RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 CXorf36Q9H7Y0 433 aa4.31□□□□□ -1.72
CLK3-219ENST00000567805 AKTIPQ9H8T0 292 aa4.31□□□□□ -1.72
CLK3-219ENST00000567805 RNF122Q9H9V4 155 aa4.31□□□□□ -1.72
CLK3-219ENST00000567805 KCNK9Q9NPC2 374 aa4.31□□□□□ -1.72
CLK3-219ENST00000567805 GPATCH2Q9NW75 528 aa4.31□□□□□ -1.72
CLK3-219ENST00000567805 FBXO34Q9NWN3 711 aa4.31□□□□□ -1.72
CLK3-219ENST00000567805 PAQR5Q9NXK6 330 aaPredicted RBP4.31□□□□□ -1.72
CLK3-219ENST00000567805 GALNT8Q9NY28 637 aa4.31□□□□□ -1.72
CLK3-219ENST00000567805 NDRG3Q9UGV2 375 aa4.31□□□□□ -1.72
CLK3-219ENST00000567805 HAO1Q9UJM8 370 aa4.31□□□□□ -1.72
CLK3-219ENST00000567805 ITGB1BP2Q9UKP3 347 aa4.31□□□□□ -1.72
CLK3-219ENST00000567805 PACSIN3Q9UKS6 424 aa4.31□□□□□ -1.72
CLK3-219ENST00000567805 VDAC3Q9Y277 283 aa4.31□□□□□ -1.72
CLK3-219ENST00000567805 ANKHD1Q8IWZ3 2542 aaKnown RBP4.31□□□□□ -1.72
CLK3-219ENST00000567805 HIVEP1P15822 2718 aa4.3□□□□□ -1.72
CLK3-219ENST00000567805 MED13LQ71F56 2210 aa4.3□□□□□ -1.72
CLK3-219ENST00000567805 ZFHX3Q15911 3703 aa4.3□□□□□ -1.72
CLK3-219ENST00000567805 RNF103-CHMP3A0A140T963 221 aa4.3□□□□□ -1.72
CLK3-219ENST00000567805 SH3D21A4FU49 640 aa4.3□□□□□ -1.72
CLK3-219ENST00000567805 DUXAA6NLW8 204 aa4.3□□□□□ -1.72
CLK3-219ENST00000567805 SHISA8B8ZZ34 492 aa4.3□□□□□ -1.72
CLK3-219ENST00000567805 NPIPB9F8W1W9 429 aa4.3□□□□□ -1.72
CLK3-219ENST00000567805 H0YC42 278 aa4.3□□□□□ -1.72
CLK3-219ENST00000567805 EIF1AYO14602 144 aaKnown RBP4.3□□□□□ -1.72
CLK3-219ENST00000567805 ADAMDEC1O15204 470 aa4.3□□□□□ -1.72
CLK3-219ENST00000567805 SMNDC1O75940 238 aaKnown RBP eCLIP4.3□□□□□ -1.72
CLK3-219ENST00000567805 AK1P00568 194 aa4.3□□□□□ -1.72
CLK3-219ENST00000567805 LINGO3P0C6S8 592 aa4.3□□□□□ -1.72
CLK3-219ENST00000567805 CD8BP10966 210 aa4.3□□□□□ -1.72
CLK3-219ENST00000567805 LBPP18428 481 aa4.3□□□□□ -1.72
CLK3-219ENST00000567805 BGNP21810 368 aa4.3□□□□□ -1.72
CLK3-219ENST00000567805 ME2P23368 584 aa4.3□□□□□ -1.72
CLK3-219ENST00000567805 PSMA4P25789 261 aaKnown RBP4.3□□□□□ -1.72
CLK3-219ENST00000567805 ELK4P28324 431 aa4.3□□□□□ -1.72
CLK3-219ENST00000567805 ADH6P28332 368 aa4.3□□□□□ -1.72
CLK3-219ENST00000567805 SOAT1P35610 550 aa4.3□□□□□ -1.72
CLK3-219ENST00000567805 EIF1P41567 113 aaKnown RBP4.3□□□□□ -1.72
CLK3-219ENST00000567805 KIR2DL2P43627 348 aaPredicted RBP4.3□□□□□ -1.72
CLK3-219ENST00000567805 EIF1AXP47813 144 aaKnown RBP4.3□□□□□ -1.72
CLK3-219ENST00000567805 ART1P52961 327 aa4.3□□□□□ -1.72
CLK3-219ENST00000567805 IST1P53990 364 aa4.3□□□□□ -1.72
CLK3-219ENST00000567805 CLNS1AP54105 237 aaKnown RBP4.3□□□□□ -1.72
CLK3-219ENST00000567805 SLC18A1P54219 525 aa4.3□□□□□ -1.72
CLK3-219ENST00000567805 ATP12AP54707 1039 aa4.3□□□□□ -1.72
CLK3-219ENST00000567805 TPD52P55327 224 aaPredicted RBP4.3□□□□□ -1.72
CLK3-219ENST00000567805 SUMO3P55854 103 aaPredicted RBP4.3□□□□□ -1.72
CLK3-219ENST00000567805 RAC1P63000 192 aa4.3□□□□□ -1.72
CLK3-219ENST00000567805 ZNF117Q03924 483 aa4.3□□□□□ -1.72
CLK3-219ENST00000567805 BST1Q10588 318 aa4.3□□□□□ -1.72
CLK3-219ENST00000567805 MPP2Q14168 576 aa4.3□□□□□ -1.72
CLK3-219ENST00000567805 PON3Q15166 354 aa4.3□□□□□ -1.72
CLK3-219ENST00000567805 GUSBP1Q15486 140 aa4.3□□□□□ -1.72
CLK3-219ENST00000567805 CD226Q15762 336 aa4.3□□□□□ -1.72
CLK3-219ENST00000567805 SGCBQ16585 318 aa4.3□□□□□ -1.72
CLK3-219ENST00000567805 OCLNQ16625 522 aa4.3□□□□□ -1.72
CLK3-219ENST00000567805 DPY19L1Q2PZI1 675 aa4.3□□□□□ -1.72
CLK3-219ENST00000567805 DCST2Q5T1A1 773 aa4.3□□□□□ -1.72
CLK3-219ENST00000567805 PDSS1Q5T2R2 415 aa4.3□□□□□ -1.72
CLK3-219ENST00000567805 ANXA8L1Q5VT79 327 aa4.3□□□□□ -1.72
CLK3-219ENST00000567805 HHATQ5VTY9 493 aa4.3□□□□□ -1.72
CLK3-219ENST00000567805 FBXW10Q5XX13 1052 aa4.3□□□□□ -1.72
CLK3-219ENST00000567805 OR4F3Q6IEY1 312 aa4.3□□□□□ -1.72
CLK3-219ENST00000567805 OGFOD2Q6N063 350 aa4.3□□□□□ -1.72
CLK3-219ENST00000567805 VWA1Q6PCB0 445 aa4.3□□□□□ -1.72
CLK3-219ENST00000567805 ESPNLQ6ZVH7 1005 aa4.3□□□□□ -1.72
CLK3-219ENST00000567805 FAM214BQ7L5A3 538 aa4.3□□□□□ -1.72
CLK3-219ENST00000567805 C6orf120Q7Z4R8 191 aa4.3□□□□□ -1.72
CLK3-219ENST00000567805 BTLAQ7Z6A9 289 aa4.3□□□□□ -1.72
CLK3-219ENST00000567805 CNEP1R1Q8N9A8 125 aa4.3□□□□□ -1.72
CLK3-219ENST00000567805 GATSQ8NAP1 163 aa4.3□□□□□ -1.72
CLK3-219ENST00000567805 CHDHQ8NE62 594 aaPredicted RBP4.3□□□□□ -1.72
CLK3-219ENST00000567805 VPS37AQ8NEZ2 397 aa4.3□□□□□ -1.72
CLK3-219ENST00000567805 OR5D16Q8NGK9 328 aa4.3□□□□□ -1.72
CLK3-219ENST00000567805 OR10D3Q8NH80 312 aa4.3□□□□□ -1.72
CLK3-219ENST00000567805 OR5AK3PQ8NH89 298 aa4.3□□□□□ -1.72
CLK3-219ENST00000567805 B4GALNT2Q8NHY0 566 aa4.3□□□□□ -1.72
CLK3-219ENST00000567805 FNDC9Q8TBE3 224 aa4.3□□□□□ -1.72
CLK3-219ENST00000567805 PHOSPHO1Q8TCT1 267 aa4.3□□□□□ -1.72
CLK3-219ENST00000567805 NUDT8Q8WV74 236 aa4.3□□□□□ -1.72
CLK3-219ENST00000567805 FIG4Q92562 907 aa4.3□□□□□ -1.72
CLK3-219ENST00000567805 NRGNQ92686 78 aa4.3□□□□□ -1.72
CLK3-219ENST00000567805 TESCQ96BS2 214 aa4.3□□□□□ -1.72
CLK3-219ENST00000567805 SH3YL1Q96HL8 342 aaPredicted RBP4.3□□□□□ -1.72
CLK3-219ENST00000567805 GMPPAQ96IJ6 420 aaPredicted RBP4.3□□□□□ -1.72
CLK3-219ENST00000567805 ZNF845Q96IR2 970 aaPredicted RBP4.3□□□□□ -1.72
CLK3-219ENST00000567805 ADGRG7Q96K78 797 aa4.3□□□□□ -1.72
CLK3-219ENST00000567805 PPP1R36Q96LQ0 422 aa4.3□□□□□ -1.72
CLK3-219ENST00000567805 RNF145Q96MT1 663 aa4.3□□□□□ -1.72
CLK3-219ENST00000567805 OR7D2Q96RA2 312 aa4.3□□□□□ -1.72
CLK3-219ENST00000567805 SORT1Q99523 831 aa4.3□□□□□ -1.72
CLK3-219ENST00000567805 FOXC2Q99958 501 aa4.3□□□□□ -1.72
CLK3-219ENST00000567805 PAIP2Q9BPZ3 127 aaKnown RBP4.3□□□□□ -1.72
CLK3-219ENST00000567805 SLC39A3Q9BRY0 314 aa4.3□□□□□ -1.72
CLK3-219ENST00000567805 NUF2Q9BZD4 464 aa4.3□□□□□ -1.72
CLK3-219ENST00000567805 PRRG4Q9BZD6 226 aa4.3□□□□□ -1.72
CLK3-219ENST00000567805 DPY30Q9C005 99 aa4.3□□□□□ -1.72
CLK3-219ENST00000567805 NMUR2Q9GZQ4 415 aa4.3□□□□□ -1.72
CLK3-219ENST00000567805 ZNF395Q9H8N7 513 aaPredicted RBP4.3□□□□□ -1.72
CLK3-219ENST00000567805 MEAF6Q9HAF1 191 aa4.3□□□□□ -1.72
CLK3-219ENST00000567805 GLRX2Q9NS18 164 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms