RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 EXOC3L2Q2M3D2 409 aa16.19■□□□□ 0.18
CHD3-214ENST00000572579 ATP6AP1LQ52LC2 224 aa16.19■□□□□ 0.18
CHD3-214ENST00000572579 STAC2Q6ZMT1 411 aa16.19■□□□□ 0.18
CHD3-214ENST00000572579 LSRQ86X29 649 aaPredicted RBP16.19■□□□□ 0.18
CHD3-214ENST00000572579 OR5AK3PQ8NH89 298 aa16.19■□□□□ 0.18
CHD3-214ENST00000572579 ROBO4Q8WZ75 1007 aa16.19■□□□□ 0.18
CHD3-214ENST00000572579 OSTF1Q92882 214 aa16.19■□□□□ 0.18
CHD3-214ENST00000572579 ARSGQ96EG1 525 aa16.19■□□□□ 0.18
CHD3-214ENST00000572579 PIK3IP1Q96FE7 263 aa16.19■□□□□ 0.18
CHD3-214ENST00000572579 GMPPAQ96IJ6 420 aaPredicted RBP16.19■□□□□ 0.18
CHD3-214ENST00000572579 MED18Q9BUE0 208 aa16.19■□□□□ 0.18
CHD3-214ENST00000572579 TMEM109Q9BVC6 243 aa16.19■□□□□ 0.18
CHD3-214ENST00000572579 ACTRT3Q9BYD9 372 aa16.19■□□□□ 0.18
CHD3-214ENST00000572579 SRXN1Q9BYN0 137 aa16.19■□□□□ 0.18
CHD3-214ENST00000572579 KLHL4Q9C0H6 718 aa16.19■□□□□ 0.18
CHD3-214ENST00000572579 NEUROD4Q9HD90 331 aa16.19■□□□□ 0.18
CHD3-214ENST00000572579 BEX4Q9NWD9 120 aaPredicted RBP16.19■□□□□ 0.18
CHD3-214ENST00000572579 EIF3LQ9Y262 564 aaKnown RBP16.19■□□□□ 0.18
CHD3-214ENST00000572579 DNHD1Q96M86 4753 aa16.19■□□□□ 0.18
CHD3-214ENST00000572579 NAV3Q8IVL0 2385 aa16.19■□□□□ 0.18
CHD3-214ENST00000572579 CENPVL1A0A0U1RR11 272 aa16.18■□□□□ 0.18
CHD3-214ENST00000572579 ESPNB1AK53 854 aa16.18■□□□□ 0.18
CHD3-214ENST00000572579 SCDO00767 359 aa16.18■□□□□ 0.18
CHD3-214ENST00000572579 C1QCP02747 245 aa16.18■□□□□ 0.18
CHD3-214ENST00000572579 FOSL1P15407 271 aa16.18■□□□□ 0.18
CHD3-214ENST00000572579 SERPINB5P36952 375 aa16.18■□□□□ 0.18
CHD3-214ENST00000572579 C21orf58P58505 322 aa16.18■□□□□ 0.18
CHD3-214ENST00000572579 RPS26P62854 115 aaKnown RBP16.18■□□□□ 0.18
CHD3-214ENST00000572579 PHC1P78364 1004 aa16.18■□□□□ 0.18
CHD3-214ENST00000572579 FOXF1Q12946 379 aa16.18■□□□□ 0.18
CHD3-214ENST00000572579 MPP2Q14168 576 aa16.18■□□□□ 0.18
CHD3-214ENST00000572579 KRTAP21-3Q3LHN1 58 aa16.18■□□□□ 0.18
CHD3-214ENST00000572579 CLECL1Q8IZS7 167 aa16.18■□□□□ 0.18
CHD3-214ENST00000572579 LILRA2Q8N149 483 aa16.18■□□□□ 0.18
CHD3-214ENST00000572579 FNDC5Q8NAU1 212 aa16.18■□□□□ 0.18
CHD3-214ENST00000572579 OR5D16Q8NGK9 328 aa16.18■□□□□ 0.18
CHD3-214ENST00000572579 GPR119Q8TDV5 335 aa16.18■□□□□ 0.18
CHD3-214ENST00000572579 CAVIN3Q969G5 261 aa16.18■□□□□ 0.18
CHD3-214ENST00000572579 ZBTB9Q96C00 473 aa16.18■□□□□ 0.18
CHD3-214ENST00000572579 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.18■□□□□ 0.18
CHD3-214ENST00000572579 CARD8Q9Y2G2 431 aa16.18■□□□□ 0.18
CHD3-214ENST00000572579 V9GYY5 206 aaPredicted RBP16.18■□□□□ 0.18
CHD3-214ENST00000572579 NUP214P35658 2090 aaPredicted RBP16.17■□□□□ 0.18
CHD3-214ENST00000572579 WDR91A4D1P6 747 aa16.17■□□□□ 0.18
CHD3-214ENST00000572579 SCN2BO60939 215 aa16.17■□□□□ 0.18
CHD3-214ENST00000572579 MAPK1P28482 360 aa16.17■□□□□ 0.18
CHD3-214ENST00000572579 KCNJ5P48544 419 aa16.17■□□□□ 0.18
CHD3-214ENST00000572579 CLDN8P56748 225 aa16.17■□□□□ 0.18
CHD3-214ENST00000572579 NKX6-1P78426 367 aaPredicted RBP16.17■□□□□ 0.18
CHD3-214ENST00000572579 EMX2Q04743 252 aa16.17■□□□□ 0.18
CHD3-214ENST00000572579 IFFO1Q0D2I5 559 aa16.17■□□□□ 0.18
CHD3-214ENST00000572579 TP53BP2Q13625 1128 aa16.17■□□□□ 0.18
CHD3-214ENST00000572579 FGFBP1Q14512 234 aa16.17■□□□□ 0.18
CHD3-214ENST00000572579 DCST2Q5T1A1 773 aa16.17■□□□□ 0.18
CHD3-214ENST00000572579 HBMQ6B0K9 141 aa16.17■□□□□ 0.18
CHD3-214ENST00000572579 PPP4R4Q6NUP7 873 aa16.17■□□□□ 0.18
CHD3-214ENST00000572579 ESPNLQ6ZVH7 1005 aa16.17■□□□□ 0.18
CHD3-214ENST00000572579 MISPQ8IVT2 679 aa16.17■□□□□ 0.18
CHD3-214ENST00000572579 OR6K3Q8NGY3 331 aa16.17■□□□□ 0.18
CHD3-214ENST00000572579 FBXO27Q8NI29 283 aa16.17■□□□□ 0.18
CHD3-214ENST00000572579 PPP1R14CQ8TAE6 165 aa16.17■□□□□ 0.18
CHD3-214ENST00000572579 PHOSPHO1Q8TCT1 267 aa16.17■□□□□ 0.18
CHD3-214ENST00000572579 IGFBPL1Q8WX77 278 aa16.17■□□□□ 0.18
CHD3-214ENST00000572579 TUBGCP3Q96CW5 907 aa16.17■□□□□ 0.18
CHD3-214ENST00000572579 OR7D2Q96RA2 312 aa16.17■□□□□ 0.18
CHD3-214ENST00000572579 AKTIPQ9H8T0 292 aa16.17■□□□□ 0.18
CHD3-214ENST00000572579 ZNF226Q9NYT6 803 aa16.17■□□□□ 0.18
CHD3-214ENST00000572579 ING1Q9UK53 422 aaPredicted RBP16.17■□□□□ 0.18
CHD3-214ENST00000572579 ZNF195O14628 629 aa16.16■□□□□ 0.18
CHD3-214ENST00000572579 FCMRO60667 390 aa16.16■□□□□ 0.18
CHD3-214ENST00000572579 PLAUP00749 431 aa16.16■□□□□ 0.18
CHD3-214ENST00000572579 FCGR2AP12318 317 aa16.16■□□□□ 0.18
CHD3-214ENST00000572579 HPGDP15428 266 aa16.16■□□□□ 0.18
CHD3-214ENST00000572579 PRPS1L1P21108 318 aa16.16■□□□□ 0.18
CHD3-214ENST00000572579 SFTPDP35247 375 aa16.16■□□□□ 0.18
CHD3-214ENST00000572579 ZNF41P51814 821 aaPredicted RBP16.16■□□□□ 0.18
CHD3-214ENST00000572579 ATP12AP54707 1039 aa16.16■□□□□ 0.18
CHD3-214ENST00000572579 CARD18P57730 90 aa16.16■□□□□ 0.18
CHD3-214ENST00000572579 ZNF844Q08AG5 666 aa16.16■□□□□ 0.18
CHD3-214ENST00000572579 ACKR1Q16570 336 aa16.16■□□□□ 0.18
CHD3-214ENST00000572579 WDR93Q6P2C0 686 aa16.16■□□□□ 0.18
CHD3-214ENST00000572579 Q71RC1 249 aaPredicted RBP16.16■□□□□ 0.18
CHD3-214ENST00000572579 NUFIP2Q7Z417 695 aaKnown RBP16.16■□□□□ 0.18
CHD3-214ENST00000572579 CIARTQ8N365 385 aaPredicted RBP16.16■□□□□ 0.18
CHD3-214ENST00000572579 ZNF781Q8N8C0 355 aa16.16■□□□□ 0.18
CHD3-214ENST00000572579 OR56A1Q8NGH5 318 aa16.16■□□□□ 0.18
CHD3-214ENST00000572579 ADAMTS15Q8TE58 950 aa16.16■□□□□ 0.18
CHD3-214ENST00000572579 ABHD3Q8WU67 409 aa16.16■□□□□ 0.18
CHD3-214ENST00000572579 CHMP6Q96FZ7 201 aa16.16■□□□□ 0.18
CHD3-214ENST00000572579 PPP1R36Q96LQ0 422 aa16.16■□□□□ 0.18
CHD3-214ENST00000572579 KLHL15Q96M94 604 aa16.16■□□□□ 0.18
CHD3-214ENST00000572579 SDF2Q99470 211 aa16.16■□□□□ 0.18
CHD3-214ENST00000572579 SORT1Q99523 831 aa16.16■□□□□ 0.18
CHD3-214ENST00000572579 DUSP26Q9BV47 211 aa16.16■□□□□ 0.18
CHD3-214ENST00000572579 PRRG4Q9BZD6 226 aa16.16■□□□□ 0.18
CHD3-214ENST00000572579 BHLHE41Q9C0J9 482 aaPredicted RBP16.16■□□□□ 0.18
CHD3-214ENST00000572579 COQ10BQ9H8M1 238 aa16.16■□□□□ 0.18
CHD3-214ENST00000572579 BCAS1O75363 584 aaPredicted RBP16.15■□□□□ 0.18
CHD3-214ENST00000572579 HSPA4LO95757 839 aa16.15■□□□□ 0.18
CHD3-214ENST00000572579 DHRS4L1P0CG22 281 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms