RNA–Protein interactions for RNA: ENST00000578904.1

CSNK1D-209, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-209ENST00000578904 MLF1P58340 268 aa12.78□□□□□ -0.36
CSNK1D-209ENST00000578904 TAS2R41P59536 307 aa12.78□□□□□ -0.36
CSNK1D-209ENST00000578904 COPZ1P61923 177 aa12.78□□□□□ -0.36
CSNK1D-209ENST00000578904 SPIBQ01892 262 aa12.78□□□□□ -0.36
CSNK1D-209ENST00000578904 COLEC12Q5KU26 742 aa12.78□□□□□ -0.36
CSNK1D-209ENST00000578904 AGAP7PQ5VUJ5 663 aa12.78□□□□□ -0.36
CSNK1D-209ENST00000578904 B3GNTL1Q67FW5 361 aaPredicted RBP12.78□□□□□ -0.36
CSNK1D-209ENST00000578904 H3F3CQ6NXT2 135 aa12.78□□□□□ -0.36
CSNK1D-209ENST00000578904 ZBTB49Q6ZSB9 765 aa12.78□□□□□ -0.36
CSNK1D-209ENST00000578904 OLIG3Q7RTU3 272 aa12.78□□□□□ -0.36
CSNK1D-209ENST00000578904 LILRA2Q8N149 483 aa12.78□□□□□ -0.36
CSNK1D-209ENST00000578904 LINC00471Q8N535 108 aa12.78□□□□□ -0.36
CSNK1D-209ENST00000578904 PACRGLQ8N7B6 248 aa12.78□□□□□ -0.36
CSNK1D-209ENST00000578904 TOR1AIP2Q8NFQ8 470 aa12.78□□□□□ -0.36
CSNK1D-209ENST00000578904 PHOSPHO1Q8TCT1 267 aa12.78□□□□□ -0.36
CSNK1D-209ENST00000578904 PHF10Q8WUB8 498 aaKnown RBP12.78□□□□□ -0.36
CSNK1D-209ENST00000578904 SPACA9Q96E40 222 aaPredicted RBP12.78□□□□□ -0.36
CSNK1D-209ENST00000578904 DTNBP1Q96EV8 351 aa12.78□□□□□ -0.36
CSNK1D-209ENST00000578904 PRRC1Q96M27 445 aa12.78□□□□□ -0.36
CSNK1D-209ENST00000578904 AGAP4Q96P64 663 aa12.78□□□□□ -0.36
CSNK1D-209ENST00000578904 RASL10BQ96S79 203 aa12.78□□□□□ -0.36
CSNK1D-209ENST00000578904 SECISBP2Q96T21 854 aaKnown RBP12.78□□□□□ -0.36
CSNK1D-209ENST00000578904 ZNF559Q9BR84 538 aa12.78□□□□□ -0.36
CSNK1D-209ENST00000578904 CDCP1Q9H5V8 836 aa12.78□□□□□ -0.36
CSNK1D-209ENST00000578904 TMEM27Q9HBJ8 222 aa12.78□□□□□ -0.36
CSNK1D-209ENST00000578904 CNOT11Q9UKZ1 510 aaKnown RBP12.78□□□□□ -0.36
CSNK1D-209ENST00000578904 TMCC3Q9ULS5 477 aa12.78□□□□□ -0.36
CSNK1D-209ENST00000578904 SAMHD1Q9Y3Z3 626 aaKnown RBP12.78□□□□□ -0.36
CSNK1D-209ENST00000578904 HEATR5AQ86XA9 2040 aa12.78□□□□□ -0.36
CSNK1D-209ENST00000578904 TMEM229AB2RXF0 380 aa12.77□□□□□ -0.37
CSNK1D-209ENST00000578904 MKRN2OSH3BPM6 223 aa12.77□□□□□ -0.37
CSNK1D-209ENST00000578904 M0R3H8 397 aa12.77□□□□□ -0.37
CSNK1D-209ENST00000578904 ZNF264O43296 627 aa12.77□□□□□ -0.37
CSNK1D-209ENST00000578904 ICOSLGO75144 302 aa12.77□□□□□ -0.37
CSNK1D-209ENST00000578904 PRSS23O95084 383 aa12.77□□□□□ -0.37
CSNK1D-209ENST00000578904 GADD45GO95257 159 aa12.77□□□□□ -0.37
CSNK1D-209ENST00000578904 H1F0P07305 194 aaKnown RBP12.77□□□□□ -0.37
CSNK1D-209ENST00000578904 THRBP10828 461 aa12.77□□□□□ -0.37
CSNK1D-209ENST00000578904 UBL4AP11441 157 aa12.77□□□□□ -0.37
CSNK1D-209ENST00000578904 FPR1P21462 350 aa12.77□□□□□ -0.37
CSNK1D-209ENST00000578904 RRM2P31350 389 aa12.77□□□□□ -0.37
CSNK1D-209ENST00000578904 EVI2BP34910 448 aa12.77□□□□□ -0.37
CSNK1D-209ENST00000578904 C17orf67Q0P5P2 114 aa12.77□□□□□ -0.37
CSNK1D-209ENST00000578904 ST3GAL3Q11203 375 aa12.77□□□□□ -0.37
CSNK1D-209ENST00000578904 SNTA1Q13424 505 aa12.77□□□□□ -0.37
CSNK1D-209ENST00000578904 MAPK14Q16539 360 aa12.77□□□□□ -0.37
CSNK1D-209ENST00000578904 NTRK2Q16620 822 aa12.77□□□□□ -0.37
CSNK1D-209ENST00000578904 OGFRL1Q5TC84 451 aaPredicted RBP12.77□□□□□ -0.37
CSNK1D-209ENST00000578904 ABHD17BQ5VST6 288 aa12.77□□□□□ -0.37
CSNK1D-209ENST00000578904 PLEKHM3Q6ZWE6 761 aa12.77□□□□□ -0.37
CSNK1D-209ENST00000578904 ZAR1Q86SH2 424 aa12.77□□□□□ -0.37
CSNK1D-209ENST00000578904 CLIP4Q8N3C7 705 aa12.77□□□□□ -0.37
CSNK1D-209ENST00000578904 OR4C3Q8NH37 302 aa12.77□□□□□ -0.37
CSNK1D-209ENST00000578904 PSMF1Q92530 271 aa12.77□□□□□ -0.37
CSNK1D-209ENST00000578904 SGCZQ96LD1 299 aa12.77□□□□□ -0.37
CSNK1D-209ENST00000578904 MCHR1Q99705 422 aa12.77□□□□□ -0.37
CSNK1D-209ENST00000578904 TRIM2Q9C040 744 aa12.77□□□□□ -0.37
CSNK1D-209ENST00000578904 ANKRD19PQ9H560 264 aa12.77□□□□□ -0.37
CSNK1D-209ENST00000578904 LIN28AQ9H9Z2 209 aaKnown RBP12.77□□□□□ -0.37
CSNK1D-209ENST00000578904 KRCC1Q9NPI7 259 aaPredicted RBP12.77□□□□□ -0.37
CSNK1D-209ENST00000578904 EXOSC3Q9NQT5 275 aaKnown RBP12.77□□□□□ -0.37
CSNK1D-209ENST00000578904 HPF1Q9NWY4 346 aa12.77□□□□□ -0.37
CSNK1D-209ENST00000578904 RPS6KB2Q9UBS0 482 aa12.77□□□□□ -0.37
CSNK1D-209ENST00000578904 ORC6Q9Y5N6 252 aa12.77□□□□□ -0.37
CSNK1D-209ENST00000578904 MED13Q9UHV7 2174 aa12.77□□□□□ -0.37
CSNK1D-209ENST00000578904 TMEM200CA6NKL6 621 aa12.76□□□□□ -0.37
CSNK1D-209ENST00000578904 TNFRSF11BO00300 401 aa12.76□□□□□ -0.37
CSNK1D-209ENST00000578904 UGT2B11O75310 529 aa12.76□□□□□ -0.37
CSNK1D-209ENST00000578904 OR5F1O95221 314 aa12.76□□□□□ -0.37
CSNK1D-209ENST00000578904 NADKO95544 446 aaPredicted RBP12.76□□□□□ -0.37
CSNK1D-209ENST00000578904 TNFRSF1BP20333 461 aa12.76□□□□□ -0.37
CSNK1D-209ENST00000578904 IFNGR2P38484 337 aa12.76□□□□□ -0.37
CSNK1D-209ENST00000578904 HSPA13P48723 471 aa12.76□□□□□ -0.37
CSNK1D-209ENST00000578904 ACER2Q5QJU3 275 aa12.76□□□□□ -0.37
CSNK1D-209ENST00000578904 HMBOX1Q6NT76 420 aa12.76□□□□□ -0.37
CSNK1D-209ENST00000578904 SHQ1Q6PI26 577 aaKnown RBP12.76□□□□□ -0.37
CSNK1D-209ENST00000578904 ISLR2Q6UXK2 745 aa12.76□□□□□ -0.37
CSNK1D-209ENST00000578904 LINC00696Q6ZRV3 163 aa12.76□□□□□ -0.37
CSNK1D-209ENST00000578904 RRM2BQ7LG56 351 aa12.76□□□□□ -0.37
CSNK1D-209ENST00000578904 HMGN2P46Q86SG4 172 aa12.76□□□□□ -0.37
CSNK1D-209ENST00000578904 OR6T1Q8NGN1 323 aa12.76□□□□□ -0.37
CSNK1D-209ENST00000578904 LMF1Q96S06 567 aa12.76□□□□□ -0.37
CSNK1D-209ENST00000578904 LAT2Q9GZY6 243 aa12.76□□□□□ -0.37
CSNK1D-209ENST00000578904 ZNF552Q9H707 407 aaPredicted RBP12.76□□□□□ -0.37
CSNK1D-209ENST00000578904 METTL7AQ9H8H3 244 aa12.76□□□□□ -0.37
CSNK1D-209ENST00000578904 KLRF1Q9NZS2 232 aa12.76□□□□□ -0.37
CSNK1D-209ENST00000578904 CNIH4Q9P003 139 aa12.76□□□□□ -0.37
CSNK1D-209ENST00000578904 KCNE5Q9UJ90 142 aa12.76□□□□□ -0.37
CSNK1D-209ENST00000578904 TESMINQ9Y4I5 508 aa12.76□□□□□ -0.37
CSNK1D-209ENST00000578904 PCDHGA9Q9Y5G4 932 aaKnown RBP12.76□□□□□ -0.37
CSNK1D-209ENST00000578904 TRAPPC13A5PLN9 417 aa12.75□□□□□ -0.37
CSNK1D-209ENST00000578904 PRAMEF25A6NGN4 478 aa12.75□□□□□ -0.37
CSNK1D-209ENST00000578904 SAC3D1A6NKF1 404 aa12.75□□□□□ -0.37
CSNK1D-209ENST00000578904 H0YJX3 145 aa12.75□□□□□ -0.37
CSNK1D-209ENST00000578904 LOC400499M0QZD8 3231 aa12.75□□□□□ -0.37
CSNK1D-209ENST00000578904 MAN1A2O60476 641 aa12.75□□□□□ -0.37
CSNK1D-209ENST00000578904 CYP7B1O75881 506 aa12.75□□□□□ -0.37
CSNK1D-209ENST00000578904 LINGO3P0C6S8 592 aa12.75□□□□□ -0.37
CSNK1D-209ENST00000578904 FAM87AP0C7U9 286 aa12.75□□□□□ -0.37
CSNK1D-209ENST00000578904 UBTFL6P0CB48 400 aaPredicted RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms