RNA–Protein interactions for RNA: ENST00000572778.5

CHMP6-204, Transcript of charged multivesicular body protein 6, humanhuman

TSL 2

Gene CHMP6, Length 737 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-204ENST00000572778 NAXEQ8NCW5 288 aa18.67■□□□□ 0.58
CHMP6-204ENST00000572778 MBD3L2Q8NHZ7 208 aaPredicted RBP18.67■□□□□ 0.58
CHMP6-204ENST00000572778 GTF2H4Q92759 462 aa18.67■□□□□ 0.58
CHMP6-204ENST00000572778 MARVELD3Q96A59 401 aa18.67■□□□□ 0.58
CHMP6-204ENST00000572778 ZBTB8AQ96BR9 441 aa18.67■□□□□ 0.58
CHMP6-204ENST00000572778 TPT1P8Q9HAU6 139 aa18.67■□□□□ 0.58
CHMP6-204ENST00000572778 KCNE5Q9UJ90 142 aa18.67■□□□□ 0.58
CHMP6-204ENST00000572778 NUP214P35658 2090 aaPredicted RBP18.66■□□□□ 0.58
CHMP6-204ENST00000572778 CENPVL1A0A0U1RR11 272 aa18.66■□□□□ 0.58
CHMP6-204ENST00000572778 PRAMEF27A3QJZ7 478 aa18.66■□□□□ 0.58
CHMP6-204ENST00000572778 H0YC42 278 aa18.66■□□□□ 0.58
CHMP6-204ENST00000572778 KIAA0513O60268 411 aa18.66■□□□□ 0.58
CHMP6-204ENST00000572778 CYP7B1O75881 506 aa18.66■□□□□ 0.58
CHMP6-204ENST00000572778 H6PDO95479 791 aa18.66■□□□□ 0.58
CHMP6-204ENST00000572778 UBL4AP11441 157 aa18.66■□□□□ 0.58
CHMP6-204ENST00000572778 COX6B1P14854 86 aa18.66■□□□□ 0.58
CHMP6-204ENST00000572778 ATP4BP51164 291 aa18.66■□□□□ 0.58
CHMP6-204ENST00000572778 TPD52P55327 224 aaPredicted RBP18.66■□□□□ 0.58
CHMP6-204ENST00000572778 CLDN20P56880 219 aa18.66■□□□□ 0.58
CHMP6-204ENST00000572778 EEFSECP57772 596 aaKnown RBP18.66■□□□□ 0.58
CHMP6-204ENST00000572778 IRX1P78414 480 aaPredicted RBP18.66■□□□□ 0.58
CHMP6-204ENST00000572778 TXNL4AP83876 142 aaKnown RBP18.66■□□□□ 0.58
CHMP6-204ENST00000572778 SQLEQ14534 574 aa18.66■□□□□ 0.58
CHMP6-204ENST00000572778 SYPL1Q16563 259 aa18.66■□□□□ 0.58
CHMP6-204ENST00000572778 TMEM44Q2T9K0 475 aa18.66■□□□□ 0.58
CHMP6-204ENST00000572778 PLPPR5Q32ZL2 321 aa18.66■□□□□ 0.58
CHMP6-204ENST00000572778 AGKQ53H12 422 aa18.66■□□□□ 0.58
CHMP6-204ENST00000572778 FRRS1Q6ZNA5 592 aa18.66■□□□□ 0.58
CHMP6-204ENST00000572778 HMGN2P46Q86SG4 172 aa18.66■□□□□ 0.58
CHMP6-204ENST00000572778 ZNF619Q8N2I2 560 aa18.66■□□□□ 0.58
CHMP6-204ENST00000572778 ANKFN1Q8N957 763 aa18.66■□□□□ 0.58
CHMP6-204ENST00000572778 C9orf106Q8NAJ2 232 aa18.66■□□□□ 0.58
CHMP6-204ENST00000572778 SPDL1Q96EA4 605 aa18.66■□□□□ 0.58
CHMP6-204ENST00000572778 AURKBQ96GD4 344 aaPredicted RBP18.66■□□□□ 0.58
CHMP6-204ENST00000572778 RNF145Q96MT1 663 aa18.66■□□□□ 0.58
CHMP6-204ENST00000572778 NPAS1Q99742 590 aa18.66■□□□□ 0.58
CHMP6-204ENST00000572778 MED4Q9NPJ6 270 aa18.66■□□□□ 0.58
CHMP6-204ENST00000572778 POLE3Q9NRF9 147 aa18.66■□□□□ 0.58
CHMP6-204ENST00000572778 STOML1Q9UBI4 398 aa18.66■□□□□ 0.58
CHMP6-204ENST00000572778 LIPT1Q9Y234 373 aa18.66■□□□□ 0.58
CHMP6-204ENST00000572778 AP4B1Q9Y6B7 739 aa18.66■□□□□ 0.58
CHMP6-204ENST00000572778 FREM3P0C091 2139 aa18.65■□□□□ 0.58
CHMP6-204ENST00000572778 DVL2O14641 736 aa18.65■□□□□ 0.58
CHMP6-204ENST00000572778 ZNF264O43296 627 aa18.65■□□□□ 0.58
CHMP6-204ENST00000572778 CSTAP01040 98 aa18.65■□□□□ 0.58
CHMP6-204ENST00000572778 GUSBP08236 651 aa18.65■□□□□ 0.58
CHMP6-204ENST00000572778 NR2F1P10589 423 aa18.65■□□□□ 0.58
CHMP6-204ENST00000572778 ZNF17P17021 662 aa18.65■□□□□ 0.58
CHMP6-204ENST00000572778 BMP5P22003 454 aa18.65■□□□□ 0.58
CHMP6-204ENST00000572778 CRATP43155 626 aa18.65■□□□□ 0.58
CHMP6-204ENST00000572778 CCR4P51679 360 aa18.65■□□□□ 0.58
CHMP6-204ENST00000572778 SUCLG1P53597 346 aaKnown RBP18.65■□□□□ 0.58
CHMP6-204ENST00000572778 CHRNEQ04844 493 aa18.65■□□□□ 0.58
CHMP6-204ENST00000572778 MAPK14Q16539 360 aa18.65■□□□□ 0.58
CHMP6-204ENST00000572778 SLC25A35Q3KQZ1 300 aa18.65■□□□□ 0.58
CHMP6-204ENST00000572778 P4HA3Q7Z4N8 544 aa18.65■□□□□ 0.58
CHMP6-204ENST00000572778 ADGRE4PQ86SQ3 457 aa18.65■□□□□ 0.58
CHMP6-204ENST00000572778 GRAMD2AQ8IUY3 354 aa18.65■□□□□ 0.58
CHMP6-204ENST00000572778 GTPBP8Q8N3Z3 284 aaPredicted RBP18.65■□□□□ 0.58
CHMP6-204ENST00000572778 STON2Q8WXE9 905 aa18.65■□□□□ 0.58
CHMP6-204ENST00000572778 TRNT1Q96Q11 434 aaKnown RBP18.65■□□□□ 0.58
CHMP6-204ENST00000572778 TM9SF2Q99805 663 aa18.65■□□□□ 0.58
CHMP6-204ENST00000572778 SIKE1Q9BRV8 207 aa18.65■□□□□ 0.58
CHMP6-204ENST00000572778 SAP130Q9H0E3 1048 aa18.65■□□□□ 0.58
CHMP6-204ENST00000572778 ICAM5Q9UMF0 924 aa18.65■□□□□ 0.58
CHMP6-204ENST00000572778 TRIM33Q9UPN9 1127 aa18.65■□□□□ 0.58
CHMP6-204ENST00000572778 EIF4E2O60573 245 aaKnown RBP18.64■□□□□ 0.57
CHMP6-204ENST00000572778 VIMP08670 466 aaKnown RBP18.64■□□□□ 0.57
CHMP6-204ENST00000572778 LINGO3P0C6S8 592 aa18.64■□□□□ 0.57
CHMP6-204ENST00000572778 ETFAP13804 333 aa18.64■□□□□ 0.57
CHMP6-204ENST00000572778 AGFG1P52594 562 aaKnown RBP18.64■□□□□ 0.57
CHMP6-204ENST00000572778 ZNF136P52737 540 aa18.64■□□□□ 0.57
CHMP6-204ENST00000572778 SUMO3P55854 103 aaPredicted RBP18.64■□□□□ 0.57
CHMP6-204ENST00000572778 CLDN15P56746 228 aa18.64■□□□□ 0.57
CHMP6-204ENST00000572778 GUCY1A3Q02108 690 aa18.64■□□□□ 0.57
CHMP6-204ENST00000572778 EIF3MQ7L2H7 374 aaKnown RBP18.64■□□□□ 0.57
CHMP6-204ENST00000572778 TOR1AIP2Q8NFQ8 470 aa18.64■□□□□ 0.57
CHMP6-204ENST00000572778 POC1BQ8TC44 478 aa18.64■□□□□ 0.57
CHMP6-204ENST00000572778 WNT2BQ93097 391 aa18.64■□□□□ 0.57
CHMP6-204ENST00000572778 ZG16BQ96DA0 208 aa18.64■□□□□ 0.57
CHMP6-204ENST00000572778 UCN2Q96RP3 112 aa18.64■□□□□ 0.57
CHMP6-204ENST00000572778 PAIP1Q9H074 479 aaKnown RBP18.64■□□□□ 0.57
CHMP6-204ENST00000572778 QRSL1Q9H0R6 528 aaKnown RBP18.64■□□□□ 0.57
CHMP6-204ENST00000572778 RABEP2Q9H5N1 569 aa18.64■□□□□ 0.57
CHMP6-204ENST00000572778 RUBCNLQ9H714 662 aa18.64■□□□□ 0.57
CHMP6-204ENST00000572778 CLCF1Q9UBD9 225 aa18.64■□□□□ 0.57
CHMP6-204ENST00000572778 ZNF629Q9UEG4 869 aaPredicted RBP18.64■□□□□ 0.57
CHMP6-204ENST00000572778 L3MBTL1Q9Y468 752 aa18.64■□□□□ 0.57
CHMP6-204ENST00000572778 PCDHB14Q9Y5E9 798 aa18.64■□□□□ 0.57
CHMP6-204ENST00000572778 PCNX1Q96RV3 2341 aa18.63■□□□□ 0.57
CHMP6-204ENST00000572778 A0A096LPI6 279 aa18.63■□□□□ 0.57
CHMP6-204ENST00000572778 C7orf72A4D263 438 aa18.63■□□□□ 0.57
CHMP6-204ENST00000572778 ATP8B1O43520 1251 aa18.63■□□□□ 0.57
CHMP6-204ENST00000572778 OPN1LWP04000 364 aa18.63■□□□□ 0.57
CHMP6-204ENST00000572778 CHRM4P08173 479 aa18.63■□□□□ 0.57
CHMP6-204ENST00000572778 UBTFL6P0CB48 400 aaPredicted RBP18.63■□□□□ 0.57
CHMP6-204ENST00000572778 TMIGD3P0DMS9 266 aaPredicted RBP18.63■□□□□ 0.57
CHMP6-204ENST00000572778 TROVE2P10155 538 aaKnown RBP eCLIP18.63■□□□□ 0.57
CHMP6-204ENST00000572778 CAPN3P20807 821 aa18.63■□□□□ 0.57
CHMP6-204ENST00000572778 CTSSP25774 331 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms