RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 STX18Q9P2W9 335 aaKnown RBP14.11□□□□□ -0.15
HERPUD1-219ENST00000570273 NKX1-2Q9UD57 310 aaPredicted RBP14.11□□□□□ -0.15
HERPUD1-219ENST00000570273 CARD8Q9Y2G2 431 aa14.11□□□□□ -0.15
HERPUD1-219ENST00000570273 MAP1BP46821 2468 aaKnown RBP14.11□□□□□ -0.15
HERPUD1-219ENST00000570273 USP24Q9UPU5 2620 aa14.1□□□□□ -0.15
HERPUD1-219ENST00000570273 TMEM8BA6NDV4 472 aa14.1□□□□□ -0.15
HERPUD1-219ENST00000570273 C17orf51A8MQB3 221 aa14.1□□□□□ -0.15
HERPUD1-219ENST00000570273 J3KTA2 159 aa14.1□□□□□ -0.15
HERPUD1-219ENST00000570273 ZNF264O43296 627 aa14.1□□□□□ -0.15
HERPUD1-219ENST00000570273 HCRTR2O43614 444 aa14.1□□□□□ -0.15
HERPUD1-219ENST00000570273 PRG2P13727 222 aa14.1□□□□□ -0.15
HERPUD1-219ENST00000570273 ZNF136P52737 540 aa14.1□□□□□ -0.15
HERPUD1-219ENST00000570273 UCNP55089 124 aa14.1□□□□□ -0.15
HERPUD1-219ENST00000570273 SPIBQ01892 262 aa14.1□□□□□ -0.15
HERPUD1-219ENST00000570273 ZNF117Q03924 483 aa14.1□□□□□ -0.15
HERPUD1-219ENST00000570273 SKP2Q13309 424 aa14.1□□□□□ -0.15
HERPUD1-219ENST00000570273 TUBA3CQ13748 450 aa14.1□□□□□ -0.15
HERPUD1-219ENST00000570273 IQCCQ4KMZ1 466 aa14.1□□□□□ -0.15
HERPUD1-219ENST00000570273 TUBA3EQ6PEY2 450 aa14.1□□□□□ -0.15
HERPUD1-219ENST00000570273 PLEKHM3Q6ZWE6 761 aa14.1□□□□□ -0.15
HERPUD1-219ENST00000570273 TSEN54Q7Z6J9 526 aaKnown RBP14.1□□□□□ -0.15
HERPUD1-219ENST00000570273 AMIGO2Q86SJ2 522 aa14.1□□□□□ -0.15
HERPUD1-219ENST00000570273 SLC35B4Q969S0 331 aa14.1□□□□□ -0.15
HERPUD1-219ENST00000570273 ARSGQ96EG1 525 aa14.1□□□□□ -0.15
HERPUD1-219ENST00000570273 ZNF347Q96SE7 839 aa14.1□□□□□ -0.15
HERPUD1-219ENST00000570273 MCHR1Q99705 422 aa14.1□□□□□ -0.15
HERPUD1-219ENST00000570273 PIP5K1AQ99755 562 aa14.1□□□□□ -0.15
HERPUD1-219ENST00000570273 LAT2Q9GZY6 243 aa14.1□□□□□ -0.15
HERPUD1-219ENST00000570273 ZNF552Q9H707 407 aaPredicted RBP14.1□□□□□ -0.15
HERPUD1-219ENST00000570273 CPNE5Q9HCH3 593 aa14.1□□□□□ -0.15
HERPUD1-219ENST00000570273 SH2D2AQ9NP31 389 aa14.1□□□□□ -0.15
HERPUD1-219ENST00000570273 EXOSC3Q9NQT5 275 aaKnown RBP14.1□□□□□ -0.15
HERPUD1-219ENST00000570273 CTPS2Q9NRF8 586 aa14.1□□□□□ -0.15
HERPUD1-219ENST00000570273 AGPAT4Q9NRZ5 378 aa14.1□□□□□ -0.15
HERPUD1-219ENST00000570273 PLA2G3Q9NZ20 509 aa14.1□□□□□ -0.15
HERPUD1-219ENST00000570273 C6orf203Q9P0P8 240 aaPredicted RBP14.1□□□□□ -0.15
HERPUD1-219ENST00000570273 PPP4R1LQ9P1A2 415 aa14.1□□□□□ -0.15
HERPUD1-219ENST00000570273 TESQ9UGI8 421 aaKnown RBP14.1□□□□□ -0.15
HERPUD1-219ENST00000570273 RIMS3Q9UJD0 308 aa14.1□□□□□ -0.15
HERPUD1-219ENST00000570273 CNOT11Q9UKZ1 510 aaKnown RBP14.1□□□□□ -0.15
HERPUD1-219ENST00000570273 WIF1Q9Y5W5 379 aa14.1□□□□□ -0.15
HERPUD1-219ENST00000570273 EXPH5Q8NEV8 1989 aa14.1□□□□□ -0.15
HERPUD1-219ENST00000570273 C2orf72A6NCS6 295 aa14.09□□□□□ -0.15
HERPUD1-219ENST00000570273 GNGT2O14610 69 aa14.09□□□□□ -0.15
HERPUD1-219ENST00000570273 ADAM10O14672 748 aa14.09□□□□□ -0.15
HERPUD1-219ENST00000570273 CLOCKO15516 846 aa14.09□□□□□ -0.15
HERPUD1-219ENST00000570273 GMFGO60234 142 aa14.09□□□□□ -0.15
HERPUD1-219ENST00000570273 EIF4E2O60573 245 aaKnown RBP14.09□□□□□ -0.15
HERPUD1-219ENST00000570273 WDPCPO95876 746 aa14.09□□□□□ -0.15
HERPUD1-219ENST00000570273 P04436 131 aa14.09□□□□□ -0.15
HERPUD1-219ENST00000570273 RHCEP18577 417 aa14.09□□□□□ -0.15
HERPUD1-219ENST00000570273 ITPKBP27987 946 aa14.09□□□□□ -0.15
HERPUD1-219ENST00000570273 RYKP34925 604 aa14.09□□□□□ -0.15
HERPUD1-219ENST00000570273 PTGDSP41222 190 aa14.09□□□□□ -0.15
HERPUD1-219ENST00000570273 CASP3P42574 277 aa14.09□□□□□ -0.15
HERPUD1-219ENST00000570273 TMPRSS3P57727 454 aa14.09□□□□□ -0.15
HERPUD1-219ENST00000570273 SLC22A10Q63ZE4 541 aa14.09□□□□□ -0.15
HERPUD1-219ENST00000570273 OR2T5Q6IEZ7 315 aa14.09□□□□□ -0.15
HERPUD1-219ENST00000570273 HMBOX1Q6NT76 420 aa14.09□□□□□ -0.15
HERPUD1-219ENST00000570273 SLC30A6Q6NXT4 461 aa14.09□□□□□ -0.15
HERPUD1-219ENST00000570273 TMEM81Q6P7N7 255 aa14.09□□□□□ -0.15
HERPUD1-219ENST00000570273 FDCSPQ8NFU4 85 aa14.09□□□□□ -0.15
HERPUD1-219ENST00000570273 OR2T29Q8NH02 315 aa14.09□□□□□ -0.15
HERPUD1-219ENST00000570273 PRRC1Q96M27 445 aa14.09□□□□□ -0.15
HERPUD1-219ENST00000570273 CNTNAP3BQ96NU0 1288 aa14.09□□□□□ -0.15
HERPUD1-219ENST00000570273 ZNF559Q9BR84 538 aa14.09□□□□□ -0.15
HERPUD1-219ENST00000570273 CNTNAP3Q9BZ76 1288 aa14.09□□□□□ -0.15
HERPUD1-219ENST00000570273 SEMA6AQ9H2E6 1030 aa14.09□□□□□ -0.15
HERPUD1-219ENST00000570273 TIMMDC1Q9NPL8 285 aa14.09□□□□□ -0.15
HERPUD1-219ENST00000570273 SDHAF3Q9NRP4 125 aa14.09□□□□□ -0.15
HERPUD1-219ENST00000570273 SACM1LQ9NTJ5 587 aa14.09□□□□□ -0.15
HERPUD1-219ENST00000570273 CNIH4Q9P003 139 aa14.09□□□□□ -0.15
HERPUD1-219ENST00000570273 LRFN1Q9P244 771 aa14.09□□□□□ -0.15
HERPUD1-219ENST00000570273 DNAJB9Q9UBS3 223 aa14.09□□□□□ -0.15
HERPUD1-219ENST00000570273 NTNG1Q9Y2I2 539 aa14.09□□□□□ -0.15
HERPUD1-219ENST00000570273 TESMINQ9Y4I5 508 aa14.09□□□□□ -0.15
HERPUD1-219ENST00000570273 ANKRD11Q6UB99 2663 aaPredicted RBP14.09□□□□□ -0.15
HERPUD1-219ENST00000570273 ACACAQ13085 2346 aa14.09□□□□□ -0.15
HERPUD1-219ENST00000570273 CPSF4LA6NMK7 179 aaKnown RBP14.08□□□□□ -0.15
HERPUD1-219ENST00000570273 K7ENP7 123 aa14.08□□□□□ -0.15
HERPUD1-219ENST00000570273 FMO6PO60774 539 aa14.08□□□□□ -0.15
HERPUD1-219ENST00000570273 UQCRBP14927 111 aa14.08□□□□□ -0.15
HERPUD1-219ENST00000570273 HTR2AP28223 471 aa14.08□□□□□ -0.15
HERPUD1-219ENST00000570273 CD96P40200 585 aa14.08□□□□□ -0.15
HERPUD1-219ENST00000570273 GAS1P54826 345 aa14.08□□□□□ -0.15
HERPUD1-219ENST00000570273 TAS2R41P59536 307 aa14.08□□□□□ -0.15
HERPUD1-219ENST00000570273 SLC34A1Q06495 639 aa14.08□□□□□ -0.15
HERPUD1-219ENST00000570273 EPS8Q12929 822 aa14.08□□□□□ -0.15
HERPUD1-219ENST00000570273 SNTA1Q13424 505 aa14.08□□□□□ -0.15
HERPUD1-219ENST00000570273 GANABQ14697 944 aaKnown RBP14.08□□□□□ -0.15
HERPUD1-219ENST00000570273 OR1C1Q15619 314 aa14.08□□□□□ -0.15
HERPUD1-219ENST00000570273 INO80CQ6PI98 192 aaPredicted RBP14.08□□□□□ -0.15
HERPUD1-219ENST00000570273 CBLN3Q6UW01 205 aa14.08□□□□□ -0.15
HERPUD1-219ENST00000570273 MDGA2Q7Z553 956 aa14.08□□□□□ -0.15
HERPUD1-219ENST00000570273 PSD4Q8NDX1 1056 aa14.08□□□□□ -0.15
HERPUD1-219ENST00000570273 DUSP19Q8WTR2 217 aa14.08□□□□□ -0.15
HERPUD1-219ENST00000570273 PHF10Q8WUB8 498 aaKnown RBP14.08□□□□□ -0.15
HERPUD1-219ENST00000570273 CENPNQ96H22 339 aaPredicted RBP14.08□□□□□ -0.15
HERPUD1-219ENST00000570273 BDH2Q9BUT1 245 aa14.08□□□□□ -0.15
HERPUD1-219ENST00000570273 PRR14Q9BWN1 585 aa14.08□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms