RNA–Protein interactions for RNA: ENST00000579061.5

SS18-212, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-212ENST00000579061 ZIM2Q9NZV7 527 aa13.38□□□□□ -0.27
SS18-212ENST00000579061 NPIPA5A0A0B4J1W7 369 aa13.37□□□□□ -0.27
SS18-212ENST00000579061 SLC22A20A6NK97 555 aa13.37□□□□□ -0.27
SS18-212ENST00000579061 NPIPA7E9PJI5 369 aa13.37□□□□□ -0.27
SS18-212ENST00000579061 GMFGO60234 142 aa13.37□□□□□ -0.27
SS18-212ENST00000579061 EIF4E2O60573 245 aaKnown RBP13.37□□□□□ -0.27
SS18-212ENST00000579061 TGM6O95932 706 aa13.37□□□□□ -0.27
SS18-212ENST00000579061 IL6P05231 212 aa13.37□□□□□ -0.27
SS18-212ENST00000579061 LINGO3P0C6S8 592 aa13.37□□□□□ -0.27
SS18-212ENST00000579061 NPIPA8P0DM63 369 aa13.37□□□□□ -0.27
SS18-212ENST00000579061 PSMA4P25789 261 aaKnown RBP13.37□□□□□ -0.27
SS18-212ENST00000579061 ADH6P28332 368 aa13.37□□□□□ -0.27
SS18-212ENST00000579061 UQCRC1P31930 480 aa13.37□□□□□ -0.27
SS18-212ENST00000579061 NME5P56597 212 aa13.37□□□□□ -0.27
SS18-212ENST00000579061 CLDN20P56880 219 aa13.37□□□□□ -0.27
SS18-212ENST00000579061 RAC1P63000 192 aa13.37□□□□□ -0.27
SS18-212ENST00000579061 ZNF117Q03924 483 aa13.37□□□□□ -0.27
SS18-212ENST00000579061 FOXF2Q12947 444 aa13.37□□□□□ -0.27
SS18-212ENST00000579061 ZNF141Q15928 474 aa13.37□□□□□ -0.27
SS18-212ENST00000579061 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.37□□□□□ -0.27
SS18-212ENST00000579061 ATAD3BQ5T9A4 648 aa13.37□□□□□ -0.27
SS18-212ENST00000579061 MSANTD1Q6ZTZ1 278 aa13.37□□□□□ -0.27
SS18-212ENST00000579061 C16orf62Q7Z3J2 963 aa13.37□□□□□ -0.27
SS18-212ENST00000579061 P4HA3Q7Z4N8 544 aa13.37□□□□□ -0.27
SS18-212ENST00000579061 KIF18BQ86Y91 864 aa13.37□□□□□ -0.27
SS18-212ENST00000579061 CLEC4FQ8N1N0 589 aa13.37□□□□□ -0.27
SS18-212ENST00000579061 GOLGA6L1Q8N7Z2 621 aa13.37□□□□□ -0.27
SS18-212ENST00000579061 TOR1AIP2Q8NFQ8 470 aa13.37□□□□□ -0.27
SS18-212ENST00000579061 LRRC8CQ8TDW0 803 aa13.37□□□□□ -0.27
SS18-212ENST00000579061 INTS12Q96CB8 462 aaKnown RBP13.37□□□□□ -0.27
SS18-212ENST00000579061 SH3YL1Q96HL8 342 aaPredicted RBP13.37□□□□□ -0.27
SS18-212ENST00000579061 ZNF559Q9BR84 538 aa13.37□□□□□ -0.27
SS18-212ENST00000579061 ZNF350Q9GZX5 532 aa13.37□□□□□ -0.27
SS18-212ENST00000579061 SAP130Q9H0E3 1048 aa13.37□□□□□ -0.27
SS18-212ENST00000579061 SDR39U1Q9NRG7 319 aaPredicted RBP13.37□□□□□ -0.27
SS18-212ENST00000579061 PAQR5Q9NXK6 330 aaPredicted RBP13.37□□□□□ -0.27
SS18-212ENST00000579061 ICAM5Q9UMF0 924 aa13.37□□□□□ -0.27
SS18-212ENST00000579061 USH1CQ9Y6N9 552 aa13.37□□□□□ -0.27
SS18-212ENST00000579061 PDZD2O15018 2839 aa13.37□□□□□ -0.27
SS18-212ENST00000579061 MYO9AB2RTY4 2548 aa13.37□□□□□ -0.27
SS18-212ENST00000579061 CCDC154A6NI56 674 aa13.36□□□□□ -0.27
SS18-212ENST00000579061 GTPBP1O00178 669 aaKnown RBP13.36□□□□□ -0.27
SS18-212ENST00000579061 UBDO15205 165 aa13.36□□□□□ -0.27
SS18-212ENST00000579061 SEC14L5O43304 696 aa13.36□□□□□ -0.27
SS18-212ENST00000579061 SLC22A3O75751 556 aa13.36□□□□□ -0.27
SS18-212ENST00000579061 OR12D1P0DN82 309 aa13.36□□□□□ -0.27
SS18-212ENST00000579061 ELK4P28324 431 aa13.36□□□□□ -0.27
SS18-212ENST00000579061 CHI3L1P36222 383 aaPredicted RBP13.36□□□□□ -0.27
SS18-212ENST00000579061 KHKP50053 298 aa13.36□□□□□ -0.27
SS18-212ENST00000579061 ANXA11P50995 505 aaKnown RBP13.36□□□□□ -0.27
SS18-212ENST00000579061 SORDQ00796 357 aa13.36□□□□□ -0.27
SS18-212ENST00000579061 EPGNQ6UW88 154 aa13.36□□□□□ -0.27
SS18-212ENST00000579061 GGNQ86UU5 652 aa13.36□□□□□ -0.27
SS18-212ENST00000579061 POC1BQ8TC44 478 aa13.36□□□□□ -0.27
SS18-212ENST00000579061 XAGE5Q8WWM1 108 aa13.36□□□□□ -0.27
SS18-212ENST00000579061 ARSGQ96EG1 525 aa13.36□□□□□ -0.27
SS18-212ENST00000579061 RNF145Q96MT1 663 aa13.36□□□□□ -0.27
SS18-212ENST00000579061 OR52B2Q96RD2 323 aa13.36□□□□□ -0.27
SS18-212ENST00000579061 PANX1Q96RD7 426 aa13.36□□□□□ -0.27
SS18-212ENST00000579061 PINK1Q9BXM7 581 aa13.36□□□□□ -0.27
SS18-212ENST00000579061 CARD8Q9Y2G2 431 aa13.36□□□□□ -0.27
SS18-212ENST00000579061 GPC6Q9Y625 555 aaPredicted RBP13.36□□□□□ -0.27
SS18-212ENST00000579061 A0A1W2PNV4 684 aa13.35□□□□□ -0.27
SS18-212ENST00000579061 SERINC4A6NH21 518 aa13.35□□□□□ -0.27
SS18-212ENST00000579061 SHISA8B8ZZ34 492 aa13.35□□□□□ -0.27
SS18-212ENST00000579061 EEF1E1-BLOC1S5C9J1V9 151 aa13.35□□□□□ -0.27
SS18-212ENST00000579061 H0YC42 278 aa13.35□□□□□ -0.27
SS18-212ENST00000579061 ADAMDEC1O15204 470 aa13.35□□□□□ -0.27
SS18-212ENST00000579061 ZNF264O43296 627 aa13.35□□□□□ -0.27
SS18-212ENST00000579061 EEF1E1O43324 174 aaKnown RBP13.35□□□□□ -0.27
SS18-212ENST00000579061 DIAPH2O60879 1101 aa13.35□□□□□ -0.27
SS18-212ENST00000579061 UBL4AP11441 157 aa13.35□□□□□ -0.27
SS18-212ENST00000579061 FCGR2AP12318 317 aa13.35□□□□□ -0.27
SS18-212ENST00000579061 ME2P23368 584 aa13.35□□□□□ -0.27
SS18-212ENST00000579061 MAGEA8P43361 318 aa13.35□□□□□ -0.27
SS18-212ENST00000579061 KIR2DL3P43628 341 aa13.35□□□□□ -0.27
SS18-212ENST00000579061 MRPL19P49406 292 aaKnown RBP13.35□□□□□ -0.27
SS18-212ENST00000579061 PCYT1AP49585 367 aa13.35□□□□□ -0.27
SS18-212ENST00000579061 AGFG1P52594 562 aaKnown RBP13.35□□□□□ -0.27
SS18-212ENST00000579061 TPD52P55327 224 aaPredicted RBP13.35□□□□□ -0.27
SS18-212ENST00000579061 MYBPHQ13203 477 aa13.35□□□□□ -0.27
SS18-212ENST00000579061 FGFBP1Q14512 234 aa13.35□□□□□ -0.27
SS18-212ENST00000579061 GPR68Q15743 365 aa13.35□□□□□ -0.27
SS18-212ENST00000579061 PDSS1Q5T2R2 415 aa13.35□□□□□ -0.27
SS18-212ENST00000579061 PDZK1Q5T2W1 519 aa13.35□□□□□ -0.27
SS18-212ENST00000579061 TNFAIP8L2Q6P589 184 aaPredicted RBP13.35□□□□□ -0.27
SS18-212ENST00000579061 CBLN3Q6UW01 205 aa13.35□□□□□ -0.27
SS18-212ENST00000579061 PLXDC2Q6UX71 529 aa13.35□□□□□ -0.27
SS18-212ENST00000579061 ZNF621Q6ZSS3 439 aa13.35□□□□□ -0.27
SS18-212ENST00000579061 ESPNLQ6ZVH7 1005 aa13.35□□□□□ -0.27
SS18-212ENST00000579061 GCNT2Q8N0V5 402 aa13.35□□□□□ -0.27
SS18-212ENST00000579061 ZNF614Q8N883 585 aa13.35□□□□□ -0.27
SS18-212ENST00000579061 GPR119Q8TDV5 335 aa13.35□□□□□ -0.27
SS18-212ENST00000579061 FAM222BQ8WU58 562 aa13.35□□□□□ -0.27
SS18-212ENST00000579061 SMPDL3BQ92485 455 aa13.35□□□□□ -0.27
SS18-212ENST00000579061 FIG4Q92562 907 aa13.35□□□□□ -0.27
SS18-212ENST00000579061 ROPN1LQ96C74 230 aa13.35□□□□□ -0.27
SS18-212ENST00000579061 ADGRG7Q96K78 797 aa13.35□□□□□ -0.27
SS18-212ENST00000579061 LAT2Q9GZY6 243 aa13.35□□□□□ -0.27
SS18-212ENST00000579061 RNF122Q9H9V4 155 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms