RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 ZNF260Q3ZCT1 412 aa2.9□□□□□ -1.95
HERPUD1-211ENST00000566550 OTUD3Q5T2D3 398 aaPredicted RBP2.9□□□□□ -1.95
HERPUD1-211ENST00000566550 GPR157Q5UAW9 335 aa2.9□□□□□ -1.95
HERPUD1-211ENST00000566550 OR52W1Q6IF63 320 aa2.9□□□□□ -1.95
HERPUD1-211ENST00000566550 LEG1Q6P5S2 330 aa2.9□□□□□ -1.95
HERPUD1-211ENST00000566550 UNQ6126/PRO20091Q6UXV3 157 aa2.9□□□□□ -1.95
HERPUD1-211ENST00000566550 HACD2Q6Y1H2 254 aa2.9□□□□□ -1.95
HERPUD1-211ENST00000566550 COLCA1Q6ZS62 124 aa2.9□□□□□ -1.95
HERPUD1-211ENST00000566550 CYS1Q717R9 158 aa2.9□□□□□ -1.95
HERPUD1-211ENST00000566550 GPR142Q7Z601 462 aa2.9□□□□□ -1.95
HERPUD1-211ENST00000566550 CCDC65Q8IXS2 484 aa2.9□□□□□ -1.95
HERPUD1-211ENST00000566550 KIRREL3Q8IZU9 778 aa2.9□□□□□ -1.95
HERPUD1-211ENST00000566550 FAM58AQ8N1B3 248 aa2.9□□□□□ -1.95
HERPUD1-211ENST00000566550 LINC01561Q8N1V8 128 aa2.9□□□□□ -1.95
HERPUD1-211ENST00000566550 ATP6V0D2Q8N8Y2 350 aa2.9□□□□□ -1.95
HERPUD1-211ENST00000566550 PRR26Q8N8Z3 221 aa2.9□□□□□ -1.95
HERPUD1-211ENST00000566550 ZNF114Q8NC26 417 aa2.9□□□□□ -1.95
HERPUD1-211ENST00000566550 OR4C5Q8NGB2 326 aa2.9□□□□□ -1.95
HERPUD1-211ENST00000566550 OR4C3Q8NH37 302 aa2.9□□□□□ -1.95
HERPUD1-211ENST00000566550 CLHC1Q8NHS4 586 aa2.9□□□□□ -1.95
HERPUD1-211ENST00000566550 C8orf46Q8TAG6 207 aa2.9□□□□□ -1.95
HERPUD1-211ENST00000566550 NDNFQ8TB73 568 aa2.9□□□□□ -1.95
HERPUD1-211ENST00000566550 ASB9Q96DX5 294 aa2.9□□□□□ -1.95
HERPUD1-211ENST00000566550 ZNF479Q96JC4 524 aa2.9□□□□□ -1.95
HERPUD1-211ENST00000566550 SERAC1Q96JX3 654 aa2.9□□□□□ -1.95
HERPUD1-211ENST00000566550 C2orf48Q96LS8 159 aa2.9□□□□□ -1.95
HERPUD1-211ENST00000566550 ZNF396Q96N95 335 aaPredicted RBP2.9□□□□□ -1.95
HERPUD1-211ENST00000566550 TMEM246Q9BRR3 403 aa2.9□□□□□ -1.95
HERPUD1-211ENST00000566550 SF3B5Q9BWJ5 86 aaKnown RBP2.9□□□□□ -1.95
HERPUD1-211ENST00000566550 FRMD8P1Q9BZ68 369 aaPredicted RBP2.9□□□□□ -1.95
HERPUD1-211ENST00000566550 MFFQ9GZY8 342 aa2.9□□□□□ -1.95
HERPUD1-211ENST00000566550 COMMD4Q9H0A8 199 aa2.9□□□□□ -1.95
HERPUD1-211ENST00000566550 GAL3ST2Q9H3Q3 398 aa2.9□□□□□ -1.95
HERPUD1-211ENST00000566550 UGT1A10Q9HAW8 530 aa2.9□□□□□ -1.95
HERPUD1-211ENST00000566550 POPDC2Q9HBU9 364 aa2.9□□□□□ -1.95
HERPUD1-211ENST00000566550 MRPL47Q9HD33 250 aaKnown RBP2.9□□□□□ -1.95
HERPUD1-211ENST00000566550 NT5MQ9NPB1 228 aa2.9□□□□□ -1.95
HERPUD1-211ENST00000566550 DYRK4Q9NR20 520 aa2.9□□□□□ -1.95
HERPUD1-211ENST00000566550 INPP5EQ9NRR6 644 aa2.9□□□□□ -1.95
HERPUD1-211ENST00000566550 NRBP2Q9NSY0 501 aa2.9□□□□□ -1.95
HERPUD1-211ENST00000566550 POT1Q9NUX5 634 aa2.9□□□□□ -1.95
HERPUD1-211ENST00000566550 BFARQ9NZS9 450 aa2.9□□□□□ -1.95
HERPUD1-211ENST00000566550 CD300AQ9UGN4 299 aa2.9□□□□□ -1.95
HERPUD1-211ENST00000566550 PURGQ9UJV8 347 aaKnown RBP2.9□□□□□ -1.95
HERPUD1-211ENST00000566550 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP2.9□□□□□ -1.95
HERPUD1-211ENST00000566550 MYO6Q9UM54 1294 aa2.9□□□□□ -1.95
HERPUD1-211ENST00000566550 RASD1Q9Y272 281 aa2.9□□□□□ -1.95
HERPUD1-211ENST00000566550 SELENOKQ9Y6D0 94 aa2.9□□□□□ -1.95
HERPUD1-211ENST00000566550 TTC37Q6PGP7 1564 aa2.9□□□□□ -1.95
HERPUD1-211ENST00000566550 PRDM2Q13029 1718 aa2.9□□□□□ -1.95
HERPUD1-211ENST00000566550 NEDD4P46934 1319 aa2.9□□□□□ -1.95
HERPUD1-211ENST00000566550 SH3TC1Q8TE82 1336 aa2.9□□□□□ -1.95
HERPUD1-211ENST00000566550 SMCHD1A6NHR9 2005 aa2.9□□□□□ -1.95
HERPUD1-211ENST00000566550 CKAP5Q14008 2032 aa2.9□□□□□ -1.95
HERPUD1-211ENST00000566550 CPS1P31327 1500 aa2.89□□□□□ -1.95
HERPUD1-211ENST00000566550 LRRC7Q96NW7 1537 aa2.89□□□□□ -1.95
HERPUD1-211ENST00000566550 DCAF1Q9Y4B6 1507 aa2.89□□□□□ -1.95
HERPUD1-211ENST00000566550 IGLV5-37A0A075B6J1 123 aa2.89□□□□□ -1.95
HERPUD1-211ENST00000566550 IGLV5-45A0A087WSX0 123 aa2.89□□□□□ -1.95
HERPUD1-211ENST00000566550 NPIPA5A0A0B4J1W7 369 aa2.89□□□□□ -1.95
HERPUD1-211ENST00000566550 A0A0J9YYE9 177 aa2.89□□□□□ -1.95
HERPUD1-211ENST00000566550 A0A1B0GUH1 482 aa2.89□□□□□ -1.95
HERPUD1-211ENST00000566550 SERPINE3A8MV23 424 aa2.89□□□□□ -1.95
HERPUD1-211ENST00000566550 A8MXQ7 604 aa2.89□□□□□ -1.95
HERPUD1-211ENST00000566550 NPIPA7E9PJI5 369 aa2.89□□□□□ -1.95
HERPUD1-211ENST00000566550 NPIPA5E9PKD4 350 aa2.89□□□□□ -1.95
HERPUD1-211ENST00000566550 HIP1O00291 1037 aa2.89□□□□□ -1.95
HERPUD1-211ENST00000566550 FCN1O00602 326 aa2.89□□□□□ -1.95
HERPUD1-211ENST00000566550 MSH4O15457 936 aa2.89□□□□□ -1.95
HERPUD1-211ENST00000566550 PSTPIP1O43586 416 aa2.89□□□□□ -1.95
HERPUD1-211ENST00000566550 RAMP3O60896 148 aa2.89□□□□□ -1.95
HERPUD1-211ENST00000566550 OR2F2O95006 317 aa2.89□□□□□ -1.95
HERPUD1-211ENST00000566550 ANGPTL1O95841 491 aa2.89□□□□□ -1.95
HERPUD1-211ENST00000566550 TRBC1P01850 177 aa2.89□□□□□ -1.95
HERPUD1-211ENST00000566550 PRSS2P07478 247 aa2.89□□□□□ -1.95
HERPUD1-211ENST00000566550 UMODP07911 640 aa2.89□□□□□ -1.95
HERPUD1-211ENST00000566550 UBCP0CG48 685 aaKnown RBP2.89□□□□□ -1.95
HERPUD1-211ENST00000566550 NPIPA8P0DM63 369 aa2.89□□□□□ -1.95
HERPUD1-211ENST00000566550 SLC2A2P11168 524 aaPredicted RBP2.89□□□□□ -1.95
HERPUD1-211ENST00000566550 FGF3P11487 239 aaPredicted RBP2.89□□□□□ -1.95
HERPUD1-211ENST00000566550 HOXB2P14652 356 aa2.89□□□□□ -1.95
HERPUD1-211ENST00000566550 H2AFXP16104 143 aaPredicted RBP2.89□□□□□ -1.95
HERPUD1-211ENST00000566550 C4BPBP20851 252 aa2.89□□□□□ -1.95
HERPUD1-211ENST00000566550 PROZP22891 400 aa2.89□□□□□ -1.95
HERPUD1-211ENST00000566550 ATP5A1P25705 553 aaKnown RBP2.89□□□□□ -1.95
HERPUD1-211ENST00000566550 STOMP27105 288 aa2.89□□□□□ -1.95
HERPUD1-211ENST00000566550 GNA11P29992 359 aa2.89□□□□□ -1.95
HERPUD1-211ENST00000566550 CRYBB2P43320 205 aa2.89□□□□□ -1.95
HERPUD1-211ENST00000566550 GNPDA1P46926 289 aa2.89□□□□□ -1.95
HERPUD1-211ENST00000566550 OR3A2P47893 321 aa2.89□□□□□ -1.95
HERPUD1-211ENST00000566550 DUSP3P51452 185 aaPredicted RBP2.89□□□□□ -1.95
HERPUD1-211ENST00000566550 CDK16Q00536 496 aa2.89□□□□□ -1.95
HERPUD1-211ENST00000566550 PLOD1Q02809 727 aaPredicted RBP2.89□□□□□ -1.95
HERPUD1-211ENST00000566550 POU3F1Q03052 451 aaPredicted RBP2.89□□□□□ -1.95
HERPUD1-211ENST00000566550 CCDC173Q0VFZ6 552 aa2.89□□□□□ -1.95
HERPUD1-211ENST00000566550 DLG1Q12959 904 aa2.89□□□□□ -1.95
HERPUD1-211ENST00000566550 ITIH4Q14624 930 aa2.89□□□□□ -1.95
HERPUD1-211ENST00000566550 NFATC4Q14934 902 aa2.89□□□□□ -1.95
HERPUD1-211ENST00000566550 GLYR1Q49A26 553 aaPredicted RBP2.89□□□□□ -1.95
HERPUD1-211ENST00000566550 TMEM52BQ4KMG9 183 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms