RNA–Protein interactions for RNA: ENST00000575426.1

LITAF-217, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5

Gene LITAF, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-217ENST00000575426 ZNF117Q03924 483 aa13.79□□□□□ -0.2
LITAF-217ENST00000575426 FGFBP1Q14512 234 aa13.79□□□□□ -0.2
LITAF-217ENST00000575426 RUNDC3AQ59EK9 446 aa13.79□□□□□ -0.2
LITAF-217ENST00000575426 GCNT6Q5T4J0 391 aa13.79□□□□□ -0.2
LITAF-217ENST00000575426 AP1ARQ63HQ0 302 aa13.79□□□□□ -0.2
LITAF-217ENST00000575426 CLEC18BQ6UXF7 455 aa13.79□□□□□ -0.2
LITAF-217ENST00000575426 MTDHQ86UE4 582 aaKnown RBP13.79□□□□□ -0.2
LITAF-217ENST00000575426 SNX32Q86XE0 403 aa13.79□□□□□ -0.2
LITAF-217ENST00000575426 MSRB3Q8IXL7 192 aa13.79□□□□□ -0.2
LITAF-217ENST00000575426 CLEC18CQ8NCF0 446 aa13.79□□□□□ -0.2
LITAF-217ENST00000575426 TOR1AIP2Q8NFQ8 470 aa13.79□□□□□ -0.2
LITAF-217ENST00000575426 ANKRD27Q96NW4 1050 aa13.79□□□□□ -0.2
LITAF-217ENST00000575426 LAT2Q9GZY6 243 aa13.79□□□□□ -0.2
LITAF-217ENST00000575426 SLC38A1Q9H2H9 487 aa13.79□□□□□ -0.2
LITAF-217ENST00000575426 GID8Q9NWU2 228 aa13.79□□□□□ -0.2
LITAF-217ENST00000575426 ARMCX1Q9P291 453 aa13.79□□□□□ -0.2
LITAF-217ENST00000575426 ZNF232Q9UNY5 417 aa13.79□□□□□ -0.2
LITAF-217ENST00000575426 GMEB1Q9Y692 573 aa13.79□□□□□ -0.2
LITAF-217ENST00000575426 TRBV5-3A0A0A0MS03 114 aa13.78□□□□□ -0.2
LITAF-217ENST00000575426 A0A0G2JPF8 293 aa13.78□□□□□ -0.2
LITAF-217ENST00000575426 HNRNPCL2B2RXH8 293 aa13.78□□□□□ -0.2
LITAF-217ENST00000575426 B4DXG7 233 aa13.78□□□□□ -0.2
LITAF-217ENST00000575426 HNRNPCL3B7ZW38 293 aa13.78□□□□□ -0.2
LITAF-217ENST00000575426 MRASO14807 208 aa13.78□□□□□ -0.2
LITAF-217ENST00000575426 HNRNPCL1O60812 293 aaKnown RBP13.78□□□□□ -0.2
LITAF-217ENST00000575426 ZIC2O95409 532 aaPredicted RBP13.78□□□□□ -0.2
LITAF-217ENST00000575426 LDLRP01130 860 aa13.78□□□□□ -0.2
LITAF-217ENST00000575426 NPPAP01160 153 aa13.78□□□□□ -0.2
LITAF-217ENST00000575426 DBIP07108 87 aaKnown RBP13.78□□□□□ -0.2
LITAF-217ENST00000575426 HNRNPCL4P0DMR1 293 aa13.78□□□□□ -0.2
LITAF-217ENST00000575426 BMP2P12643 396 aa13.78□□□□□ -0.2
LITAF-217ENST00000575426 PEPDP12955 493 aa13.78□□□□□ -0.2
LITAF-217ENST00000575426 GPX2P18283 190 aa13.78□□□□□ -0.2
LITAF-217ENST00000575426 CCR4P51679 360 aa13.78□□□□□ -0.2
LITAF-217ENST00000575426 GFRA1P56159 465 aa13.78□□□□□ -0.2
LITAF-217ENST00000575426 KCNJ10P78508 379 aa13.78□□□□□ -0.2
LITAF-217ENST00000575426 SRYQ05066 204 aa13.78□□□□□ -0.2
LITAF-217ENST00000575426 CBFBQ13951 182 aa13.78□□□□□ -0.2
LITAF-217ENST00000575426 MAPK14Q16539 360 aa13.78□□□□□ -0.2
LITAF-217ENST00000575426 TRMT5Q32P41 509 aaKnown RBP13.78□□□□□ -0.2
LITAF-217ENST00000575426 COQ5Q5HYK3 327 aa13.78□□□□□ -0.2
LITAF-217ENST00000575426 EMC4Q5J8M3 183 aa13.78□□□□□ -0.2
LITAF-217ENST00000575426 C1orf185Q5T7R7 199 aa13.78□□□□□ -0.2
LITAF-217ENST00000575426 ARSKQ6UWY0 536 aa13.78□□□□□ -0.2
LITAF-217ENST00000575426 CHMP1BQ7LBR1 199 aa13.78□□□□□ -0.2
LITAF-217ENST00000575426 RETREG3Q86VR2 466 aa13.78□□□□□ -0.2
LITAF-217ENST00000575426 METTL25Q8N6Q8 603 aa13.78□□□□□ -0.2
LITAF-217ENST00000575426 RP9Q8TA86 221 aaKnown RBP13.78□□□□□ -0.2
LITAF-217ENST00000575426 PHF10Q8WUB8 498 aaKnown RBP13.78□□□□□ -0.2
LITAF-217ENST00000575426 SLC38A5Q8WUX1 472 aa13.78□□□□□ -0.2
LITAF-217ENST00000575426 WDR60Q8WVS4 1066 aa13.78□□□□□ -0.2
LITAF-217ENST00000575426 ZBTB8AQ96BR9 441 aa13.78□□□□□ -0.2
LITAF-217ENST00000575426 ZG16BQ96DA0 208 aa13.78□□□□□ -0.2
LITAF-217ENST00000575426 CCDC120Q96HB5 630 aa13.78□□□□□ -0.2
LITAF-217ENST00000575426 TMEM19Q96HH6 336 aa13.78□□□□□ -0.2
LITAF-217ENST00000575426 SH3GL1Q99961 368 aa13.78□□□□□ -0.2
LITAF-217ENST00000575426 CPPED1Q9BRF8 314 aaPredicted RBP13.78□□□□□ -0.2
LITAF-217ENST00000575426 ARMC7Q9H6L4 198 aa13.78□□□□□ -0.2
LITAF-217ENST00000575426 A4GALTQ9NPC4 353 aa13.78□□□□□ -0.2
LITAF-217ENST00000575426 KCNE5Q9UJ90 142 aa13.78□□□□□ -0.2
LITAF-217ENST00000575426 BAHCC1Q9P281 2608 aa13.77□□□□□ -0.2
LITAF-217ENST00000575426 OR2M5A3KFT3 312 aa13.77□□□□□ -0.21
LITAF-217ENST00000575426 AGAP5A6NIR3 686 aa13.77□□□□□ -0.21
LITAF-217ENST00000575426 H0Y3Z8 333 aa13.77□□□□□ -0.21
LITAF-217ENST00000575426 FBP2O00757 339 aa13.77□□□□□ -0.21
LITAF-217ENST00000575426 ZG16O60844 167 aa13.77□□□□□ -0.21
LITAF-217ENST00000575426 UBTFL6P0CB48 400 aaPredicted RBP13.77□□□□□ -0.21
LITAF-217ENST00000575426 CPN1P15169 458 aa13.77□□□□□ -0.21
LITAF-217ENST00000575426 POU3F2P20265 443 aaPredicted RBP13.77□□□□□ -0.21
LITAF-217ENST00000575426 SLC6A2P23975 617 aa13.77□□□□□ -0.21
LITAF-217ENST00000575426 EIF1P41567 113 aaKnown RBP13.77□□□□□ -0.21
LITAF-217ENST00000575426 STARP49675 285 aa13.77□□□□□ -0.21
LITAF-217ENST00000575426 EEFSECP57772 596 aaKnown RBP13.77□□□□□ -0.21
LITAF-217ENST00000575426 NCOA6Q14686 2063 aaPredicted RBP13.77□□□□□ -0.21
LITAF-217ENST00000575426 LARS2Q15031 903 aaKnown RBP13.77□□□□□ -0.21
LITAF-217ENST00000575426 BCL2A1Q16548 175 aa13.77□□□□□ -0.21
LITAF-217ENST00000575426 NDUFAF6Q330K2 333 aa13.77□□□□□ -0.21
LITAF-217ENST00000575426 PRAMEF8Q5VWM4 474 aa13.77□□□□□ -0.21
LITAF-217ENST00000575426 PRAMEF7Q5VXH5 474 aa13.77□□□□□ -0.21
LITAF-217ENST00000575426 REP15Q6BDI9 236 aa13.77□□□□□ -0.21
LITAF-217ENST00000575426 CBLN3Q6UW01 205 aa13.77□□□□□ -0.21
LITAF-217ENST00000575426 RPTNQ6XPR3 784 aa13.77□□□□□ -0.21
LITAF-217ENST00000575426 B3GNT6Q6ZMB0 384 aa13.77□□□□□ -0.21
LITAF-217ENST00000575426 HMGN2P46Q86SG4 172 aa13.77□□□□□ -0.21
LITAF-217ENST00000575426 CMIPQ8IY22 773 aa13.77□□□□□ -0.21
LITAF-217ENST00000575426 ULK2Q8IYT8 1036 aa13.77□□□□□ -0.21
LITAF-217ENST00000575426 OR10Q1Q8NGQ4 319 aa13.77□□□□□ -0.21
LITAF-217ENST00000575426 OR5W2Q8NH69 310 aa13.77□□□□□ -0.21
LITAF-217ENST00000575426 BBS10Q8TAM1 723 aa13.77□□□□□ -0.21
LITAF-217ENST00000575426 RND1Q92730 232 aa13.77□□□□□ -0.21
LITAF-217ENST00000575426 WDYHV1Q96HA8 205 aa13.77□□□□□ -0.21
LITAF-217ENST00000575426 PRDM14Q9GZV8 571 aa13.77□□□□□ -0.21
LITAF-217ENST00000575426 QRSL1Q9H0R6 528 aaKnown RBP13.77□□□□□ -0.21
LITAF-217ENST00000575426 RUBCNLQ9H714 662 aa13.77□□□□□ -0.21
LITAF-217ENST00000575426 MED17Q9NVC6 651 aa13.77□□□□□ -0.21
LITAF-217ENST00000575426 COQ3Q9NZJ6 369 aa13.77□□□□□ -0.21
LITAF-217ENST00000575426 ICAM5Q9UMF0 924 aa13.77□□□□□ -0.21
LITAF-217ENST00000575426 ARL2BPQ9Y2Y0 163 aa13.77□□□□□ -0.21
LITAF-217ENST00000575426 IFT52Q9Y366 437 aa13.77□□□□□ -0.21
LITAF-217ENST00000575426 ZNF337Q9Y3M9 751 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms