RNA–Protein interactions for RNA: ENST00000566333.1

CDH13-208, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-208ENST00000566333 JSRP1Q96MG2 331 aaPredicted RBP7.43□□□□□ -1.22
CDH13-208ENST00000566333 GNRHR2Q96P88 292 aa7.43□□□□□ -1.22
CDH13-208ENST00000566333 NPAS1Q99742 590 aa7.43□□□□□ -1.22
CDH13-208ENST00000566333 ECSITQ9BQ95 431 aa7.43□□□□□ -1.22
CDH13-208ENST00000566333 OR2B2Q9GZK3 357 aa7.43□□□□□ -1.22
CDH13-208ENST00000566333 HOXD1Q9GZZ0 328 aa7.43□□□□□ -1.22
CDH13-208ENST00000566333 PLSCR2Q9NRY7 297 aa7.43□□□□□ -1.22
CDH13-208ENST00000566333 ASF1BQ9NVP2 202 aa7.43□□□□□ -1.22
CDH13-208ENST00000566333 DNAJB12Q9NXW2 375 aaKnown RBP7.43□□□□□ -1.22
CDH13-208ENST00000566333 TAS2R1Q9NYW7 299 aa7.43□□□□□ -1.22
CDH13-208ENST00000566333 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.43□□□□□ -1.22
CDH13-208ENST00000566333 PPP4R1LQ9P1A2 415 aa7.43□□□□□ -1.22
CDH13-208ENST00000566333 CD300AQ9UGN4 299 aa7.43□□□□□ -1.22
CDH13-208ENST00000566333 ICAM5Q9UMF0 924 aa7.43□□□□□ -1.22
CDH13-208ENST00000566333 NCOA6Q14686 2063 aaPredicted RBP7.43□□□□□ -1.22
CDH13-208ENST00000566333 DOPEY1Q5JWR5 2465 aa7.43□□□□□ -1.22
CDH13-208ENST00000566333 INTS1Q8N201 2190 aaKnown RBP7.43□□□□□ -1.22
CDH13-208ENST00000566333 SPTBN1Q01082 2364 aaKnown RBP7.42□□□□□ -1.22
CDH13-208ENST00000566333 CACNA1CQ13936 2221 aa7.42□□□□□ -1.22
CDH13-208ENST00000566333 ELOVL7A1L3X0 281 aa7.42□□□□□ -1.22
CDH13-208ENST00000566333 TMEM247A6NEH6 219 aa7.42□□□□□ -1.22
CDH13-208ENST00000566333 B2RBV5 119 aa7.42□□□□□ -1.22
CDH13-208ENST00000566333 B8ZZF3 427 aa7.42□□□□□ -1.22
CDH13-208ENST00000566333 C5orf58C9J3I9 102 aa7.42□□□□□ -1.22
CDH13-208ENST00000566333 ACOT7O00154 380 aa7.42□□□□□ -1.22
CDH13-208ENST00000566333 HCRTR2O43614 444 aa7.42□□□□□ -1.22
CDH13-208ENST00000566333 TPST1O60507 370 aa7.42□□□□□ -1.22
CDH13-208ENST00000566333 MFN2O95140 757 aa7.42□□□□□ -1.22
CDH13-208ENST00000566333 IGHG3P01860 377 aa7.42□□□□□ -1.22
CDH13-208ENST00000566333 HPNP05981 417 aa7.42□□□□□ -1.22
CDH13-208ENST00000566333 DBIP07108 87 aaKnown RBP7.42□□□□□ -1.22
CDH13-208ENST00000566333 PABPC4LP0CB38 370 aaKnown RBP7.42□□□□□ -1.22
CDH13-208ENST00000566333 UBTFL6P0CB48 400 aaPredicted RBP7.42□□□□□ -1.22
CDH13-208ENST00000566333 HSD17B1P14061 328 aa7.42□□□□□ -1.22
CDH13-208ENST00000566333 HPGDP15428 266 aa7.42□□□□□ -1.22
CDH13-208ENST00000566333 CD247P20963 164 aa7.42□□□□□ -1.22
CDH13-208ENST00000566333 GDF1P27539 372 aa7.42□□□□□ -1.22
CDH13-208ENST00000566333 MNAT1P51948 309 aa7.42□□□□□ -1.22
CDH13-208ENST00000566333 PPIAP62937 165 aaKnown RBP7.42□□□□□ -1.22
CDH13-208ENST00000566333 PLGLB1Q02325 96 aa7.42□□□□□ -1.22
CDH13-208ENST00000566333 C17orf67Q0P5P2 114 aa7.42□□□□□ -1.22
CDH13-208ENST00000566333 VEZF1Q14119 521 aa7.42□□□□□ -1.22
CDH13-208ENST00000566333 PLPPR5Q32ZL2 321 aa7.42□□□□□ -1.22
CDH13-208ENST00000566333 GLIPR1L2Q4G1C9 344 aa7.42□□□□□ -1.22
CDH13-208ENST00000566333 LIN52Q52LA3 116 aa7.42□□□□□ -1.22
CDH13-208ENST00000566333 ERICH5Q6P6B1 374 aa7.42□□□□□ -1.22
CDH13-208ENST00000566333 DHRS4L2Q6PKH6 230 aa7.42□□□□□ -1.22
CDH13-208ENST00000566333 ARSKQ6UWY0 536 aa7.42□□□□□ -1.22
CDH13-208ENST00000566333 C16orf89Q6UX73 402 aa7.42□□□□□ -1.22
CDH13-208ENST00000566333 CCDC80Q76M96 950 aa7.42□□□□□ -1.22
CDH13-208ENST00000566333 FGD2Q7Z6J4 655 aa7.42□□□□□ -1.22
CDH13-208ENST00000566333 SLC22A16Q86VW1 577 aa7.42□□□□□ -1.22
CDH13-208ENST00000566333 IFNEQ86WN2 208 aa7.42□□□□□ -1.22
CDH13-208ENST00000566333 SLC30A8Q8IWU4 369 aa7.42□□□□□ -1.22
CDH13-208ENST00000566333 CMIPQ8IY22 773 aa7.42□□□□□ -1.22
CDH13-208ENST00000566333 PEX5LQ8IYB4 626 aa7.42□□□□□ -1.22
CDH13-208ENST00000566333 CLIP4Q8N3C7 705 aa7.42□□□□□ -1.22
CDH13-208ENST00000566333 RNF148Q8N7C7 305 aa7.42□□□□□ -1.22
CDH13-208ENST00000566333 FAM156AQ8NDB6 213 aa7.42□□□□□ -1.22
CDH13-208ENST00000566333 FAM83FQ8NEG4 500 aaPredicted RBP7.42□□□□□ -1.22
CDH13-208ENST00000566333 GPR32P1Q8NGA4 272 aa7.42□□□□□ -1.22
CDH13-208ENST00000566333 OR1J4Q8NGS1 313 aa7.42□□□□□ -1.22
CDH13-208ENST00000566333 OR52P1PQ8NH57 321 aa7.42□□□□□ -1.22
CDH13-208ENST00000566333 CPT1CQ8TCG5 803 aa7.42□□□□□ -1.22
CDH13-208ENST00000566333 PHOSPHO1Q8TCT1 267 aa7.42□□□□□ -1.22
CDH13-208ENST00000566333 DUSP19Q8WTR2 217 aa7.42□□□□□ -1.22
CDH13-208ENST00000566333 CNOT9Q92600 299 aaKnown RBP7.42□□□□□ -1.22
CDH13-208ENST00000566333 SH3YL1Q96HL8 342 aaPredicted RBP7.42□□□□□ -1.22
CDH13-208ENST00000566333 KCTD14Q9BQ13 255 aaPredicted RBP7.42□□□□□ -1.22
CDH13-208ENST00000566333 C1orf21Q9H246 121 aa7.42□□□□□ -1.22
CDH13-208ENST00000566333 MTHFD2LQ9H903 347 aaPredicted RBP7.42□□□□□ -1.22
CDH13-208ENST00000566333 EXOSC3Q9NQT5 275 aaKnown RBP7.42□□□□□ -1.22
CDH13-208ENST00000566333 OLAHQ9NV23 265 aa7.42□□□□□ -1.22
CDH13-208ENST00000566333 RLIMQ9NVW2 624 aa7.42□□□□□ -1.22
CDH13-208ENST00000566333 NDE1Q9NXR1 346 aa7.42□□□□□ -1.22
CDH13-208ENST00000566333 QPCTLQ9NXS2 382 aa7.42□□□□□ -1.22
CDH13-208ENST00000566333 MED11Q9P086 117 aa7.42□□□□□ -1.22
CDH13-208ENST00000566333 B4GALT7Q9UBV7 327 aa7.42□□□□□ -1.22
CDH13-208ENST00000566333 SLC35A3Q9Y2D2 325 aa7.42□□□□□ -1.22
CDH13-208ENST00000566333 CARD8Q9Y2G2 431 aa7.42□□□□□ -1.22
CDH13-208ENST00000566333 AP3M1Q9Y2T2 418 aa7.42□□□□□ -1.22
CDH13-208ENST00000566333 MYO7BQ6PIF6 2116 aa7.42□□□□□ -1.22
CDH13-208ENST00000566333 C7orf72A4D263 438 aa7.41□□□□□ -1.22
CDH13-208ENST00000566333 ANKUB1A6NFN9 424 aa7.41□□□□□ -1.22
CDH13-208ENST00000566333 TTLL8A6PVC2 850 aa7.41□□□□□ -1.22
CDH13-208ENST00000566333 H3BNH8 94 aa7.41□□□□□ -1.22
CDH13-208ENST00000566333 ETV2O00321 342 aaPredicted RBP7.41□□□□□ -1.22
CDH13-208ENST00000566333 AP3D1O14617 1153 aa7.41□□□□□ -1.22
CDH13-208ENST00000566333 ZNF264O43296 627 aa7.41□□□□□ -1.22
CDH13-208ENST00000566333 FRS3O43559 492 aa7.41□□□□□ -1.22
CDH13-208ENST00000566333 GMFGO60234 142 aa7.41□□□□□ -1.22
CDH13-208ENST00000566333 ZIC3O60481 467 aa7.41□□□□□ -1.22
CDH13-208ENST00000566333 EIF4E2O60573 245 aaKnown RBP7.41□□□□□ -1.22
CDH13-208ENST00000566333 NTN1O95631 604 aa7.41□□□□□ -1.22
CDH13-208ENST00000566333 CSTAP01040 98 aa7.41□□□□□ -1.22
CDH13-208ENST00000566333 CRYABP02511 175 aaKnown RBP7.41□□□□□ -1.22
CDH13-208ENST00000566333 LINGO3P0C6S8 592 aa7.41□□□□□ -1.22
CDH13-208ENST00000566333 PRG2P13727 222 aa7.41□□□□□ -1.22
CDH13-208ENST00000566333 IL7RP16871 459 aa7.41□□□□□ -1.22
CDH13-208ENST00000566333 GGT1P19440 569 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms