RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 KRT16P08779 473 aa13.39□□□□□ -0.27
RNF40-209ENST00000566703 NID1P14543 1247 aa13.39□□□□□ -0.27
RNF40-209ENST00000566703 ATP6V1C1P21283 382 aa13.39□□□□□ -0.27
RNF40-209ENST00000566703 HPCAL1P37235 193 aa13.39□□□□□ -0.27
RNF40-209ENST00000566703 RNPS1Q15287 305 aaKnown RBP13.39□□□□□ -0.27
RNF40-209ENST00000566703 CD226Q15762 336 aa13.39□□□□□ -0.27
RNF40-209ENST00000566703 LSM12Q3MHD2 195 aaKnown RBP13.39□□□□□ -0.27
RNF40-209ENST00000566703 KLHL26Q53HC5 615 aa13.39□□□□□ -0.27
RNF40-209ENST00000566703 CDC73Q6P1J9 531 aa13.39□□□□□ -0.27
RNF40-209ENST00000566703 ZNF704Q6ZNC4 412 aaPredicted RBP13.39□□□□□ -0.27
RNF40-209ENST00000566703 C4orf33Q8N1A6 199 aa13.39□□□□□ -0.27
RNF40-209ENST00000566703 CIARTQ8N365 385 aaPredicted RBP13.39□□□□□ -0.27
RNF40-209ENST00000566703 ZNF611Q8N823 705 aa13.39□□□□□ -0.27
RNF40-209ENST00000566703 ZNF527Q8NB42 609 aa13.39□□□□□ -0.27
RNF40-209ENST00000566703 STEAP2Q8NFT2 490 aa13.39□□□□□ -0.27
RNF40-209ENST00000566703 CLHC1Q8NHS4 586 aa13.39□□□□□ -0.27
RNF40-209ENST00000566703 PSMA8Q8TAA3 256 aa13.39□□□□□ -0.27
RNF40-209ENST00000566703 TMEM171Q8WVE6 324 aa13.39□□□□□ -0.27
RNF40-209ENST00000566703 TWIST2Q8WVJ9 160 aa13.39□□□□□ -0.27
RNF40-209ENST00000566703 CPNE4Q96A23 557 aaPredicted RBP13.39□□□□□ -0.27
RNF40-209ENST00000566703 PERPQ96FX8 193 aa13.39□□□□□ -0.27
RNF40-209ENST00000566703 SH3YL1Q96HL8 342 aaPredicted RBP13.39□□□□□ -0.27
RNF40-209ENST00000566703 REXO5Q96IC2 774 aaKnown RBP13.39□□□□□ -0.27
RNF40-209ENST00000566703 TMEM204Q9BSN7 226 aa13.39□□□□□ -0.27
RNF40-209ENST00000566703 ACTRT3Q9BYD9 372 aa13.39□□□□□ -0.27
RNF40-209ENST00000566703 ACTR6Q9GZN1 396 aa13.39□□□□□ -0.27
RNF40-209ENST00000566703 FIS1Q9Y3D6 152 aa13.39□□□□□ -0.27
RNF40-209ENST00000566703 GPC6Q9Y625 555 aaPredicted RBP13.39□□□□□ -0.27
RNF40-209ENST00000566703 ZNF195O14628 629 aa13.38□□□□□ -0.27
RNF40-209ENST00000566703 SCAMP2O15127 329 aaKnown RBP13.38□□□□□ -0.27
RNF40-209ENST00000566703 OPN1LWP04000 364 aa13.38□□□□□ -0.27
RNF40-209ENST00000566703 AGTR1P30556 359 aa13.38□□□□□ -0.27
RNF40-209ENST00000566703 ALDH3A1P30838 453 aa13.38□□□□□ -0.27
RNF40-209ENST00000566703 PTH2RP49190 550 aa13.38□□□□□ -0.27
RNF40-209ENST00000566703 CCT3P49368 545 aaKnown RBP13.38□□□□□ -0.27
RNF40-209ENST00000566703 P2RX1P51575 399 aa13.38□□□□□ -0.27
RNF40-209ENST00000566703 LASP1Q14847 261 aaKnown RBP13.38□□□□□ -0.27
RNF40-209ENST00000566703 GALNTL6Q49A17 601 aa13.38□□□□□ -0.27
RNF40-209ENST00000566703 ARL13AQ5H913 290 aaPredicted RBP13.38□□□□□ -0.27
RNF40-209ENST00000566703 TMEM201Q5SNT2 666 aa13.38□□□□□ -0.27
RNF40-209ENST00000566703 CCNJQ5T5M9 372 aa13.38□□□□□ -0.27
RNF40-209ENST00000566703 ADAM5Q6NVV9 412 aa13.38□□□□□ -0.27
RNF40-209ENST00000566703 DDIASQ8IXT1 998 aa13.38□□□□□ -0.27
RNF40-209ENST00000566703 GSPT2Q8IYD1 628 aaKnown RBP13.38□□□□□ -0.27
RNF40-209ENST00000566703 OR56A1Q8NGH5 318 aa13.38□□□□□ -0.27
RNF40-209ENST00000566703 FBXO30Q8TB52 745 aa13.38□□□□□ -0.27
RNF40-209ENST00000566703 PHOSPHO1Q8TCT1 267 aa13.38□□□□□ -0.27
RNF40-209ENST00000566703 ADAMTS15Q8TE58 950 aa13.38□□□□□ -0.27
RNF40-209ENST00000566703 EPS8L3Q8TE67 593 aaKnown RBP13.38□□□□□ -0.27
RNF40-209ENST00000566703 RNF128Q8TEB7 428 aa13.38□□□□□ -0.27
RNF40-209ENST00000566703 JADE3Q92613 823 aa13.38□□□□□ -0.27
RNF40-209ENST00000566703 MOAP1Q96BY2 351 aa13.38□□□□□ -0.27
RNF40-209ENST00000566703 COQ8BQ96D53 544 aa13.38□□□□□ -0.27
RNF40-209ENST00000566703 PRPF18Q99633 342 aaKnown RBP13.38□□□□□ -0.27
RNF40-209ENST00000566703 TACO1Q9BSH4 297 aaKnown RBP13.38□□□□□ -0.27
RNF40-209ENST00000566703 CXorf56Q9H5V9 222 aa13.38□□□□□ -0.27
RNF40-209ENST00000566703 ATAD3AQ9NVI7 634 aa13.38□□□□□ -0.27
RNF40-209ENST00000566703 FAF1Q9UNN5 650 aaPredicted RBP13.38□□□□□ -0.27
RNF40-209ENST00000566703 SNX8Q9Y5X2 465 aa13.38□□□□□ -0.27
RNF40-209ENST00000566703 ZNF469Q96JG9 3925 aaPredicted RBP13.38□□□□□ -0.27
RNF40-209ENST00000566703 HRNRQ86YZ3 2850 aaPredicted RBP13.38□□□□□ -0.27
RNF40-209ENST00000566703 SMIM23A6NLE4 172 aa13.37□□□□□ -0.27
RNF40-209ENST00000566703 HS3ST1O14792 307 aa13.37□□□□□ -0.27
RNF40-209ENST00000566703 PIP5K1BO14986 540 aa13.37□□□□□ -0.27
RNF40-209ENST00000566703 PRKD3O94806 890 aa13.37□□□□□ -0.27
RNF40-209ENST00000566703 CHRNGP07510 517 aa13.37□□□□□ -0.27
RNF40-209ENST00000566703 LAMP1P11279 417 aa13.37□□□□□ -0.27
RNF40-209ENST00000566703 SERPINB5P36952 375 aa13.37□□□□□ -0.27
RNF40-209ENST00000566703 ATP12AP54707 1039 aa13.37□□□□□ -0.27
RNF40-209ENST00000566703 ZNF239Q16600 458 aaKnown RBP13.37□□□□□ -0.27
RNF40-209ENST00000566703 SLC43A2Q8N370 569 aa13.37□□□□□ -0.27
RNF40-209ENST00000566703 RIBC1Q8N443 379 aaPredicted RBP13.37□□□□□ -0.27
RNF40-209ENST00000566703 BANPQ8N9N5 519 aa13.37□□□□□ -0.27
RNF40-209ENST00000566703 OR7A2PQ8NGA2 310 aa13.37□□□□□ -0.27
RNF40-209ENST00000566703 NUDT8Q8WV74 236 aa13.37□□□□□ -0.27
RNF40-209ENST00000566703 ROBO4Q8WZ75 1007 aa13.37□□□□□ -0.27
RNF40-209ENST00000566703 CDS1Q92903 461 aa13.37□□□□□ -0.27
RNF40-209ENST00000566703 PLPPR2Q96GM1 343 aa13.37□□□□□ -0.27
RNF40-209ENST00000566703 APOPT1Q96IL0 206 aa13.37□□□□□ -0.27
RNF40-209ENST00000566703 TMEM185BQ9H7F4 350 aa13.37□□□□□ -0.27
RNF40-209ENST00000566703 NGBQ9NPG2 151 aa13.37□□□□□ -0.27
RNF40-209ENST00000566703 ICAM5Q9UMF0 924 aa13.37□□□□□ -0.27
RNF40-209ENST00000566703 ABCA2Q9BZC7 2435 aa13.37□□□□□ -0.27
RNF40-209ENST00000566703 GTPBP1O00178 669 aaKnown RBP13.36□□□□□ -0.27
RNF40-209ENST00000566703 EFNA2O43921 213 aa13.36□□□□□ -0.27
RNF40-209ENST00000566703 PEX11AO75192 247 aa13.36□□□□□ -0.27
RNF40-209ENST00000566703 CNOT4O95628 575 aaKnown RBP13.36□□□□□ -0.27
RNF40-209ENST00000566703 YES1P07947 543 aa13.36□□□□□ -0.27
RNF40-209ENST00000566703 PRPS1L1P21108 318 aa13.36□□□□□ -0.27
RNF40-209ENST00000566703 SFTPDP35247 375 aa13.36□□□□□ -0.27
RNF40-209ENST00000566703 ZNF117Q03924 483 aa13.36□□□□□ -0.27
RNF40-209ENST00000566703 FOXF1Q12946 379 aa13.36□□□□□ -0.27
RNF40-209ENST00000566703 ATP6AP1LQ52LC2 224 aa13.36□□□□□ -0.27
RNF40-209ENST00000566703 XKR7Q5GH72 579 aa13.36□□□□□ -0.27
RNF40-209ENST00000566703 SLC25A53Q5H9E4 307 aa13.36□□□□□ -0.27
RNF40-209ENST00000566703 SFRP5Q5T4F7 317 aa13.36□□□□□ -0.27
RNF40-209ENST00000566703 BHLHB9Q6PI77 547 aa13.36□□□□□ -0.27
RNF40-209ENST00000566703 WFDC8Q8IUA0 241 aa13.36□□□□□ -0.27
RNF40-209ENST00000566703 GABRG1Q8N1C3 465 aa13.36□□□□□ -0.27
RNF40-209ENST00000566703 FBXO27Q8NI29 283 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms