RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 GIMAP5Q96F15 307 aa13.73□□□□□ -0.21
PALB2-205ENST00000567003 C16orf58Q96GQ5 468 aa13.73□□□□□ -0.21
PALB2-205ENST00000567003 HDHD5Q9BXW7 423 aa13.73□□□□□ -0.21
PALB2-205ENST00000567003 POTEKPQ9BYX7 375 aa13.73□□□□□ -0.21
PALB2-205ENST00000567003 GSTO2Q9H4Y5 243 aa13.73□□□□□ -0.21
PALB2-205ENST00000567003 COQ10BQ9H8M1 238 aa13.73□□□□□ -0.21
PALB2-205ENST00000567003 LRTM1Q9HBL6 345 aa13.73□□□□□ -0.21
PALB2-205ENST00000567003 MID1IP1Q9NPA3 183 aa13.73□□□□□ -0.21
PALB2-205ENST00000567003 NGBQ9NPG2 151 aa13.73□□□□□ -0.21
PALB2-205ENST00000567003 CISD1Q9NZ45 108 aaKnown RBP13.73□□□□□ -0.21
PALB2-205ENST00000567003 NPAP1Q9NZP6 1156 aa13.73□□□□□ -0.21
PALB2-205ENST00000567003 B3GALT5Q9Y2C3 310 aa13.73□□□□□ -0.21
PALB2-205ENST00000567003 NPIPA5A0A0B4J1W7 369 aa13.72□□□□□ -0.21
PALB2-205ENST00000567003 FAM234BA2RU67 622 aa13.72□□□□□ -0.21
PALB2-205ENST00000567003 C9JVG2 144 aa13.72□□□□□ -0.21
PALB2-205ENST00000567003 NPIPA7E9PJI5 369 aa13.72□□□□□ -0.21
PALB2-205ENST00000567003 PDPK1O15530 556 aa13.72□□□□□ -0.21
PALB2-205ENST00000567003 KCNK2O95069 426 aa13.72□□□□□ -0.21
PALB2-205ENST00000567003 F12P00748 615 aaPredicted RBP13.72□□□□□ -0.21
PALB2-205ENST00000567003 LINGO3P0C6S8 592 aa13.72□□□□□ -0.21
PALB2-205ENST00000567003 NPIPA8P0DM63 369 aa13.72□□□□□ -0.21
PALB2-205ENST00000567003 EFNA1P20827 205 aaPredicted RBP13.72□□□□□ -0.21
PALB2-205ENST00000567003 ATP5F1P24539 256 aaPredicted RBP13.72□□□□□ -0.21
PALB2-205ENST00000567003 CASQ1P31415 396 aa13.72□□□□□ -0.21
PALB2-205ENST00000567003 NUDT6P53370 316 aa13.72□□□□□ -0.21
PALB2-205ENST00000567003 PRKAA2P54646 552 aa13.72□□□□□ -0.21
PALB2-205ENST00000567003 MANFP55145 182 aaKnown RBP13.72□□□□□ -0.21
PALB2-205ENST00000567003 IRX1P78414 480 aaPredicted RBP13.72□□□□□ -0.21
PALB2-205ENST00000567003 ZNF117Q03924 483 aa13.72□□□□□ -0.21
PALB2-205ENST00000567003 TMEM249Q2WGJ8 235 aa13.72□□□□□ -0.21
PALB2-205ENST00000567003 GTF2IRD2BQ6EKJ0 949 aa13.72□□□□□ -0.21
PALB2-205ENST00000567003 NOXRED1Q6NXP6 359 aa13.72□□□□□ -0.21
PALB2-205ENST00000567003 GTF2IRD2Q86UP8 949 aa13.72□□□□□ -0.21
PALB2-205ENST00000567003 DTX2Q86UW9 622 aa13.72□□□□□ -0.21
PALB2-205ENST00000567003 MMGT1Q8N4V1 131 aa13.72□□□□□ -0.21
PALB2-205ENST00000567003 CCNYL1Q8N7R7 359 aa13.72□□□□□ -0.21
PALB2-205ENST00000567003 SLC16A11Q8NCK7 471 aa13.72□□□□□ -0.21
PALB2-205ENST00000567003 NUP43Q8NFH3 380 aa13.72□□□□□ -0.21
PALB2-205ENST00000567003 OR2W6PQ8NHA6 318 aa13.72□□□□□ -0.21
PALB2-205ENST00000567003 B4GALNT2Q8NHY0 566 aa13.72□□□□□ -0.21
PALB2-205ENST00000567003 ACTRT2Q8TDY3 377 aa13.72□□□□□ -0.21
PALB2-205ENST00000567003 HOXB13Q92826 284 aaPredicted RBP13.72□□□□□ -0.21
PALB2-205ENST00000567003 ZNF775Q96BV0 537 aaPredicted RBP13.72□□□□□ -0.21
PALB2-205ENST00000567003 REXO5Q96IC2 774 aaKnown RBP13.72□□□□□ -0.21
PALB2-205ENST00000567003 RHNO1Q9BSD3 238 aa13.72□□□□□ -0.21
PALB2-205ENST00000567003 CXorf36Q9H7Y0 433 aa13.72□□□□□ -0.21
PALB2-205ENST00000567003 GRPEL1Q9HAV7 217 aa13.72□□□□□ -0.21
PALB2-205ENST00000567003 TNFRSF12AQ9NP84 129 aa13.72□□□□□ -0.21
PALB2-205ENST00000567003 SNX8Q9Y5X2 465 aa13.72□□□□□ -0.21
PALB2-205ENST00000567003 PTGDR2Q9Y5Y4 395 aa13.72□□□□□ -0.21
PALB2-205ENST00000567003 MALRD1Q5VYJ5 2156 aa13.71□□□□□ -0.21
PALB2-205ENST00000567003 SERTM1A2A2V5 107 aa13.71□□□□□ -0.21
PALB2-205ENST00000567003 NGFRP08138 427 aa13.71□□□□□ -0.21
PALB2-205ENST00000567003 SNRPAP09012 282 aaKnown RBP13.71□□□□□ -0.21
PALB2-205ENST00000567003 PABPC4LP0CB38 370 aaKnown RBP13.71□□□□□ -0.21
PALB2-205ENST00000567003 ENPP1P22413 925 aa13.71□□□□□ -0.21
PALB2-205ENST00000567003 SPOCK1Q08629 439 aa13.71□□□□□ -0.21
PALB2-205ENST00000567003 ITGADQ13349 1161 aa13.71□□□□□ -0.21
PALB2-205ENST00000567003 RNPS1Q15287 305 aaKnown RBP13.71□□□□□ -0.21
PALB2-205ENST00000567003 TOMM34Q15785 309 aaPredicted RBP13.71□□□□□ -0.21
PALB2-205ENST00000567003 NDUFAF6Q330K2 333 aa13.71□□□□□ -0.21
PALB2-205ENST00000567003 TMEM176BQ3YBM2 270 aaPredicted RBP13.71□□□□□ -0.21
PALB2-205ENST00000567003 DNAJC14Q6Y2X3 702 aaPredicted RBP13.71□□□□□ -0.21
PALB2-205ENST00000567003 ZNF572Q7Z3I7 529 aaPredicted RBP13.71□□□□□ -0.21
PALB2-205ENST00000567003 RELL1Q8IUW5 271 aa13.71□□□□□ -0.21
PALB2-205ENST00000567003 CDRT4Q8N9R6 151 aa13.71□□□□□ -0.21
PALB2-205ENST00000567003 FBXO27Q8NI29 283 aa13.71□□□□□ -0.21
PALB2-205ENST00000567003 FAM110BQ8TC76 370 aa13.71□□□□□ -0.21
PALB2-205ENST00000567003 CPNE4Q96A23 557 aaPredicted RBP13.71□□□□□ -0.21
PALB2-205ENST00000567003 ZNF524Q96C55 264 aa13.71□□□□□ -0.21
PALB2-205ENST00000567003 L3HYPDHQ96EM0 354 aa13.71□□□□□ -0.21
PALB2-205ENST00000567003 CACNG6Q9BXT2 260 aa13.71□□□□□ -0.21
PALB2-205ENST00000567003 BARX1Q9HBU1 254 aaPredicted RBP13.71□□□□□ -0.21
PALB2-205ENST00000567003 GIN1Q9NXP7 522 aa13.71□□□□□ -0.21
PALB2-205ENST00000567003 ZNF180Q9UJW8 692 aa13.71□□□□□ -0.21
PALB2-205ENST00000567003 ING1Q9UK53 422 aaPredicted RBP13.71□□□□□ -0.21
PALB2-205ENST00000567003 A0A1W2PNR3 127 aa13.7□□□□□ -0.22
PALB2-205ENST00000567003 TTC36A6NLP5 189 aa13.7□□□□□ -0.22
PALB2-205ENST00000567003 GOLGA8RI6L899 631 aa13.7□□□□□ -0.22
PALB2-205ENST00000567003 SCDO00767 359 aa13.7□□□□□ -0.22
PALB2-205ENST00000567003 ABCD4O14678 606 aa13.7□□□□□ -0.22
PALB2-205ENST00000567003 AKAP10O43572 662 aa13.7□□□□□ -0.22
PALB2-205ENST00000567003 PRKD3O94806 890 aa13.7□□□□□ -0.22
PALB2-205ENST00000567003 YES1P07947 543 aa13.7□□□□□ -0.22
PALB2-205ENST00000567003 HPGDP15428 266 aa13.7□□□□□ -0.22
PALB2-205ENST00000567003 ZNF16P17020 682 aaPredicted RBP13.7□□□□□ -0.22
PALB2-205ENST00000567003 GCAP28676 217 aa13.7□□□□□ -0.22
PALB2-205ENST00000567003 P2RY6Q15077 328 aa13.7□□□□□ -0.22
PALB2-205ENST00000567003 PPA1Q15181 289 aa13.7□□□□□ -0.22
PALB2-205ENST00000567003 VPS26BQ4G0F5 336 aa13.7□□□□□ -0.22
PALB2-205ENST00000567003 CBLN3Q6UW01 205 aa13.7□□□□□ -0.22
PALB2-205ENST00000567003 SYT10Q6XYQ8 523 aa13.7□□□□□ -0.22
PALB2-205ENST00000567003 TDRPQ86YL5 185 aa13.7□□□□□ -0.22
PALB2-205ENST00000567003 ARIH2OSQ8N7S6 290 aa13.7□□□□□ -0.22
PALB2-205ENST00000567003 COX18Q8N8Q8 333 aa13.7□□□□□ -0.22
PALB2-205ENST00000567003 OR10H5Q8NGA6 315 aa13.7□□□□□ -0.22
PALB2-205ENST00000567003 CLHC1Q8NHS4 586 aa13.7□□□□□ -0.22
PALB2-205ENST00000567003 MS4A4EQ96PG1 132 aa13.7□□□□□ -0.22
PALB2-205ENST00000567003 KCNK17Q96T54 332 aa13.7□□□□□ -0.22
PALB2-205ENST00000567003 MANSC1Q9H8J5 431 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms