RNA–Protein interactions for RNA: ENST00000572253.5

CCDC40-207, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 3,962 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-207ENST00000572253 MOSPD1Q9UJG1 213 aa10.02□□□□□ -0.81
CCDC40-207ENST00000572253 MRPS23Q9Y3D9 190 aaKnown RBP10.02□□□□□ -0.81
CCDC40-207ENST00000572253 IGLON5A6NGN9 336 aa10.01□□□□□ -0.81
CCDC40-207ENST00000572253 PRRT4C9JH25 899 aa10.01□□□□□ -0.81
CCDC40-207ENST00000572253 RAF1P04049 648 aa10.01□□□□□ -0.81
CCDC40-207ENST00000572253 TPOP07202 933 aa10.01□□□□□ -0.81
CCDC40-207ENST00000572253 ASGR2P07307 311 aa10.01□□□□□ -0.81
CCDC40-207ENST00000572253 P2RY2P41231 377 aa10.01□□□□□ -0.81
CCDC40-207ENST00000572253 ACTC1P68032 377 aa10.01□□□□□ -0.81
CCDC40-207ENST00000572253 ACTA1P68133 377 aa10.01□□□□□ -0.81
CCDC40-207ENST00000572253 BTN3A2P78410 334 aa10.01□□□□□ -0.81
CCDC40-207ENST00000572253 TJAP1Q5JTD0 557 aa10.01□□□□□ -0.81
CCDC40-207ENST00000572253 TEX261Q6UWH6 196 aa10.01□□□□□ -0.81
CCDC40-207ENST00000572253 HDDC2Q7Z4H3 204 aa10.01□□□□□ -0.81
CCDC40-207ENST00000572253 REM2Q8IYK8 340 aaPredicted RBP10.01□□□□□ -0.81
CCDC40-207ENST00000572253 ZNF680Q8NEM1 530 aa10.01□□□□□ -0.81
CCDC40-207ENST00000572253 CDS1Q92903 461 aa10.01□□□□□ -0.81
CCDC40-207ENST00000572253 MARVELD3Q96A59 401 aa10.01□□□□□ -0.81
CCDC40-207ENST00000572253 TOX2Q96NM4 488 aa10.01□□□□□ -0.81
CCDC40-207ENST00000572253 HDAC8Q9BY41 377 aa10.01□□□□□ -0.81
CCDC40-207ENST00000572253 CREBZFQ9NS37 354 aa10.01□□□□□ -0.81
CCDC40-207ENST00000572253 ELF5Q9UKW6 265 aaPredicted RBP10.01□□□□□ -0.81
CCDC40-207ENST00000572253 CLEC4AQ9UMR7 237 aa10.01□□□□□ -0.81
CCDC40-207ENST00000572253 SIRT4Q9Y6E7 314 aaPredicted RBP10.01□□□□□ -0.81
CCDC40-207ENST00000572253 U3KQ87 197 aa10.01□□□□□ -0.81
CCDC40-207ENST00000572253 LINC00862A6NCI5 91 aa10.01□□□□□ -0.81
CCDC40-207ENST00000572253 DVL2O14641 736 aa10.01□□□□□ -0.81
CCDC40-207ENST00000572253 PLPP2O43688 288 aa10.01□□□□□ -0.81
CCDC40-207ENST00000572253 ARL6IP5O75915 188 aa10.01□□□□□ -0.81
CCDC40-207ENST00000572253 C4BPBP20851 252 aa10.01□□□□□ -0.81
CCDC40-207ENST00000572253 GIFP27352 417 aa10.01□□□□□ -0.81
CCDC40-207ENST00000572253 RGS1Q08116 209 aa10.01□□□□□ -0.81
CCDC40-207ENST00000572253 LTB4RQ15722 352 aa10.01□□□□□ -0.81
CCDC40-207ENST00000572253 GPR68Q15743 365 aa10.01□□□□□ -0.81
CCDC40-207ENST00000572253 CCNJQ5T5M9 372 aa10.01□□□□□ -0.81
CCDC40-207ENST00000572253 SLC22A10Q63ZE4 541 aa10.01□□□□□ -0.81
CCDC40-207ENST00000572253 SDE2Q6IQ49 451 aa10.01□□□□□ -0.81
CCDC40-207ENST00000572253 MFSD12Q6NUT3 480 aa10.01□□□□□ -0.81
CCDC40-207ENST00000572253 ZNF836Q6ZNA1 936 aa10.01□□□□□ -0.81
CCDC40-207ENST00000572253 FRRS1Q6ZNA5 592 aa10.01□□□□□ -0.81
CCDC40-207ENST00000572253 RTL10Q7L3V2 364 aa10.01□□□□□ -0.81
CCDC40-207ENST00000572253 FAM20CQ8IXL6 584 aa10.01□□□□□ -0.81
CCDC40-207ENST00000572253 LRRC25Q8N386 305 aaPredicted RBP10.01□□□□□ -0.81
CCDC40-207ENST00000572253 OR4C6Q8NH72 309 aa10.01□□□□□ -0.81
CCDC40-207ENST00000572253 ZNF671Q8TAW3 534 aa10.01□□□□□ -0.81
CCDC40-207ENST00000572253 TMEM239Q8WW34 195 aa10.01□□□□□ -0.81
CCDC40-207ENST00000572253 AICDAQ9GZX7 198 aa10.01□□□□□ -0.81
CCDC40-207ENST00000572253 ABRACLQ9P1F3 81 aa10.01□□□□□ -0.81
CCDC40-207ENST00000572253 CES1P1Q9UKY3 287 aa10.01□□□□□ -0.81
CCDC40-207ENST00000572253 HCFC2Q9Y5Z7 792 aa10.01□□□□□ -0.81
CCDC40-207ENST00000572253 NUP210Q8TEM1 1887 aaPredicted RBP10.01□□□□□ -0.81
CCDC40-207ENST00000572253 HEATR5BQ9P2D3 2071 aa10.01□□□□□ -0.81
CCDC40-207ENST00000572253 IGKV1-8A0A0C4DH67 115 aa10.01□□□□□ -0.81
CCDC40-207ENST00000572253 SYNDIG1LA6NDD5 238 aa10.01□□□□□ -0.81
CCDC40-207ENST00000572253 B8ZZF3 427 aa10.01□□□□□ -0.81
CCDC40-207ENST00000572253 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.01□□□□□ -0.81
CCDC40-207ENST00000572253 J3QRE1 110 aa10.01□□□□□ -0.81
CCDC40-207ENST00000572253 CDC42EP2O14613 210 aa10.01□□□□□ -0.81
CCDC40-207ENST00000572253 MRPL3P09001 348 aaKnown RBP10.01□□□□□ -0.81
CCDC40-207ENST00000572253 SAGP10523 405 aaPredicted RBP10.01□□□□□ -0.81
CCDC40-207ENST00000572253 NOS3P29474 1203 aa10.01□□□□□ -0.81
CCDC40-207ENST00000572253 OR10A3P58181 314 aa10.01□□□□□ -0.81
CCDC40-207ENST00000572253 ZNF234Q14588 700 aa10.01□□□□□ -0.81
CCDC40-207ENST00000572253 ACSM3Q53FZ2 586 aa10.01□□□□□ -0.81
CCDC40-207ENST00000572253 NR2C2APQ86WQ0 139 aa10.01□□□□□ -0.81
CCDC40-207ENST00000572253 LNX2Q8N448 690 aa10.01□□□□□ -0.81
CCDC40-207ENST00000572253 ABHD1Q96SE0 405 aa10.01□□□□□ -0.81
CCDC40-207ENST00000572253 LGR4Q9BXB1 951 aa10.01□□□□□ -0.81
CCDC40-207ENST00000572253 AKAP7Q9P0M2 348 aaPredicted RBP10.01□□□□□ -0.81
CCDC40-207ENST00000572253 CHST2Q9Y4C5 530 aa10.01□□□□□ -0.81
CCDC40-207ENST00000572253 LOC105369274A0A096LPK9 316 aa10□□□□□ -0.81
CCDC40-207ENST00000572253 ZC3H12DA2A288 527 aaKnown RBP10□□□□□ -0.81
CCDC40-207ENST00000572253 SHOXO15266 292 aa10□□□□□ -0.81
CCDC40-207ENST00000572253 FLRT2O43155 660 aa10□□□□□ -0.81
CCDC40-207ENST00000572253 IFNGP01579 166 aa10□□□□□ -0.81
CCDC40-207ENST00000572253 CD3GP09693 182 aa10□□□□□ -0.81
CCDC40-207ENST00000572253 ZNF3P17036 446 aa10□□□□□ -0.81
CCDC40-207ENST00000572253 DNASE1P24855 282 aa10□□□□□ -0.81
CCDC40-207ENST00000572253 BMP8BP34820 402 aa10□□□□□ -0.81
CCDC40-207ENST00000572253 ACVR1BP36896 505 aa10□□□□□ -0.81
CCDC40-207ENST00000572253 SRP9P49458 86 aaKnown RBP10□□□□□ -0.81
CCDC40-207ENST00000572253 PRMT2P55345 433 aa10□□□□□ -0.81
CCDC40-207ENST00000572253 RAG2P55895 527 aa10□□□□□ -0.81
CCDC40-207ENST00000572253 NRG3P56975 720 aa10□□□□□ -0.81
CCDC40-207ENST00000572253 BMP8AQ7Z5Y6 402 aa10□□□□□ -0.81
CCDC40-207ENST00000572253 GRASPQ7Z6J2 395 aaPredicted RBP10□□□□□ -0.81
CCDC40-207ENST00000572253 FGD2Q7Z6J4 655 aa10□□□□□ -0.81
CCDC40-207ENST00000572253 CDH24Q86UP0 819 aa10□□□□□ -0.81
CCDC40-207ENST00000572253 SIAH3Q8IW03 269 aa10□□□□□ -0.81
CCDC40-207ENST00000572253 SLITRK4Q8IW52 837 aa10□□□□□ -0.81
CCDC40-207ENST00000572253 OR4N4Q8N0Y3 316 aa10□□□□□ -0.81
CCDC40-207ENST00000572253 MFSD9Q8NBP5 474 aa10□□□□□ -0.81
CCDC40-207ENST00000572253 SLC16A11Q8NCK7 471 aa10□□□□□ -0.81
CCDC40-207ENST00000572253 RPLP0P6Q8NHW5 317 aa10□□□□□ -0.81
CCDC40-207ENST00000572253 C4orf36Q96KX1 117 aa10□□□□□ -0.81
CCDC40-207ENST00000572253 CMC2Q9NRP2 79 aa10□□□□□ -0.81
CCDC40-207ENST00000572253 NUP50Q9UKX7 468 aa10□□□□□ -0.81
CCDC40-207ENST00000572253 KCNK6Q9Y257 313 aa10□□□□□ -0.81
CCDC40-207ENST00000572253 MED31Q9Y3C7 131 aa10□□□□□ -0.81
CCDC40-207ENST00000572253 PYCR1P32322 319 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms