RNA–Protein interactions for RNA: ENST00000578373.5

ERBB2-206, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 4,523 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-206ENST00000578373 KLHL42Q9P2K6 505 aa11.28□□□□□ -0.6
ERBB2-206ENST00000578373 A0A1W2PPL8 197 aa11.28□□□□□ -0.6
ERBB2-206ENST00000578373 HMX3A6NHT5 357 aa11.28□□□□□ -0.6
ERBB2-206ENST00000578373 MAGEB4O15481 346 aaPredicted RBP11.28□□□□□ -0.6
ERBB2-206ENST00000578373 ADAM23O75077 832 aa11.28□□□□□ -0.6
ERBB2-206ENST00000578373 VNN2O95498 520 aa11.28□□□□□ -0.6
ERBB2-206ENST00000578373 SDHBP21912 280 aa11.28□□□□□ -0.6
ERBB2-206ENST00000578373 CCNOP22674 350 aa11.28□□□□□ -0.6
ERBB2-206ENST00000578373 ATP5A1P25705 553 aaKnown RBP11.28□□□□□ -0.6
ERBB2-206ENST00000578373 KCNJ10P78508 379 aa11.28□□□□□ -0.6
ERBB2-206ENST00000578373 CTBSQ01459 385 aa11.28□□□□□ -0.6
ERBB2-206ENST00000578373 ZNF33BQ06732 778 aa11.28□□□□□ -0.6
ERBB2-206ENST00000578373 ARHGAP11AQ6P4F7 1023 aa11.28□□□□□ -0.6
ERBB2-206ENST00000578373 PTOV1Q86YD1 416 aa11.28□□□□□ -0.6
ERBB2-206ENST00000578373 MRPL43Q8N983 215 aaKnown RBP11.28□□□□□ -0.6
ERBB2-206ENST00000578373 OR5T3Q8NGG3 340 aa11.28□□□□□ -0.6
ERBB2-206ENST00000578373 ZDHHC1Q8WTX9 485 aa11.28□□□□□ -0.6
ERBB2-206ENST00000578373 TM4SF18Q96CE8 201 aa11.28□□□□□ -0.6
ERBB2-206ENST00000578373 ZFYVE21Q9BQ24 234 aa11.28□□□□□ -0.6
ERBB2-206ENST00000578373 ALOXE3Q9BYJ1 711 aa11.28□□□□□ -0.6
ERBB2-206ENST00000578373 RBM38Q9H0Z9 239 aaKnown RBP11.28□□□□□ -0.6
ERBB2-206ENST00000578373 OR51J1Q9H342 316 aa11.28□□□□□ -0.6
ERBB2-206ENST00000578373 OSGIN1Q9UJX0 560 aa11.28□□□□□ -0.6
ERBB2-206ENST00000578373 H7C1C5 153 aa11.27□□□□□ -0.6
ERBB2-206ENST00000578373 F13BP05160 661 aa11.27□□□□□ -0.6
ERBB2-206ENST00000578373 ACP2P11117 423 aa11.27□□□□□ -0.6
ERBB2-206ENST00000578373 PTPN6P29350 595 aa11.27□□□□□ -0.6
ERBB2-206ENST00000578373 LCN6P62502 163 aa11.27□□□□□ -0.6
ERBB2-206ENST00000578373 MRPL2Q5T653 305 aaKnown RBP11.27□□□□□ -0.6
ERBB2-206ENST00000578373 TMEM255BQ8WV15 326 aa11.27□□□□□ -0.6
ERBB2-206ENST00000578373 EID2BQ96D98 161 aa11.27□□□□□ -0.6
ERBB2-206ENST00000578373 ZNF582Q96NG8 517 aaPredicted RBP11.27□□□□□ -0.6
ERBB2-206ENST00000578373 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.27□□□□□ -0.62e-6■■□□□ 12.9
ERBB2-206ENST00000578373 PELI2Q9HAT8 420 aa11.27□□□□□ -0.6
ERBB2-206ENST00000578373 EPHA6Q9UF33 1036 aa11.27□□□□□ -0.6
ERBB2-206ENST00000578373 SCP2D1Q9UJQ7 156 aa11.27□□□□□ -0.6
ERBB2-206ENST00000578373 PADI2Q9Y2J8 665 aa11.27□□□□□ -0.6
ERBB2-206ENST00000578373 KLK4Q9Y5K2 254 aa11.27□□□□□ -0.6
ERBB2-206ENST00000578373 ALG5Q9Y673 324 aa11.27□□□□□ -0.6
ERBB2-206ENST00000578373 TEX13DA0A0J9YY54 714 aaPredicted RBP11.27□□□□□ -0.61
ERBB2-206ENST00000578373 CLEC3AO75596 197 aa11.27□□□□□ -0.61
ERBB2-206ENST00000578373 TFP02787 698 aa11.27□□□□□ -0.61
ERBB2-206ENST00000578373 SFTPBP07988 381 aa11.27□□□□□ -0.61
ERBB2-206ENST00000578373 UCHL1P09936 223 aa11.27□□□□□ -0.61
ERBB2-206ENST00000578373 ZNF806P0C7X5 589 aa11.27□□□□□ -0.61
ERBB2-206ENST00000578373 MAPK3P27361 379 aaPredicted RBP11.27□□□□□ -0.61
ERBB2-206ENST00000578373 NTSR1P30989 418 aa11.27□□□□□ -0.61
ERBB2-206ENST00000578373 HNRNPFP52597 415 aaKnown RBP11.27□□□□□ -0.61
ERBB2-206ENST00000578373 ART1P52961 327 aa11.27□□□□□ -0.61
ERBB2-206ENST00000578373 HHEXQ03014 270 aa11.27□□□□□ -0.61
ERBB2-206ENST00000578373 ZMAT1Q5H9K5 638 aa11.27□□□□□ -0.61
ERBB2-206ENST00000578373 ULK3Q6PHR2 472 aa11.27□□□□□ -0.61
ERBB2-206ENST00000578373 TMEM64Q6YI46 380 aa11.27□□□□□ -0.61
ERBB2-206ENST00000578373 MSRB3Q8IXL7 192 aa11.27□□□□□ -0.61
ERBB2-206ENST00000578373 OR5H6Q8NGV6 325 aa11.27□□□□□ -0.61
ERBB2-206ENST00000578373 DYNC2LI1Q8TCX1 351 aa11.27□□□□□ -0.61
ERBB2-206ENST00000578373 UBTD2Q8WUN7 234 aa11.27□□□□□ -0.61
ERBB2-206ENST00000578373 MNTQ99583 582 aa11.27□□□□□ -0.61
ERBB2-206ENST00000578373 ORAI3Q9BRQ5 295 aa11.27□□□□□ -0.61
ERBB2-206ENST00000578373 APOOQ9BUR5 198 aa11.27□□□□□ -0.61
ERBB2-206ENST00000578373 CACNG2Q9Y698 323 aa11.27□□□□□ -0.61
ERBB2-206ENST00000578373 A8MVJ9 347 aa11.27□□□□□ -0.61
ERBB2-206ENST00000578373 RP2O75695 350 aa11.27□□□□□ -0.61
ERBB2-206ENST00000578373 SLCO2B1O94956 709 aa11.27□□□□□ -0.61
ERBB2-206ENST00000578373 NDUFB2O95178 105 aa11.27□□□□□ -0.61
ERBB2-206ENST00000578373 CFIP05156 583 aa11.27□□□□□ -0.61
ERBB2-206ENST00000578373 RASGEF1BQ0VAM2 473 aa11.27□□□□□ -0.61
ERBB2-206ENST00000578373 IHHQ14623 411 aa11.27□□□□□ -0.61
ERBB2-206ENST00000578373 P2RY14Q15391 338 aa11.27□□□□□ -0.61
ERBB2-206ENST00000578373 PCGF3Q3KNV8 242 aa11.27□□□□□ -0.61
ERBB2-206ENST00000578373 CFAP77Q6ZQR2 320 aa11.27□□□□□ -0.61
ERBB2-206ENST00000578373 STX12Q86Y82 276 aa11.27□□□□□ -0.61
ERBB2-206ENST00000578373 NKAIN4Q8IVV8 208 aa11.27□□□□□ -0.61
ERBB2-206ENST00000578373 OR9A4Q8NGU2 314 aa11.27□□□□□ -0.61
ERBB2-206ENST00000578373 FAM46BQ96A09 425 aa11.27□□□□□ -0.61
ERBB2-206ENST00000578373 DUS3LQ96G46 650 aaKnown RBP11.27□□□□□ -0.61
ERBB2-206ENST00000578373 ATP13A2Q9NQ11 1180 aa11.27□□□□□ -0.61
ERBB2-206ENST00000578373 TAAR2Q9P1P5 351 aa11.27□□□□□ -0.61
ERBB2-206ENST00000578373 APOBEC3BQ9UH17 382 aaKnown RBP11.27□□□□□ -0.61
ERBB2-206ENST00000578373 ERVK-19Q9WJR5 959 aa11.27□□□□□ -0.61
ERBB2-206ENST00000578373 RCE1Q9Y256 329 aa11.27□□□□□ -0.61
ERBB2-206ENST00000578373 NAALAD2Q9Y3Q0 740 aa11.27□□□□□ -0.61
ERBB2-206ENST00000578373 PRKNO60260 465 aaPredicted RBP11.27□□□□□ -0.61
ERBB2-206ENST00000578373 MRPS14O60783 128 aaKnown RBP11.27□□□□□ -0.61
ERBB2-206ENST00000578373 AMY2AP04746 511 aa11.27□□□□□ -0.61
ERBB2-206ENST00000578373 AKR1C4P17516 323 aa11.27□□□□□ -0.61
ERBB2-206ENST00000578373 MMP12P39900 470 aa11.27□□□□□ -0.61
ERBB2-206ENST00000578373 ILKQ13418 452 aa11.27□□□□□ -0.61
ERBB2-206ENST00000578373 CRMP1Q14194 572 aa11.27□□□□□ -0.61
ERBB2-206ENST00000578373 NKAPLQ5M9Q1 402 aa11.27□□□□□ -0.61
ERBB2-206ENST00000578373 PYHIN1Q6K0P9 492 aa11.27□□□□□ -0.61
ERBB2-206ENST00000578373 LIMS2Q7Z4I7 341 aa11.27□□□□□ -0.61
ERBB2-206ENST00000578373 NPRL2Q8WTW4 380 aa11.27□□□□□ -0.61
ERBB2-206ENST00000578373 NR4A3Q92570 626 aa11.27□□□□□ -0.61
ERBB2-206ENST00000578373 RBP7Q96R05 134 aa11.27□□□□□ -0.61
ERBB2-206ENST00000578373 TNFRSF13CQ96RJ3 184 aa11.27□□□□□ -0.61
ERBB2-206ENST00000578373 CD93Q9NPY3 652 aa11.27□□□□□ -0.61
ERBB2-206ENST00000578373 EVA1BQ9NVM1 165 aa11.27□□□□□ -0.61
ERBB2-206ENST00000578373 MRPS17Q9Y2R5 130 aaKnown RBP11.27□□□□□ -0.61
ERBB2-206ENST00000578373 HYAL3O43820 417 aaPredicted RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms