPNB1-208ENST00000580019 C7orf57Q8NEG2 295 aa2.75□□□□□ -1.97
KPNB1-208ENST00000580019 OR5T3Q8NGG3 340 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms