RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 DDX18Q9NVP1 670 aaKnown RBP14.33□□□□□ -0.12
CTDNEP1-211ENST00000575783 TMEFF2Q9UIK5 374 aaPredicted RBP14.33□□□□□ -0.12
CTDNEP1-211ENST00000575783 A0A087WV62 115 aa14.32□□□□□ -0.12
CTDNEP1-211ENST00000575783 CCDC189A1A4V9 331 aa14.32□□□□□ -0.12
CTDNEP1-211ENST00000575783 ALG1L2C9J202 215 aa14.32□□□□□ -0.12
CTDNEP1-211ENST00000575783 PCDH7O60245 1069 aa14.32□□□□□ -0.12
CTDNEP1-211ENST00000575783 KLHL2O95198 593 aa14.32□□□□□ -0.12
CTDNEP1-211ENST00000575783 PGM3O95394 542 aa14.32□□□□□ -0.12
CTDNEP1-211ENST00000575783 TSPAN8P19075 237 aa14.32□□□□□ -0.12
CTDNEP1-211ENST00000575783 GGTA1PQ4G0N0 100 aa14.32□□□□□ -0.12
CTDNEP1-211ENST00000575783 TCHHL1Q5QJ38 904 aaPredicted RBP14.32□□□□□ -0.12
CTDNEP1-211ENST00000575783 MROH9Q5TGP6 573 aa14.32□□□□□ -0.12
CTDNEP1-211ENST00000575783 LETMD1Q6P1Q0 360 aa14.32□□□□□ -0.12
CTDNEP1-211ENST00000575783 SLC43A2Q8N370 569 aa14.32□□□□□ -0.12
CTDNEP1-211ENST00000575783 C16orf78Q8WTQ4 265 aa14.32□□□□□ -0.12
CTDNEP1-211ENST00000575783 GPR78Q96P69 363 aa14.32□□□□□ -0.12
CTDNEP1-211ENST00000575783 TRMOQ9BU70 441 aa14.32□□□□□ -0.12
CTDNEP1-211ENST00000575783 MYNNQ9NPC7 610 aa14.32□□□□□ -0.12
CTDNEP1-211ENST00000575783 SNX12Q9UMY4 172 aa14.32□□□□□ -0.12
CTDNEP1-211ENST00000575783 FKBP7Q9Y680 259 aa14.32□□□□□ -0.12
CTDNEP1-211ENST00000575783 CIB4A0PJX0 185 aa14.31□□□□□ -0.12
CTDNEP1-211ENST00000575783 LRP5LA4QPB2 252 aa14.31□□□□□ -0.12
CTDNEP1-211ENST00000575783 MYO1GB0I1T2 1018 aa14.31□□□□□ -0.12
CTDNEP1-211ENST00000575783 EFNA2O43921 213 aa14.31□□□□□ -0.12
CTDNEP1-211ENST00000575783 RAD51DO75771 328 aa14.31□□□□□ -0.12
CTDNEP1-211ENST00000575783 OXSR1O95747 527 aaPredicted RBP14.31□□□□□ -0.12
CTDNEP1-211ENST00000575783 CHN1P15882 459 aa14.31□□□□□ -0.12
CTDNEP1-211ENST00000575783 ZNF23P17027 643 aa14.31□□□□□ -0.12
CTDNEP1-211ENST00000575783 RAE1P78406 368 aaKnown RBP14.31□□□□□ -0.12
CTDNEP1-211ENST00000575783 PRSS53Q2L4Q9 553 aa14.31□□□□□ -0.12
CTDNEP1-211ENST00000575783 ZNF100Q8IYN0 542 aa14.31□□□□□ -0.12
CTDNEP1-211ENST00000575783 SLC35F6Q8N357 371 aa14.31□□□□□ -0.12
CTDNEP1-211ENST00000575783 ZNF433Q8N7K0 673 aaPredicted RBP14.31□□□□□ -0.12
CTDNEP1-211ENST00000575783 GPR151Q8TDV0 419 aa14.31□□□□□ -0.12
CTDNEP1-211ENST00000575783 GCDHQ92947 438 aaPredicted RBP14.31□□□□□ -0.12
CTDNEP1-211ENST00000575783 MRRFQ96E11 262 aaKnown RBP14.31□□□□□ -0.12
CTDNEP1-211ENST00000575783 FBXO17Q96EF6 278 aa14.31□□□□□ -0.12
CTDNEP1-211ENST00000575783 LMF2Q9BU23 707 aaKnown RBP14.31□□□□□ -0.12
CTDNEP1-211ENST00000575783 HHATLQ9HCP6 504 aa14.31□□□□□ -0.12
CTDNEP1-211ENST00000575783 EQTNQ9NQ60 294 aa14.31□□□□□ -0.12
CTDNEP1-211ENST00000575783 KLHL9Q9P2J3 617 aa14.31□□□□□ -0.12
CTDNEP1-211ENST00000575783 METRNQ9UJH8 293 aa14.31□□□□□ -0.12
CTDNEP1-211ENST00000575783 A0A096LPK6 155 aa14.3□□□□□ -0.12
CTDNEP1-211ENST00000575783 LOC390937A0A1W2PQ73 354 aa14.3□□□□□ -0.12
CTDNEP1-211ENST00000575783 CCT8L1PA6NM43 557 aa14.3□□□□□ -0.12
CTDNEP1-211ENST00000575783 GJE1A6NN92 205 aa14.3□□□□□ -0.12
CTDNEP1-211ENST00000575783 ZNF195O14628 629 aa14.3□□□□□ -0.12
CTDNEP1-211ENST00000575783 SMAD9O15198 467 aaKnown RBP14.3□□□□□ -0.12
CTDNEP1-211ENST00000575783 OTCP00480 354 aa14.3□□□□□ -0.12
CTDNEP1-211ENST00000575783 IGHV3-9P01782 118 aa14.3□□□□□ -0.12
CTDNEP1-211ENST00000575783 LINGO3P0C6S8 592 aa14.3□□□□□ -0.12
CTDNEP1-211ENST00000575783 HPGDP15428 266 aa14.3□□□□□ -0.12
CTDNEP1-211ENST00000575783 COX5AP20674 150 aa14.3□□□□□ -0.12
CTDNEP1-211ENST00000575783 APOBEC3AP31941 199 aaPredicted RBP14.3□□□□□ -0.12
CTDNEP1-211ENST00000575783 EIF1P41567 113 aaKnown RBP14.3□□□□□ -0.12
CTDNEP1-211ENST00000575783 PRIM2P49643 509 aa14.3□□□□□ -0.12
CTDNEP1-211ENST00000575783 CDH13P55290 713 aa14.3□□□□□ -0.12
CTDNEP1-211ENST00000575783 RASGEF1BQ0VAM2 473 aa14.3□□□□□ -0.12
CTDNEP1-211ENST00000575783 FOXF1Q12946 379 aa14.3□□□□□ -0.12
CTDNEP1-211ENST00000575783 SLC29A2Q14542 456 aa14.3□□□□□ -0.12
CTDNEP1-211ENST00000575783 PDLIM3Q53GG5 364 aaPredicted RBP14.3□□□□□ -0.12
CTDNEP1-211ENST00000575783 GLE1Q53GS7 698 aaKnown RBP14.3□□□□□ -0.12
CTDNEP1-211ENST00000575783 ARL13AQ5H913 290 aaPredicted RBP14.3□□□□□ -0.12
CTDNEP1-211ENST00000575783 CCDC91Q7Z6B0 441 aa14.3□□□□□ -0.12
CTDNEP1-211ENST00000575783 UBE2J2Q8N2K1 259 aa14.3□□□□□ -0.12
CTDNEP1-211ENST00000575783 OR2L13Q8N349 312 aa14.3□□□□□ -0.12
CTDNEP1-211ENST00000575783 B4GALNT2Q8NHY0 566 aa14.3□□□□□ -0.12
CTDNEP1-211ENST00000575783 CDC26Q8NHZ8 85 aa14.3□□□□□ -0.12
CTDNEP1-211ENST00000575783 SORCS2Q96PQ0 1159 aa14.3□□□□□ -0.12
CTDNEP1-211ENST00000575783 PSD2Q9BQI7 771 aa14.3□□□□□ -0.12
CTDNEP1-211ENST00000575783 EBPLQ9BY08 206 aa14.3□□□□□ -0.12
CTDNEP1-211ENST00000575783 BPESC1Q9GZL8 116 aa14.3□□□□□ -0.12
CTDNEP1-211ENST00000575783 VPS11Q9H270 941 aa14.3□□□□□ -0.12
CTDNEP1-211ENST00000575783 BCO1Q9HAY6 547 aa14.3□□□□□ -0.12
CTDNEP1-211ENST00000575783 ING1Q9UK53 422 aaPredicted RBP14.3□□□□□ -0.12
CTDNEP1-211ENST00000575783 SLC25A15Q9Y619 301 aa14.3□□□□□ -0.12
CTDNEP1-211ENST00000575783 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.3□□□□□ -0.121e-7■□□□□ 8.6
CTDNEP1-211ENST00000575783 DYSFO75923 2080 aa14.29□□□□□ -0.12
CTDNEP1-211ENST00000575783 NPIPA5A0A0B4J1W7 369 aa14.29□□□□□ -0.12
CTDNEP1-211ENST00000575783 NPIPA7E9PJI5 369 aa14.29□□□□□ -0.12
CTDNEP1-211ENST00000575783 PSMG1O95456 288 aa14.29□□□□□ -0.12
CTDNEP1-211ENST00000575783 NPIPA8P0DM63 369 aa14.29□□□□□ -0.12
CTDNEP1-211ENST00000575783 CREB1P16220 341 aa14.29□□□□□ -0.12
CTDNEP1-211ENST00000575783 COMPP49747 757 aaPredicted RBP14.29□□□□□ -0.12
CTDNEP1-211ENST00000575783 MRPS25P82663 173 aaKnown RBP14.29□□□□□ -0.12
CTDNEP1-211ENST00000575783 C2orf80Q0P641 193 aa14.29□□□□□ -0.12
CTDNEP1-211ENST00000575783 TECRLQ5HYJ1 363 aa14.29□□□□□ -0.12
CTDNEP1-211ENST00000575783 MMGT1Q8N4V1 131 aa14.29□□□□□ -0.12
CTDNEP1-211ENST00000575783 ANKS4BQ8N8V4 417 aa14.29□□□□□ -0.12
CTDNEP1-211ENST00000575783 FBXO27Q8NI29 283 aa14.29□□□□□ -0.12
CTDNEP1-211ENST00000575783 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.29□□□□□ -0.126e-11■■■■■ 32.3
CTDNEP1-211ENST00000575783 FBF1Q8TES7 1133 aa14.29□□□□□ -0.12
CTDNEP1-211ENST00000575783 ZFAND2BQ8WV99 257 aa14.29□□□□□ -0.12
CTDNEP1-211ENST00000575783 ELP4Q96EB1 424 aa14.29□□□□□ -0.12
CTDNEP1-211ENST00000575783 ZNF300Q96RE9 604 aaPredicted RBP14.29□□□□□ -0.12
CTDNEP1-211ENST00000575783 VRK1Q99986 396 aaPredicted RBP14.29□□□□□ -0.12
CTDNEP1-211ENST00000575783 GLIPR2Q9H4G4 154 aa14.29□□□□□ -0.12
CTDNEP1-211ENST00000575783 NTMQ9P121 344 aa14.29□□□□□ -0.12
CTDNEP1-211ENST00000575783 PLCE1Q9P212 2302 aa14.29□□□□□ -0.12
CTDNEP1-211ENST00000575783 STX16-NPEPL1H3BU86 382 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms