RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, human

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HERPUD1-215	ENST00000568676	KCNA7	Q96RP8	456 aa		14	□□□□□ -0.17
HERPUD1-215	ENST00000568676	FMO2	Q99518	471 aa		14	□□□□□ -0.17
HERPUD1-215	ENST00000568676	TMEM185B	Q9H7F4	350 aa		14	□□□□□ -0.17
HERPUD1-215	ENST00000568676	TMEM160	Q9NX00	188 aa		14	□□□□□ -0.17
HERPUD1-215	ENST00000568676	POLR3H	Q9Y535	204 aa	Predicted RBP	14	□□□□□ -0.17
HERPUD1-215	ENST00000568676	PCNX3	Q9H6A9	2034 aa		14	□□□□□ -0.17
HERPUD1-215	ENST00000568676	TBX19	O60806	448 aa		13.99	□□□□□ -0.17
HERPUD1-215	ENST00000568676	ADAM11	O75078	769 aa		13.99	□□□□□ -0.17
HERPUD1-215	ENST00000568676	KCNK2	O95069	426 aa		13.99	□□□□□ -0.17
HERPUD1-215	ENST00000568676	GSTA1	P08263	222 aa		13.99	□□□□□ -0.17
HERPUD1-215	ENST00000568676	SUMO3	P55854	103 aa	Predicted RBP	13.99	□□□□□ -0.17
HERPUD1-215	ENST00000568676	ETF1	P62495	437 aa	Known RBP	13.99	□□□□□ -0.17
HERPUD1-215	ENST00000568676	HSPB3	Q12988	150 aa		13.99	□□□□□ -0.17
HERPUD1-215	ENST00000568676	AGAP6	Q5VW22	663 aa		13.99	□□□□□ -0.17
HERPUD1-215	ENST00000568676	FAM219B	Q5XKK7	198 aa		13.99	□□□□□ -0.17
HERPUD1-215	ENST00000568676	FCRLA	Q7L513	359 aa		13.99	□□□□□ -0.17
HERPUD1-215	ENST00000568676	P2RY8	Q86VZ1	359 aa		13.99	□□□□□ -0.17
HERPUD1-215	ENST00000568676	HOMEZ	Q8IX15	550 aa		13.99	□□□□□ -0.17
HERPUD1-215	ENST00000568676	TUSC5	Q8IXB3	177 aa		13.99	□□□□□ -0.17
HERPUD1-215	ENST00000568676	NUP43	Q8NFH3	380 aa		13.99	□□□□□ -0.17
HERPUD1-215	ENST00000568676	KBTBD8	Q8NFY9	601 aa		13.99	□□□□□ -0.17
HERPUD1-215	ENST00000568676	POC1B	Q8TC44	478 aa		13.99	□□□□□ -0.17
HERPUD1-215	ENST00000568676	ACMSD	Q8TDX5	336 aa		13.99	□□□□□ -0.17
HERPUD1-215	ENST00000568676	MUCL1	Q96DR8	90 aa		13.99	□□□□□ -0.17
HERPUD1-215	ENST00000568676	ADAD1	Q96M93	576 aa	Known RBP	13.99	□□□□□ -0.17
HERPUD1-215	ENST00000568676	GSTO2	Q9H4Y5	243 aa		13.99	□□□□□ -0.17
HERPUD1-215	ENST00000568676	MID1IP1	Q9NPA3	183 aa		13.99	□□□□□ -0.17
HERPUD1-215	ENST00000568676	CISD1	Q9NZ45	108 aa	Known RBP	13.99	□□□□□ -0.17
HERPUD1-215	ENST00000568676	KLHL9	Q9P2J3	617 aa		13.99	□□□□□ -0.17
HERPUD1-215	ENST00000568676	PYCARD	Q9ULZ3	195 aa		13.99	□□□□□ -0.17
HERPUD1-215	ENST00000568676	ACTL7B	Q9Y614	415 aa		13.99	□□□□□ -0.17
HERPUD1-215	ENST00000568676	GPC6	Q9Y625	555 aa	Predicted RBP	13.99	□□□□□ -0.17
HERPUD1-215	ENST00000568676	ABCA1	O95477	2261 aa		13.98	□□□□□ -0.17
HERPUD1-215	ENST00000568676	EXOC1L	A0A1B0GW35	172 aa		13.98	□□□□□ -0.17
HERPUD1-215	ENST00000568676	NPIPB8	E9PQR5	432 aa		13.98	□□□□□ -0.17
HERPUD1-215	ENST00000568676	ADA	P00813	363 aa		13.98	□□□□□ -0.17
HERPUD1-215	ENST00000568676	OPN1LW	P04000	364 aa		13.98	□□□□□ -0.17
HERPUD1-215	ENST00000568676	DDX5	P17844	614 aa	Known RBP	13.98	□□□□□ -0.17
HERPUD1-215	ENST00000568676	PRPH2	P23942	346 aa		13.98	□□□□□ -0.17
HERPUD1-215	ENST00000568676	SFTPD	P35247	375 aa		13.98	□□□□□ -0.17
HERPUD1-215	ENST00000568676	FAP	Q12884	760 aa		13.98	□□□□□ -0.17
HERPUD1-215	ENST00000568676	BHLHA15	Q7RTS1	189 aa	Predicted RBP	13.98	□□□□□ -0.17
HERPUD1-215	ENST00000568676	ZC3HAV1	Q7Z2W4	902 aa	Known RBP	13.98	□□□□□ -0.17
HERPUD1-215	ENST00000568676	ZNF551	Q7Z340	670 aa	Predicted RBP	13.98	□□□□□ -0.17
HERPUD1-215	ENST00000568676	NUFIP2	Q7Z417	695 aa	Known RBP	13.98	□□□□□ -0.17
HERPUD1-215	ENST00000568676	COX18	Q8N8Q8	333 aa		13.98	□□□□□ -0.17
HERPUD1-215	ENST00000568676	GATS	Q8NAP1	163 aa		13.98	□□□□□ -0.17
HERPUD1-215	ENST00000568676	ZNF527	Q8NB42	609 aa		13.98	□□□□□ -0.17
HERPUD1-215	ENST00000568676	SH3YL1	Q96HL8	342 aa	Predicted RBP	13.98	□□□□□ -0.17
HERPUD1-215	ENST00000568676	NPAS1	Q99742	590 aa		13.98	□□□□□ -0.17
HERPUD1-215	ENST00000568676	HOXD1	Q9GZZ0	328 aa		13.98	□□□□□ -0.17
HERPUD1-215	ENST00000568676	BCO1	Q9HAY6	547 aa		13.98	□□□□□ -0.17
HERPUD1-215	ENST00000568676	ACSS1	Q9NUB1	689 aa	Predicted RBP	13.98	□□□□□ -0.17
HERPUD1-215	ENST00000568676	GIN1	Q9NXP7	522 aa		13.98	□□□□□ -0.17
HERPUD1-215	ENST00000568676	LPAR3	Q9UBY5	353 aa		13.98	□□□□□ -0.17
HERPUD1-215	ENST00000568676	CR1	P17927	2039 aa		13.98	□□□□□ -0.17
HERPUD1-215	ENST00000568676	GIMAP1-GIMAP5	A0A087WTJ2	511 aa		13.97	□□□□□ -0.17
HERPUD1-215	ENST00000568676	GOLGA8Q	A0A0J9YX86	632 aa		13.97	□□□□□ -0.17
HERPUD1-215	ENST00000568676	GOLGA8O	A6NCC3	632 aa		13.97	□□□□□ -0.17
HERPUD1-215	ENST00000568676	DPRX	A6NFQ7	191 aa		13.97	□□□□□ -0.17
HERPUD1-215	ENST00000568676	GOLGA8N	F8WBI6	632 aa		13.97	□□□□□ -0.17
HERPUD1-215	ENST00000568676		H3BNH8	94 aa		13.97	□□□□□ -0.17
HERPUD1-215	ENST00000568676	GOLGA8R	I6L899	631 aa		13.97	□□□□□ -0.17
HERPUD1-215	ENST00000568676	RGS14	O43566	566 aa		13.97	□□□□□ -0.17
HERPUD1-215	ENST00000568676	CRCP	O75575	148 aa		13.97	□□□□□ -0.17
HERPUD1-215	ENST00000568676	ALOX5	P09917	674 aa		13.97	□□□□□ -0.17
HERPUD1-215	ENST00000568676	THBS2	P35442	1172 aa		13.97	□□□□□ -0.17
HERPUD1-215	ENST00000568676	FRK	P42685	505 aa	Predicted RBP	13.97	□□□□□ -0.17
HERPUD1-215	ENST00000568676	PRIM2	P49643	509 aa		13.97	□□□□□ -0.17
HERPUD1-215	ENST00000568676	PRKAG1	P54619	331 aa		13.97	□□□□□ -0.17
HERPUD1-215	ENST00000568676	RAC3	P60763	192 aa		13.97	□□□□□ -0.17
HERPUD1-215	ENST00000568676	PPA1	Q15181	289 aa		13.97	□□□□□ -0.17
HERPUD1-215	ENST00000568676	TIMM23B	Q5SRD1	257 aa		13.97	□□□□□ -0.17
HERPUD1-215	ENST00000568676	C6orf52	Q5T4I8	152 aa		13.97	□□□□□ -0.17
HERPUD1-215	ENST00000568676	SEZ6L2	Q6UXD5	910 aa		13.97	□□□□□ -0.17
HERPUD1-215	ENST00000568676	CEP112	Q8N8E3	955 aa		13.97	□□□□□ -0.17
HERPUD1-215	ENST00000568676	SLC16A11	Q8NCK7	471 aa		13.97	□□□□□ -0.17
HERPUD1-215	ENST00000568676	ZFP90	Q8TF47	636 aa		13.97	□□□□□ -0.17
HERPUD1-215	ENST00000568676	NEUROG1	Q92886	237 aa		13.97	□□□□□ -0.17
HERPUD1-215	ENST00000568676	ARL8A	Q96BM9	186 aa		13.97	□□□□□ -0.17
HERPUD1-215	ENST00000568676	GIMAP5	Q96F15	307 aa		13.97	□□□□□ -0.17
HERPUD1-215	ENST00000568676	STAC	Q99469	402 aa		13.97	□□□□□ -0.17
HERPUD1-215	ENST00000568676	CCT7	Q99832	543 aa		13.97	□□□□□ -0.17
HERPUD1-215	ENST00000568676	BTBD2	Q9BX70	525 aa		13.97	□□□□□ -0.17
HERPUD1-215	ENST00000568676	DUSP22	Q9NRW4	184 aa		13.97	□□□□□ -0.17
HERPUD1-215	ENST00000568676	MGAT4B	Q9UQ53	548 aa		13.97	□□□□□ -0.17
HERPUD1-215	ENST00000568676	ANK3	Q12955	4377 aa	Known RBP	13.97	□□□□□ -0.17
HERPUD1-215	ENST00000568676	UBFD1	O14562	309 aa	Known RBP	13.96	□□□□□ -0.17
HERPUD1-215	ENST00000568676	ZNF195	O14628	629 aa		13.96	□□□□□ -0.17
HERPUD1-215	ENST00000568676	PHF1	O43189	567 aa	Predicted RBP	13.96	□□□□□ -0.17
HERPUD1-215	ENST00000568676	SEC22B	O75396	215 aa		13.96	□□□□□ -0.17
HERPUD1-215	ENST00000568676	CD8A	P01732	235 aa		13.96	□□□□□ -0.17
HERPUD1-215	ENST00000568676	ABHD2	P08910	425 aa		13.96	□□□□□ -0.17
HERPUD1-215	ENST00000568676	ACP2	P11117	423 aa		13.96	□□□□□ -0.17
HERPUD1-215	ENST00000568676	OR3A2	P47893	321 aa		13.96	□□□□□ -0.17
HERPUD1-215	ENST00000568676	P2RX1	P51575	399 aa		13.96	□□□□□ -0.17
HERPUD1-215	ENST00000568676	NUDT6	P53370	316 aa		13.96	□□□□□ -0.17
HERPUD1-215	ENST00000568676	CDH11	P55287	796 aa		13.96	□□□□□ -0.17
HERPUD1-215	ENST00000568676	FOXA1	P55317	472 aa		13.96	□□□□□ -0.17
HERPUD1-215	ENST00000568676	POU6F2	P78424	691 aa	Predicted RBP	13.96	□□□□□ -0.17

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