RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 ZNF19P17023 458 aa16.24■□□□□ 0.19
SCARF1-205ENST00000571272 TEAD1P28347 426 aa16.24■□□□□ 0.19
SCARF1-205ENST00000571272 CCR6P51684 374 aa16.24■□□□□ 0.19
SCARF1-205ENST00000571272 NOGQ13253 232 aa16.24■□□□□ 0.19
SCARF1-205ENST00000571272 ANGPT1Q15389 498 aa16.24■□□□□ 0.19
SCARF1-205ENST00000571272 GPR68Q15743 365 aa16.24■□□□□ 0.19
SCARF1-205ENST00000571272 SLC36A2Q495M3 483 aa16.24■□□□□ 0.19
SCARF1-205ENST00000571272 ESPNLQ6ZVH7 1005 aa16.24■□□□□ 0.19
SCARF1-205ENST00000571272 GID4Q8IVV7 300 aa16.24■□□□□ 0.19
SCARF1-205ENST00000571272 TTLQ8NG68 377 aa16.24■□□□□ 0.19
SCARF1-205ENST00000571272 OR2L5Q8NG80 312 aa16.24■□□□□ 0.19
SCARF1-205ENST00000571272 FANK1Q8TC84 345 aa16.24■□□□□ 0.19
SCARF1-205ENST00000571272 SCMH1Q96GD3 660 aa16.24■□□□□ 0.19
SCARF1-205ENST00000571272 MS4A3Q96HJ5 214 aa16.24■□□□□ 0.19
SCARF1-205ENST00000571272 SYNDIG1Q9H7V2 258 aa16.24■□□□□ 0.19
SCARF1-205ENST00000571272 APOBEC3BQ9UH17 382 aaKnown RBP16.24■□□□□ 0.19
SCARF1-205ENST00000571272 SLC9A3R1O14745 358 aaPredicted RBP16.24■□□□□ 0.19
SCARF1-205ENST00000571272 SLC22A5O76082 557 aa16.24■□□□□ 0.19
SCARF1-205ENST00000571272 SOX30O94993 753 aa16.24■□□□□ 0.19
SCARF1-205ENST00000571272 OR5F1O95221 314 aa16.24■□□□□ 0.19
SCARF1-205ENST00000571272 TCRBP04435 133 aa16.24■□□□□ 0.19
SCARF1-205ENST00000571272 MAKP20794 623 aa16.24■□□□□ 0.19
SCARF1-205ENST00000571272 GALP22466 123 aa16.24■□□□□ 0.19
SCARF1-205ENST00000571272 F8A1P23610 371 aa16.24■□□□□ 0.19
SCARF1-205ENST00000571272 TOR2AQ5JU69 321 aa16.24■□□□□ 0.19
SCARF1-205ENST00000571272 WDR45BQ5MNZ6 344 aa16.24■□□□□ 0.19
SCARF1-205ENST00000571272 PRPF38BQ5VTL8 546 aaKnown RBP16.24■□□□□ 0.19
SCARF1-205ENST00000571272 TEX261Q6UWH6 196 aa16.24■□□□□ 0.19
SCARF1-205ENST00000571272 WDR88Q6ZMY6 472 aa16.24■□□□□ 0.19
SCARF1-205ENST00000571272 ZNF836Q6ZNA1 936 aa16.24■□□□□ 0.19
SCARF1-205ENST00000571272 OR4N5Q8IXE1 308 aa16.24■□□□□ 0.19
SCARF1-205ENST00000571272 ZNF680Q8NEM1 530 aa16.24■□□□□ 0.19
SCARF1-205ENST00000571272 OR7G2Q8NG99 324 aa16.24■□□□□ 0.19
SCARF1-205ENST00000571272 ABHD4Q8TB40 342 aa16.24■□□□□ 0.19
SCARF1-205ENST00000571272 RSPRY1Q96DX4 576 aa16.24■□□□□ 0.19
SCARF1-205ENST00000571272 ZNF681Q96N22 645 aa16.24■□□□□ 0.19
SCARF1-205ENST00000571272 OR51J1Q9H342 316 aa16.24■□□□□ 0.19
SCARF1-205ENST00000571272 DPAGT1Q9H3H5 408 aa16.24■□□□□ 0.19
SCARF1-205ENST00000571272 WDR45Q9Y484 360 aa16.24■□□□□ 0.19
SCARF1-205ENST00000571272 U3KQ87 197 aa16.24■□□□□ 0.19
SCARF1-205ENST00000571272 UNC119BA6NIH7 251 aa16.24■□□□□ 0.19
SCARF1-205ENST00000571272 HYAL3O43820 417 aaPredicted RBP16.24■□□□□ 0.19
SCARF1-205ENST00000571272 BTN3A2P78410 334 aa16.24■□□□□ 0.19
SCARF1-205ENST00000571272 BDH1Q02338 343 aa16.24■□□□□ 0.19
SCARF1-205ENST00000571272 TCEA2Q15560 299 aa16.24■□□□□ 0.19
SCARF1-205ENST00000571272 TOMM5Q8N4H5 51 aa16.24■□□□□ 0.19
SCARF1-205ENST00000571272 CYB561A3Q8NBI2 242 aa16.24■□□□□ 0.19
SCARF1-205ENST00000571272 PTP4A1Q93096 173 aa16.24■□□□□ 0.19
SCARF1-205ENST00000571272 C4orf36Q96KX1 117 aa16.24■□□□□ 0.19
SCARF1-205ENST00000571272 GPR137Q96N19 417 aa16.24■□□□□ 0.19
SCARF1-205ENST00000571272 C1QTNF2Q9BXJ5 285 aa16.24■□□□□ 0.19
SCARF1-205ENST00000571272 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.24■□□□□ 0.191e-6■■□□□ 11.9
SCARF1-205ENST00000571272 NARFLQ9H6Q4 476 aa16.24■□□□□ 0.19
SCARF1-205ENST00000571272 SIDT1Q9NXL6 827 aaKnown RBP16.24■□□□□ 0.19
SCARF1-205ENST00000571272 MOSPD1Q9UJG1 213 aa16.24■□□□□ 0.19
SCARF1-205ENST00000571272 SCO1O75880 301 aa16.23■□□□□ 0.19
SCARF1-205ENST00000571272 BMP7P18075 431 aa16.23■□□□□ 0.19
SCARF1-205ENST00000571272 NOS3P29474 1203 aa16.23■□□□□ 0.19
SCARF1-205ENST00000571272 OR12D2P58182 307 aa16.23■□□□□ 0.19
SCARF1-205ENST00000571272 SNRPNP63162 240 aaKnown RBP16.23■□□□□ 0.19
SCARF1-205ENST00000571272 GALEQ14376 348 aa16.23■□□□□ 0.19
SCARF1-205ENST00000571272 SIAH3Q8IW03 269 aa16.23■□□□□ 0.19
SCARF1-205ENST00000571272 OR52L1Q8NGH7 329 aa16.23■□□□□ 0.19
SCARF1-205ENST00000571272 SPHK1Q9NYA1 384 aa16.23■□□□□ 0.19
SCARF1-205ENST00000571272 FBXL4Q9UKA2 621 aa16.23■□□□□ 0.19
SCARF1-205ENST00000571272 A0A0G2JK05 382 aa16.23■□□□□ 0.19
SCARF1-205ENST00000571272 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.23■□□□□ 0.19
SCARF1-205ENST00000571272 C7orf66A4D0T2 115 aa16.23■□□□□ 0.19
SCARF1-205ENST00000571272 NARSO43776 548 aaKnown RBP16.23■□□□□ 0.19
SCARF1-205ENST00000571272 NFATC1O95644 943 aa16.23■□□□□ 0.19
SCARF1-205ENST00000571272 GYPBP06028 91 aa16.23■□□□□ 0.19
SCARF1-205ENST00000571272 ANXA3P12429 323 aa16.23■□□□□ 0.19
SCARF1-205ENST00000571272 ITGB8P26012 769 aa16.23■□□□□ 0.19
SCARF1-205ENST00000571272 SSTR2P30874 369 aa16.23■□□□□ 0.19
SCARF1-205ENST00000571272 VASPP50552 380 aaPredicted RBP16.23■□□□□ 0.19
SCARF1-205ENST00000571272 DGCR2P98153 550 aa16.23■□□□□ 0.19
SCARF1-205ENST00000571272 PYHIN1Q6K0P9 492 aa16.23■□□□□ 0.19
SCARF1-205ENST00000571272 THSD4Q6ZMP0 1018 aa16.23■□□□□ 0.19
SCARF1-205ENST00000571272 ZNF782Q6ZMW2 699 aaPredicted RBP16.23■□□□□ 0.19
SCARF1-205ENST00000571272 KCT2Q8NC54 265 aa16.23■□□□□ 0.19
SCARF1-205ENST00000571272 OR4D9Q8NGE8 314 aa16.23■□□□□ 0.19
SCARF1-205ENST00000571272 KISS1RQ969F8 398 aaPredicted RBP16.23■□□□□ 0.19
SCARF1-205ENST00000571272 AHCYL2Q96HN2 611 aaKnown RBP16.23■□□□□ 0.19
SCARF1-205ENST00000571272 CD180Q99467 661 aa16.23■□□□□ 0.19
SCARF1-205ENST00000571272 NDC1Q9BTX1 674 aa16.23■□□□□ 0.19
SCARF1-205ENST00000571272 JAM3Q9BX67 310 aa16.23■□□□□ 0.19
SCARF1-205ENST00000571272 ELF5Q9UKW6 265 aaPredicted RBP16.23■□□□□ 0.19
SCARF1-205ENST00000571272 ZMIZ1Q9ULJ6 1067 aa16.23■□□□□ 0.19
SCARF1-205ENST00000571272 MAGEB4O15481 346 aaPredicted RBP16.22■□□□□ 0.19
SCARF1-205ENST00000571272 ADH1CP00326 375 aa16.22■□□□□ 0.19
SCARF1-205ENST00000571272 MT-ND5P03915 603 aa16.22■□□□□ 0.19
SCARF1-205ENST00000571272 ASGR2P07307 311 aa16.22■□□□□ 0.19
SCARF1-205ENST00000571272 EPCAMP16422 314 aa16.22■□□□□ 0.19
SCARF1-205ENST00000571272 ERVK-21P61565 698 aa16.22■□□□□ 0.19
SCARF1-205ENST00000571272 KCTD12Q96CX2 325 aaKnown RBP16.22■□□□□ 0.19
SCARF1-205ENST00000571272 PRSS27Q9BQR3 290 aa16.22■□□□□ 0.19
SCARF1-205ENST00000571272 IFT27Q9BW83 186 aa16.22■□□□□ 0.19
SCARF1-205ENST00000571272 CACNG6Q9BXT2 260 aa16.22■□□□□ 0.19
SCARF1-205ENST00000571272 RANBP3Q9H6Z4 567 aaPredicted RBP16.22■□□□□ 0.19
SCARF1-205ENST00000571272 DIABLOQ9NR28 239 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms