RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 ZNF180Q9UJW8 692 aa10.34□□□□□ -0.75
CTDNEP1-212ENST00000576613 TIMM22Q9Y584 194 aa10.34□□□□□ -0.75
CTDNEP1-212ENST00000576613 FAM234BA2RU67 622 aa10.33□□□□□ -0.76
CTDNEP1-212ENST00000576613 DPRXA6NFQ7 191 aa10.33□□□□□ -0.76
CTDNEP1-212ENST00000576613 POC1B-GALNT4F8VUJ3 575 aa10.33□□□□□ -0.76
CTDNEP1-212ENST00000576613 KIF2AO00139 706 aaPredicted RBP10.33□□□□□ -0.76
CTDNEP1-212ENST00000576613 HAX1O00165 279 aa10.33□□□□□ -0.76
CTDNEP1-212ENST00000576613 PDPK1O15530 556 aa10.33□□□□□ -0.76
CTDNEP1-212ENST00000576613 GPRIN2O60269 458 aa10.33□□□□□ -0.76
CTDNEP1-212ENST00000576613 HSPA4LO95757 839 aa10.33□□□□□ -0.76
CTDNEP1-212ENST00000576613 CD8AP01732 235 aa10.33□□□□□ -0.76
CTDNEP1-212ENST00000576613 SNRPAP09012 282 aaKnown RBP10.33□□□□□ -0.76
CTDNEP1-212ENST00000576613 LINGO3P0C6S8 592 aa10.33□□□□□ -0.76
CTDNEP1-212ENST00000576613 ATP5F1P24539 256 aaPredicted RBP10.33□□□□□ -0.76
CTDNEP1-212ENST00000576613 LCN1P31025 176 aa10.33□□□□□ -0.76
CTDNEP1-212ENST00000576613 SERPINB4P48594 390 aa10.33□□□□□ -0.76
CTDNEP1-212ENST00000576613 PRKAG1P54619 331 aa10.33□□□□□ -0.76
CTDNEP1-212ENST00000576613 MANFP55145 182 aaKnown RBP10.33□□□□□ -0.76
CTDNEP1-212ENST00000576613 CASP9P55211 416 aa10.33□□□□□ -0.76
CTDNEP1-212ENST00000576613 VLDLRP98155 873 aa10.33□□□□□ -0.76
CTDNEP1-212ENST00000576613 PPA1Q15181 289 aa10.33□□□□□ -0.76
CTDNEP1-212ENST00000576613 C8orf74Q6P047 294 aa10.33□□□□□ -0.76
CTDNEP1-212ENST00000576613 SEZ6L2Q6UXD5 910 aa10.33□□□□□ -0.76
CTDNEP1-212ENST00000576613 Q6ZT83 130 aa10.33□□□□□ -0.76
CTDNEP1-212ENST00000576613 LCA5Q86VQ0 697 aa10.33□□□□□ -0.76
CTDNEP1-212ENST00000576613 SLC43A2Q8N370 569 aa10.33□□□□□ -0.76
CTDNEP1-212ENST00000576613 B4GALNT2Q8NHY0 566 aa10.33□□□□□ -0.76
CTDNEP1-212ENST00000576613 ZFP28Q8NHY6 868 aa10.33□□□□□ -0.76
CTDNEP1-212ENST00000576613 POC1BQ8TC44 478 aa10.33□□□□□ -0.76
CTDNEP1-212ENST00000576613 HOXB13Q92826 284 aaPredicted RBP10.33□□□□□ -0.76
CTDNEP1-212ENST00000576613 MS4A4EQ96PG1 132 aa10.33□□□□□ -0.76
CTDNEP1-212ENST00000576613 TNFRSF13CQ96RJ3 184 aa10.33□□□□□ -0.76
CTDNEP1-212ENST00000576613 KCNA7Q96RP8 456 aa10.33□□□□□ -0.76
CTDNEP1-212ENST00000576613 CDC42EP4Q9H3Q1 356 aaKnown RBP10.33□□□□□ -0.76
CTDNEP1-212ENST00000576613 KLHL9Q9P2J3 617 aa10.33□□□□□ -0.76
CTDNEP1-212ENST00000576613 B3GALT5Q9Y2C3 310 aa10.33□□□□□ -0.76
CTDNEP1-212ENST00000576613 POLR3HQ9Y535 204 aaPredicted RBP10.33□□□□□ -0.76
CTDNEP1-212ENST00000576613 A0A1W2PQD3 144 aa10.32□□□□□ -0.76
CTDNEP1-212ENST00000576613 ABCD4O14678 606 aa10.32□□□□□ -0.76
CTDNEP1-212ENST00000576613 RAMP1O60894 148 aa10.32□□□□□ -0.76
CTDNEP1-212ENST00000576613 LYZL6O75951 148 aa10.32□□□□□ -0.76
CTDNEP1-212ENST00000576613 KCNK2O95069 426 aa10.32□□□□□ -0.76
CTDNEP1-212ENST00000576613 NTN1O95631 604 aa10.32□□□□□ -0.76
CTDNEP1-212ENST00000576613 NUDT14O95848 222 aa10.32□□□□□ -0.76
CTDNEP1-212ENST00000576613 SLC25A16P16260 332 aa10.32□□□□□ -0.76
CTDNEP1-212ENST00000576613 THBS2P35442 1172 aa10.32□□□□□ -0.76
CTDNEP1-212ENST00000576613 MAP3K8P41279 467 aa10.32□□□□□ -0.76
CTDNEP1-212ENST00000576613 PRIM2P49643 509 aa10.32□□□□□ -0.76
CTDNEP1-212ENST00000576613 PRKAA2P54646 552 aa10.32□□□□□ -0.76
CTDNEP1-212ENST00000576613 C21orf58P58505 322 aa10.32□□□□□ -0.76
CTDNEP1-212ENST00000576613 SLC7A5Q01650 507 aa10.32□□□□□ -0.76
CTDNEP1-212ENST00000576613 LOXL1Q08397 574 aaPredicted RBP10.32□□□□□ -0.76
CTDNEP1-212ENST00000576613 FOXF1Q12946 379 aa10.32□□□□□ -0.76
CTDNEP1-212ENST00000576613 TIMM23BQ5SRD1 257 aa10.32□□□□□ -0.76
CTDNEP1-212ENST00000576613 UBAP2Q5T6F2 1119 aaKnown RBP10.32□□□□□ -0.76
CTDNEP1-212ENST00000576613 NOXRED1Q6NXP6 359 aa10.32□□□□□ -0.76
CTDNEP1-212ENST00000576613 ZNF551Q7Z340 670 aaPredicted RBP10.32□□□□□ -0.76
CTDNEP1-212ENST00000576613 P2RY8Q86VZ1 359 aa10.32□□□□□ -0.76
CTDNEP1-212ENST00000576613 COX18Q8N8Q8 333 aa10.32□□□□□ -0.76
CTDNEP1-212ENST00000576613 OR10H5Q8NGA6 315 aa10.32□□□□□ -0.76
CTDNEP1-212ENST00000576613 FBXO30Q8TB52 745 aa10.32□□□□□ -0.76
CTDNEP1-212ENST00000576613 ZFP90Q8TF47 636 aa10.32□□□□□ -0.76
CTDNEP1-212ENST00000576613 DCAKDQ8WVC6 231 aa10.32□□□□□ -0.76
CTDNEP1-212ENST00000576613 L3HYPDHQ96EM0 354 aa10.32□□□□□ -0.76
CTDNEP1-212ENST00000576613 CACNG6Q9BXT2 260 aa10.32□□□□□ -0.76
CTDNEP1-212ENST00000576613 SRXN1Q9BYN0 137 aa10.32□□□□□ -0.76
CTDNEP1-212ENST00000576613 SHARPINQ9H0F6 387 aa10.32□□□□□ -0.76
CTDNEP1-212ENST00000576613 MID1IP1Q9NPA3 183 aa10.32□□□□□ -0.76
CTDNEP1-212ENST00000576613 TMEM216Q9P0N5 145 aa10.32□□□□□ -0.76
CTDNEP1-212ENST00000576613 GPC6Q9Y625 555 aaPredicted RBP10.32□□□□□ -0.76
CTDNEP1-212ENST00000576613 A0A096LNT2 108 aa10.31□□□□□ -0.76
CTDNEP1-212ENST00000576613 ELOA3DA6NLF2 546 aaPredicted RBP10.31□□□□□ -0.76
CTDNEP1-212ENST00000576613 SHISA9B4DS77 424 aa10.31□□□□□ -0.76
CTDNEP1-212ENST00000576613 ZNF814B7Z6K7 855 aa10.31□□□□□ -0.76
CTDNEP1-212ENST00000576613 H3BNH8 94 aa10.31□□□□□ -0.76
CTDNEP1-212ENST00000576613 H3BQF6 201 aa10.31□□□□□ -0.76
CTDNEP1-212ENST00000576613 UBFD1O14562 309 aaKnown RBP10.31□□□□□ -0.76
CTDNEP1-212ENST00000576613 CRCPO75575 148 aa10.31□□□□□ -0.76
CTDNEP1-212ENST00000576613 RSL1D1O76021 490 aaKnown RBP10.31□□□□□ -0.76
CTDNEP1-212ENST00000576613 GGT1P19440 569 aa10.31□□□□□ -0.76
CTDNEP1-212ENST00000576613 SHC1P29353 583 aa10.31□□□□□ -0.76
CTDNEP1-212ENST00000576613 SLC7A1P30825 629 aa10.31□□□□□ -0.76
CTDNEP1-212ENST00000576613 CASQ1P31415 396 aa10.31□□□□□ -0.76
CTDNEP1-212ENST00000576613 OR3A2P47893 321 aa10.31□□□□□ -0.76
CTDNEP1-212ENST00000576613 RAB35Q15286 201 aa10.31□□□□□ -0.76
CTDNEP1-212ENST00000576613 DUSP5Q16690 384 aa10.31□□□□□ -0.76
CTDNEP1-212ENST00000576613 KRTAP24-1Q3LI83 254 aa10.31□□□□□ -0.76
CTDNEP1-212ENST00000576613 ELOA3BQ3SY89 546 aa10.31□□□□□ -0.76
CTDNEP1-212ENST00000576613 ZCCHC12Q6PEW1 402 aa10.31□□□□□ -0.76
CTDNEP1-212ENST00000576613 TMEM108Q6UXF1 575 aa10.31□□□□□ -0.76
CTDNEP1-212ENST00000576613 TRIM46Q7Z4K8 759 aa10.31□□□□□ -0.76
CTDNEP1-212ENST00000576613 MTERF4Q7Z6M4 381 aaKnown RBP10.31□□□□□ -0.76
CTDNEP1-212ENST00000576613 PIAS4Q8N2W9 510 aaPredicted RBP10.31□□□□□ -0.76
CTDNEP1-212ENST00000576613 ZNF527Q8NB42 609 aa10.31□□□□□ -0.76
CTDNEP1-212ENST00000576613 SLC16A11Q8NCK7 471 aa10.31□□□□□ -0.76
CTDNEP1-212ENST00000576613 NUP43Q8NFH3 380 aa10.31□□□□□ -0.76
CTDNEP1-212ENST00000576613 ELOA3Q8NG57 546 aa10.31□□□□□ -0.76
CTDNEP1-212ENST00000576613 OR2W6PQ8NHA6 318 aa10.31□□□□□ -0.76
CTDNEP1-212ENST00000576613 FAM110BQ8TC76 370 aa10.31□□□□□ -0.76
CTDNEP1-212ENST00000576613 ZNF764Q96H86 408 aaPredicted RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms