RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 C2CD3Q4AC94 2353 aa10.02□□□□□ -0.81
CHD3-216ENST00000573936 DCHS2Q6V1P9 2916 aa10.01□□□□□ -0.81
CHD3-216ENST00000573936 CELSR1Q9NYQ6 3014 aa10.01□□□□□ -0.81
CHD3-216ENST00000573936 A0A0G2JPF8 293 aa10.01□□□□□ -0.81
CHD3-216ENST00000573936 LOC100653049A0A140TA62 436 aa10.01□□□□□ -0.81
CHD3-216ENST00000573936 PRAMEF27A3QJZ7 478 aa10.01□□□□□ -0.81
CHD3-216ENST00000573936 FIGNL2A6NMB9 653 aa10.01□□□□□ -0.81
CHD3-216ENST00000573936 AHRRA9YTQ3 701 aa10.01□□□□□ -0.81
CHD3-216ENST00000573936 HNRNPCL2B2RXH8 293 aa10.01□□□□□ -0.81
CHD3-216ENST00000573936 HNRNPCL3B7ZW38 293 aa10.01□□□□□ -0.81
CHD3-216ENST00000573936 C5orf58C9J3I9 102 aa10.01□□□□□ -0.81
CHD3-216ENST00000573936 FBP2O00757 339 aa10.01□□□□□ -0.81
CHD3-216ENST00000573936 MRASO14807 208 aa10.01□□□□□ -0.81
CHD3-216ENST00000573936 ZNF264O43296 627 aa10.01□□□□□ -0.81
CHD3-216ENST00000573936 HNRNPRO43390 633 aaKnown RBP10.01□□□□□ -0.81
CHD3-216ENST00000573936 HCRTR2O43614 444 aa10.01□□□□□ -0.81
CHD3-216ENST00000573936 ZIC3O60481 467 aa10.01□□□□□ -0.81
CHD3-216ENST00000573936 HNRNPCL1O60812 293 aaKnown RBP10.01□□□□□ -0.81
CHD3-216ENST00000573936 DCTN3O75935 186 aa10.01□□□□□ -0.81
CHD3-216ENST00000573936 KRT34O76011 436 aa10.01□□□□□ -0.81
CHD3-216ENST00000573936 C1QCP02747 245 aa10.01□□□□□ -0.81
CHD3-216ENST00000573936 BCHEP06276 602 aa10.01□□□□□ -0.81
CHD3-216ENST00000573936 DBIP07108 87 aaKnown RBP10.01□□□□□ -0.81
CHD3-216ENST00000573936 CHRM4P08173 479 aa10.01□□□□□ -0.81
CHD3-216ENST00000573936 TFPTP0C1Z6 253 aa10.01□□□□□ -0.81
CHD3-216ENST00000573936 HNRNPCL4P0DMR1 293 aa10.01□□□□□ -0.81
CHD3-216ENST00000573936 UBL4AP11441 157 aa10.01□□□□□ -0.81
CHD3-216ENST00000573936 ESRRAP11474 423 aaPredicted RBP10.01□□□□□ -0.81
CHD3-216ENST00000573936 GABRA1P14867 456 aa10.01□□□□□ -0.81
CHD3-216ENST00000573936 CD1EP15812 388 aa10.01□□□□□ -0.81
CHD3-216ENST00000573936 CHMP24386 653 aa10.01□□□□□ -0.81
CHD3-216ENST00000573936 ZNF41P51814 821 aaPredicted RBP10.01□□□□□ -0.81
CHD3-216ENST00000573936 GABPB1Q06547 395 aaPredicted RBP10.01□□□□□ -0.81
CHD3-216ENST00000573936 FGFBP1Q14512 234 aa10.01□□□□□ -0.81
CHD3-216ENST00000573936 C3AR1Q16581 482 aa10.01□□□□□ -0.81
CHD3-216ENST00000573936 ZSWIM7Q19AV6 140 aa10.01□□□□□ -0.81
CHD3-216ENST00000573936 TRMT5Q32P41 509 aaKnown RBP10.01□□□□□ -0.81
CHD3-216ENST00000573936 GXYLT1Q4G148 440 aa10.01□□□□□ -0.81
CHD3-216ENST00000573936 GCNT6Q5T4J0 391 aa10.01□□□□□ -0.81
CHD3-216ENST00000573936 REP15Q6BDI9 236 aa10.01□□□□□ -0.81
CHD3-216ENST00000573936 VASNQ6EMK4 673 aa10.01□□□□□ -0.81
CHD3-216ENST00000573936 TMEM211Q6ICI0 200 aa10.01□□□□□ -0.81
CHD3-216ENST00000573936 ENPP6Q6UWR7 440 aa10.01□□□□□ -0.81
CHD3-216ENST00000573936 EIF3MQ7L2H7 374 aaKnown RBP10.01□□□□□ -0.81
CHD3-216ENST00000573936 CD163Q86VB7 1156 aa10.01□□□□□ -0.81
CHD3-216ENST00000573936 RETREG3Q86VR2 466 aa10.01□□□□□ -0.81
CHD3-216ENST00000573936 SNX32Q86XE0 403 aa10.01□□□□□ -0.81
CHD3-216ENST00000573936 CMIPQ8IY22 773 aa10.01□□□□□ -0.81
CHD3-216ENST00000573936 PEX5LQ8IYB4 626 aa10.01□□□□□ -0.81
CHD3-216ENST00000573936 ANKFN1Q8N957 763 aa10.01□□□□□ -0.81
CHD3-216ENST00000573936 TOR1AIP2Q8NFQ8 470 aa10.01□□□□□ -0.81
CHD3-216ENST00000573936 MARVELD3Q96A59 401 aa10.01□□□□□ -0.81
CHD3-216ENST00000573936 CMTM5Q96DZ9 223 aa10.01□□□□□ -0.81
CHD3-216ENST00000573936 PIGQQ9BRB3 760 aa10.01□□□□□ -0.81
CHD3-216ENST00000573936 CPPED1Q9BRF8 314 aaPredicted RBP10.01□□□□□ -0.81
CHD3-216ENST00000573936 THUMPD3Q9BV44 507 aaKnown RBP10.01□□□□□ -0.81
CHD3-216ENST00000573936 LAT2Q9GZY6 243 aa10.01□□□□□ -0.81
CHD3-216ENST00000573936 SLC38A1Q9H2H9 487 aa10.01□□□□□ -0.81
CHD3-216ENST00000573936 TP63Q9H3D4 680 aaPredicted RBP10.01□□□□□ -0.81
CHD3-216ENST00000573936 ARMC7Q9H6L4 198 aa10.01□□□□□ -0.81
CHD3-216ENST00000573936 STOML1Q9UBI4 398 aa10.01□□□□□ -0.81
CHD3-216ENST00000573936 PRDM4Q9UKN5 801 aa10.01□□□□□ -0.81
CHD3-216ENST00000573936 ZNF232Q9UNY5 417 aa10.01□□□□□ -0.81
CHD3-216ENST00000573936 IFT52Q9Y366 437 aa10.01□□□□□ -0.81
CHD3-216ENST00000573936 CSMD2Q7Z408 3487 aa10□□□□□ -0.81
CHD3-216ENST00000573936 AGAP5A6NIR3 686 aa10□□□□□ -0.81
CHD3-216ENST00000573936 E9PLN8 166 aa10□□□□□ -0.81
CHD3-216ENST00000573936 CCL21O00585 134 aa10□□□□□ -0.81
CHD3-216ENST00000573936 LRRTM2O43300 516 aa10□□□□□ -0.81
CHD3-216ENST00000573936 WDR1O75083 606 aa10□□□□□ -0.81
CHD3-216ENST00000573936 TNFRSF21O75509 655 aa10□□□□□ -0.81
CHD3-216ENST00000573936 CSTAP01040 98 aa10□□□□□ -0.81
CHD3-216ENST00000573936 ARAFP10398 606 aa10□□□□□ -0.81
CHD3-216ENST00000573936 COX4I1P13073 169 aa10□□□□□ -0.81
CHD3-216ENST00000573936 IL7RP16871 459 aa10□□□□□ -0.81
CHD3-216ENST00000573936 ZNF17P17021 662 aa10□□□□□ -0.81
CHD3-216ENST00000573936 BMP7P18075 431 aa10□□□□□ -0.81
CHD3-216ENST00000573936 SLC6A2P23975 617 aa10□□□□□ -0.81
CHD3-216ENST00000573936 PRDX6P30041 224 aa10□□□□□ -0.81
CHD3-216ENST00000573936 PTGER4P35408 488 aa10□□□□□ -0.81
CHD3-216ENST00000573936 GFRA1P56159 465 aa10□□□□□ -0.81
CHD3-216ENST00000573936 KCNJ10P78508 379 aa10□□□□□ -0.81
CHD3-216ENST00000573936 CRYZQ08257 329 aaKnown RBP10□□□□□ -0.81
CHD3-216ENST00000573936 RBBP4Q09028 425 aa10□□□□□ -0.81
CHD3-216ENST00000573936 CBFBQ13951 182 aa10□□□□□ -0.81
CHD3-216ENST00000573936 CD226Q15762 336 aa10□□□□□ -0.81
CHD3-216ENST00000573936 LIN52Q52LA3 116 aa10□□□□□ -0.81
CHD3-216ENST00000573936 FJX1Q86VR8 437 aa10□□□□□ -0.81
CHD3-216ENST00000573936 DOLPP1Q86YN1 238 aa10□□□□□ -0.81
CHD3-216ENST00000573936 TREML1Q86YW5 311 aa10□□□□□ -0.81
CHD3-216ENST00000573936 SLC30A8Q8IWU4 369 aa10□□□□□ -0.81
CHD3-216ENST00000573936 FITM2Q8N6M3 262 aa10□□□□□ -0.81
CHD3-216ENST00000573936 OR8J3Q8NGG0 315 aa10□□□□□ -0.81
CHD3-216ENST00000573936 OR5W2Q8NH69 310 aa10□□□□□ -0.81
CHD3-216ENST00000573936 BBS10Q8TAM1 723 aa10□□□□□ -0.81
CHD3-216ENST00000573936 SLC38A5Q8WUX1 472 aa10□□□□□ -0.81
CHD3-216ENST00000573936 WDR60Q8WVS4 1066 aa10□□□□□ -0.81
CHD3-216ENST00000573936 ZBTB8AQ96BR9 441 aa10□□□□□ -0.81
CHD3-216ENST00000573936 LRRC58Q96CX6 371 aa10□□□□□ -0.81
CHD3-216ENST00000573936 TMEM19Q96HH6 336 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms