RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 AZI2Q9H6S1 392 aa1.11□□□□□ -2.23
SMG1-212ENST00000566328 UBE2ZQ9H832 354 aaPredicted RBP1.11□□□□□ -2.23
SMG1-212ENST00000566328 Q9HAA7 133 aa1.11□□□□□ -2.23
SMG1-212ENST00000566328 C6orf50Q9HD87 102 aa1.11□□□□□ -2.23
SMG1-212ENST00000566328 XPNPEP1Q9NQW7 623 aa1.11□□□□□ -2.23
SMG1-212ENST00000566328 RGS18Q9NS28 235 aa1.11□□□□□ -2.23
SMG1-212ENST00000566328 NRBP2Q9NSY0 501 aa1.11□□□□□ -2.23
SMG1-212ENST00000566328 PLEK2Q9NYT0 353 aa1.11□□□□□ -2.23
SMG1-212ENST00000566328 PHF11Q9UIL8 331 aa1.11□□□□□ -2.23
SMG1-212ENST00000566328 PRG3Q9Y2Y8 225 aaPredicted RBP1.11□□□□□ -2.23
SMG1-212ENST00000566328 CACNG2Q9Y698 323 aa1.11□□□□□ -2.23
SMG1-212ENST00000566328 MGAQ8IWI9 3026 aa1.11□□□□□ -2.23
SMG1-212ENST00000566328 RIF1Q5UIP0 2472 aaKnown RBP1.11□□□□□ -2.23
SMG1-212ENST00000566328 ZMYM6O95789 1325 aa1.11□□□□□ -2.23
SMG1-212ENST00000566328 MROH7Q68CQ1 1323 aa1.11□□□□□ -2.23
SMG1-212ENST00000566328 WDR19Q8NEZ3 1342 aa1.11□□□□□ -2.23
SMG1-212ENST00000566328 NRCAMQ92823 1304 aa1.11□□□□□ -2.23
SMG1-212ENST00000566328 RAD50Q92878 1312 aa1.11□□□□□ -2.23
SMG1-212ENST00000566328 IGSF9BQ9UPX0 1349 aa1.11□□□□□ -2.23
SMG1-212ENST00000566328 MAST2Q6P0Q8 1798 aa1.11□□□□□ -2.23
SMG1-212ENST00000566328 SPTBN2O15020 2390 aa1.11□□□□□ -2.23
SMG1-212ENST00000566328 ZDBF2Q9HCK1 2354 aa1.11□□□□□ -2.23
SMG1-212ENST00000566328 EP300Q09472 2414 aaPredicted RBP1.1□□□□□ -2.23
SMG1-212ENST00000566328 MUC6Q6W4X9 2439 aa1.1□□□□□ -2.23
SMG1-212ENST00000566328 ATMQ13315 3056 aa1.1□□□□□ -2.23
SMG1-212ENST00000566328 BOD1L1Q8NFC6 3051 aa1.1□□□□□ -2.23
SMG1-212ENST00000566328 ANK1P16157 1881 aa1.1□□□□□ -2.23
SMG1-212ENST00000566328 PLXNA4Q9HCM2 1894 aa1.1□□□□□ -2.23
SMG1-212ENST00000566328 A0A0G2JMZ2 1700 aa1.1□□□□□ -2.23
SMG1-212ENST00000566328 F5P12259 2224 aa1.1□□□□□ -2.23
SMG1-212ENST00000566328 GOLGA8IPA6NC78 632 aa1.1□□□□□ -2.23
SMG1-212ENST00000566328 LRRIQ4A6NIV6 560 aa1.1□□□□□ -2.23
SMG1-212ENST00000566328 GOLGA8JA6NMD2 632 aa1.1□□□□□ -2.23
SMG1-212ENST00000566328 CCDC169A6NNP5 214 aa1.1□□□□□ -2.23
SMG1-212ENST00000566328 K7ERI5 159 aa1.1□□□□□ -2.23
SMG1-212ENST00000566328 SLC17A2O00624 439 aa1.1□□□□□ -2.23
SMG1-212ENST00000566328 ABCD4O14678 606 aa1.1□□□□□ -2.23
SMG1-212ENST00000566328 SLC16A4O15374 487 aa1.1□□□□□ -2.23
SMG1-212ENST00000566328 CCL16O15467 120 aa1.1□□□□□ -2.23
SMG1-212ENST00000566328 MBTPS2O43462 519 aa1.1□□□□□ -2.23
SMG1-212ENST00000566328 LCMT2O60294 686 aaKnown RBP1.1□□□□□ -2.23
SMG1-212ENST00000566328 ANXA9O76027 345 aa1.1□□□□□ -2.23
SMG1-212ENST00000566328 REC8O95072 547 aa1.1□□□□□ -2.23
SMG1-212ENST00000566328 DEXIO95424 95 aa1.1□□□□□ -2.23
SMG1-212ENST00000566328 DCNP07585 359 aaKnown RBP1.1□□□□□ -2.23
SMG1-212ENST00000566328 GSTA2P09210 222 aa1.1□□□□□ -2.23
SMG1-212ENST00000566328 GLULP15104 373 aa1.1□□□□□ -2.23
SMG1-212ENST00000566328 ARF4P18085 180 aaPredicted RBP1.1□□□□□ -2.23
SMG1-212ENST00000566328 GLRA1P23415 457 aa1.1□□□□□ -2.23
SMG1-212ENST00000566328 GLRA2P23416 452 aa1.1□□□□□ -2.23
SMG1-212ENST00000566328 U2AF2P26368 475 aaKnown RBP eCLIP1.1□□□□□ -2.233e-7■■■■■ 29.9
SMG1-212ENST00000566328 PSMA5P28066 241 aa1.1□□□□□ -2.23
SMG1-212ENST00000566328 GJB2P29033 226 aa1.1□□□□□ -2.23
SMG1-212ENST00000566328 GNA11P29992 359 aa1.1□□□□□ -2.23
SMG1-212ENST00000566328 NMT1P30419 496 aaKnown RBP1.1□□□□□ -2.23
SMG1-212ENST00000566328 YWHABP31946 246 aaKnown RBP1.1□□□□□ -2.23
SMG1-212ENST00000566328 OR1D2P34982 312 aa1.1□□□□□ -2.23
SMG1-212ENST00000566328 RFC2P35250 354 aa1.1□□□□□ -2.23
SMG1-212ENST00000566328 ARL2P36404 184 aa1.1□□□□□ -2.23
SMG1-212ENST00000566328 CCT6AP40227 531 aaKnown RBP1.1□□□□□ -2.23
SMG1-212ENST00000566328 TNFSF9P41273 254 aa1.1□□□□□ -2.23
SMG1-212ENST00000566328 OR1G1P47890 313 aa1.1□□□□□ -2.23
SMG1-212ENST00000566328 QARSP47897 775 aaKnown RBP1.1□□□□□ -2.23
SMG1-212ENST00000566328 ACOT2P49753 483 aa1.1□□□□□ -2.23
SMG1-212ENST00000566328 NUMBP49757 651 aa1.1□□□□□ -2.23
SMG1-212ENST00000566328 GPC3P51654 580 aa1.1□□□□□ -2.23
SMG1-212ENST00000566328 CRYBB1P53674 252 aaPredicted RBP1.1□□□□□ -2.23
SMG1-212ENST00000566328 KRTAP12-3P60328 96 aa1.1□□□□□ -2.23
SMG1-212ENST00000566328 PTENP60484 403 aa1.1□□□□□ -2.23
SMG1-212ENST00000566328 PSMC5P62195 406 aa1.1□□□□□ -2.23
SMG1-212ENST00000566328 MFGE8Q08431 387 aaPredicted RBP1.1□□□□□ -2.23
SMG1-212ENST00000566328 PSMD6Q15008 389 aa1.1□□□□□ -2.23
SMG1-212ENST00000566328 KARSQ15046 597 aaKnown RBP1.1□□□□□ -2.23
SMG1-212ENST00000566328 LBHQ53QV2 105 aaPredicted RBP1.1□□□□□ -2.23
SMG1-212ENST00000566328 TMEM31Q5JXX7 168 aa1.1□□□□□ -2.23
SMG1-212ENST00000566328 EOGTQ5NDL2 527 aa1.1□□□□□ -2.23
SMG1-212ENST00000566328 ERMARDQ5T6L9 678 aa1.1□□□□□ -2.23
SMG1-212ENST00000566328 SDHAF4Q5VUM1 108 aa1.1□□□□□ -2.23
SMG1-212ENST00000566328 TAF3Q5VWG9 929 aa1.1□□□□□ -2.23
SMG1-212ENST00000566328 TWF2Q6IBS0 349 aaKnown RBP1.1□□□□□ -2.23
SMG1-212ENST00000566328 SULT1C3Q6IMI6 304 aa1.1□□□□□ -2.23
SMG1-212ENST00000566328 KRT80Q6KB66 452 aa1.1□□□□□ -2.23
SMG1-212ENST00000566328 MFSD7Q6UXD7 560 aa1.1□□□□□ -2.23
SMG1-212ENST00000566328 CD300LGQ6UXG3 332 aa1.1□□□□□ -2.23
SMG1-212ENST00000566328 CYP4V2Q6ZWL3 525 aaPredicted RBP1.1□□□□□ -2.23
SMG1-212ENST00000566328 CATSPER4Q7RTX7 472 aa1.1□□□□□ -2.23
SMG1-212ENST00000566328 LINC01551Q86U37 167 aa1.1□□□□□ -2.23
SMG1-212ENST00000566328 ANKRD46Q86W74 232 aa1.1□□□□□ -2.23
SMG1-212ENST00000566328 DAW1Q8N136 415 aa1.1□□□□□ -2.23
SMG1-212ENST00000566328 DEFB119Q8N690 84 aa1.1□□□□□ -2.23
SMG1-212ENST00000566328 TMEM105Q8N8V8 129 aa1.1□□□□□ -2.23
SMG1-212ENST00000566328 SMYD1Q8NB12 490 aa1.1□□□□□ -2.23
SMG1-212ENST00000566328 COLGALT1Q8NBJ5 622 aa1.1□□□□□ -2.23
SMG1-212ENST00000566328 OCC1Q8TAD7 63 aa1.1□□□□□ -2.23
SMG1-212ENST00000566328 ITFG1Q8TB96 612 aa1.1□□□□□ -2.23
SMG1-212ENST00000566328 ANKRD49Q8WVL7 239 aa1.1□□□□□ -2.23
SMG1-212ENST00000566328 ING5Q8WYH8 240 aa1.1□□□□□ -2.23
SMG1-212ENST00000566328 MRPL38Q96DV4 380 aaKnown RBP1.1□□□□□ -2.23
SMG1-212ENST00000566328 RAB3CQ96E17 227 aa1.1□□□□□ -2.23
SMG1-212ENST00000566328 TCEAL4Q96EI5 215 aa1.1□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms