RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 KCNK9Q9NPC2 374 aa8□□□□□ -1.13
VPS9D1-205ENST00000565452 MED11Q9P086 117 aa8□□□□□ -1.13
VPS9D1-205ENST00000565452 PCTPQ9UKL6 214 aa8□□□□□ -1.13
VPS9D1-205ENST00000565452 PRKDCP78527 4128 aaKnown RBP8□□□□□ -1.13
VPS9D1-205ENST00000565452 GOLGA8QA0A0J9YX86 632 aa7.99□□□□□ -1.13
VPS9D1-205ENST00000565452 GOLGA8OA6NCC3 632 aa7.99□□□□□ -1.13
VPS9D1-205ENST00000565452 GOLGA8NF8WBI6 632 aa7.99□□□□□ -1.13
VPS9D1-205ENST00000565452 H0YIV9 168 aa7.99□□□□□ -1.13
VPS9D1-205ENST00000565452 NDUFB5O43674 189 aa7.99□□□□□ -1.13
VPS9D1-205ENST00000565452 NPHS1O60500 1241 aa7.99□□□□□ -1.13
VPS9D1-205ENST00000565452 PRAMEF4O60810 478 aa7.99□□□□□ -1.13
VPS9D1-205ENST00000565452 BPGMP07738 259 aa7.99□□□□□ -1.13
VPS9D1-205ENST00000565452 DHRS4L1P0CG22 281 aa7.99□□□□□ -1.13
VPS9D1-205ENST00000565452 IL12BP29460 328 aa7.99□□□□□ -1.13
VPS9D1-205ENST00000565452 AGTR1P30556 359 aa7.99□□□□□ -1.13
VPS9D1-205ENST00000565452 APOBEC3AP31941 199 aaPredicted RBP7.99□□□□□ -1.13
VPS9D1-205ENST00000565452 PIK3CBP42338 1070 aa7.99□□□□□ -1.13
VPS9D1-205ENST00000565452 ETV4P43268 484 aa7.99□□□□□ -1.13
VPS9D1-205ENST00000565452 CHN2P52757 468 aa7.99□□□□□ -1.13
VPS9D1-205ENST00000565452 PNLIPRP2P54317 469 aa7.99□□□□□ -1.13
VPS9D1-205ENST00000565452 DVL1P1P54792 670 aaPredicted RBP7.99□□□□□ -1.13
VPS9D1-205ENST00000565452 GAS1P54826 345 aa7.99□□□□□ -1.13
VPS9D1-205ENST00000565452 PKNOX1P55347 436 aa7.99□□□□□ -1.13
VPS9D1-205ENST00000565452 HILS1P60008 231 aa7.99□□□□□ -1.13
VPS9D1-205ENST00000565452 MAGOHP61326 146 aaKnown RBP7.99□□□□□ -1.13
VPS9D1-205ENST00000565452 PSPHP78330 225 aa7.99□□□□□ -1.13
VPS9D1-205ENST00000565452 PHEXP78562 749 aa7.99□□□□□ -1.13
VPS9D1-205ENST00000565452 GGTA1PQ4G0N0 100 aa7.99□□□□□ -1.13
VPS9D1-205ENST00000565452 UNC50Q53HI1 259 aa7.99□□□□□ -1.13
VPS9D1-205ENST00000565452 TIMM23BQ5SRD1 257 aa7.99□□□□□ -1.13
VPS9D1-205ENST00000565452 PDSS1Q5T2R2 415 aa7.99□□□□□ -1.13
VPS9D1-205ENST00000565452 PRAMEF9Q5VWM5 478 aa7.99□□□□□ -1.13
VPS9D1-205ENST00000565452 MRM1Q6IN84 353 aaKnown RBP7.99□□□□□ -1.13
VPS9D1-205ENST00000565452 GRHL2Q6ISB3 625 aa7.99□□□□□ -1.13
VPS9D1-205ENST00000565452 KLHL17Q6TDP4 642 aa7.99□□□□□ -1.13
VPS9D1-205ENST00000565452 RINLQ6ZS11 566 aa7.99□□□□□ -1.13
VPS9D1-205ENST00000565452 LARP4Q71RC2 724 aaKnown RBP eCLIP7.99□□□□□ -1.13
VPS9D1-205ENST00000565452 GOLGA7Q7Z5G4 137 aa7.99□□□□□ -1.13
VPS9D1-205ENST00000565452 NUDCD3Q8IVD9 361 aa7.99□□□□□ -1.13
VPS9D1-205ENST00000565452 LAS2Q8IYD9 372 aa7.99□□□□□ -1.13
VPS9D1-205ENST00000565452 NUP43Q8NFH3 380 aa7.99□□□□□ -1.13
VPS9D1-205ENST00000565452 OR7G3Q8NG95 312 aa7.99□□□□□ -1.13
VPS9D1-205ENST00000565452 ESAMQ96AP7 390 aa7.99□□□□□ -1.13
VPS9D1-205ENST00000565452 SOX7Q9BT81 388 aa7.99□□□□□ -1.13
VPS9D1-205ENST00000565452 BRINP2Q9C0B6 783 aa7.99□□□□□ -1.13
VPS9D1-205ENST00000565452 NOL11Q9H8H0 719 aaKnown RBP7.99□□□□□ -1.13
VPS9D1-205ENST00000565452 NKIRAS1Q9NYS0 192 aa7.99□□□□□ -1.13
VPS9D1-205ENST00000565452 GPR55Q9Y2T6 319 aaPredicted RBP7.99□□□□□ -1.13
VPS9D1-205ENST00000565452 VWFP04275 2813 aa7.98□□□□□ -1.13
VPS9D1-205ENST00000565452 NPIPA5A0A0B4J1W7 369 aa7.98□□□□□ -1.13
VPS9D1-205ENST00000565452 SERTM1A2A2V5 107 aa7.98□□□□□ -1.13
VPS9D1-205ENST00000565452 LRP5LA4QPB2 252 aa7.98□□□□□ -1.13
VPS9D1-205ENST00000565452 NPIPA7E9PJI5 369 aa7.98□□□□□ -1.13
VPS9D1-205ENST00000565452 FOXE1O00358 373 aaPredicted RBP7.98□□□□□ -1.13
VPS9D1-205ENST00000565452 PLPP1O14494 284 aa7.98□□□□□ -1.13
VPS9D1-205ENST00000565452 CXCL13O43927 109 aa7.98□□□□□ -1.13
VPS9D1-205ENST00000565452 TSPAN2O60636 221 aa7.98□□□□□ -1.13
VPS9D1-205ENST00000565452 RGS9O75916 674 aaPredicted RBP7.98□□□□□ -1.13
VPS9D1-205ENST00000565452 BCAS2O75934 225 aaPredicted RBP7.98□□□□□ -1.13
VPS9D1-205ENST00000565452 NTN1O95631 604 aa7.98□□□□□ -1.13
VPS9D1-205ENST00000565452 ENO1P06733 434 aaKnown RBP7.98□□□□□ -1.13
VPS9D1-205ENST00000565452 NPIPA8P0DM63 369 aa7.98□□□□□ -1.13
VPS9D1-205ENST00000565452 CPMP14384 443 aa7.98□□□□□ -1.13
VPS9D1-205ENST00000565452 EPORP19235 508 aa7.98□□□□□ -1.13
VPS9D1-205ENST00000565452 APEX1P27695 318 aaKnown RBP7.98□□□□□ -1.13
VPS9D1-205ENST00000565452 CLK3P49761 638 aaKnown RBP7.98□□□□□ -1.13
VPS9D1-205ENST00000565452 ARFIP2P53365 341 aa7.98□□□□□ -1.13
VPS9D1-205ENST00000565452 CARD18P57730 90 aa7.98□□□□□ -1.13
VPS9D1-205ENST00000565452 LCP2Q13094 533 aa7.98□□□□□ -1.13
VPS9D1-205ENST00000565452 PCLAFQ15004 111 aa7.98□□□□□ -1.13
VPS9D1-205ENST00000565452 EXOSC7Q15024 291 aaKnown RBP7.98□□□□□ -1.13
VPS9D1-205ENST00000565452 RNPS1Q15287 305 aaKnown RBP7.98□□□□□ -1.13
VPS9D1-205ENST00000565452 OCLNQ16625 522 aa7.98□□□□□ -1.13
VPS9D1-205ENST00000565452 FBLN7Q53RD9 439 aa7.98□□□□□ -1.13
VPS9D1-205ENST00000565452 HSP90B2PQ58FF3 399 aa7.98□□□□□ -1.13
VPS9D1-205ENST00000565452 HHATQ5VTY9 493 aa7.98□□□□□ -1.13
VPS9D1-205ENST00000565452 SHQ1Q6PI26 577 aaKnown RBP7.98□□□□□ -1.13
VPS9D1-205ENST00000565452 TFAP2EQ6VUC0 442 aa7.98□□□□□ -1.13
VPS9D1-205ENST00000565452 GALNT10Q86SR1 603 aa7.98□□□□□ -1.13
VPS9D1-205ENST00000565452 GGNQ86UU5 652 aa7.98□□□□□ -1.13
VPS9D1-205ENST00000565452 C10orf107Q8IVU9 208 aa7.98□□□□□ -1.13
VPS9D1-205ENST00000565452 TEX29Q8N6K0 151 aa7.98□□□□□ -1.13
VPS9D1-205ENST00000565452 OR10D3Q8NH80 312 aa7.98□□□□□ -1.13
VPS9D1-205ENST00000565452 DUSP19Q8WTR2 217 aa7.98□□□□□ -1.13
VPS9D1-205ENST00000565452 ZNF382Q96SR6 550 aa7.98□□□□□ -1.13
VPS9D1-205ENST00000565452 INPP5KQ9BT40 448 aa7.98□□□□□ -1.13
VPS9D1-205ENST00000565452 DDX31Q9H8H2 851 aaKnown RBP7.98□□□□□ -1.13
VPS9D1-205ENST00000565452 ZBTB26Q9HCK0 441 aa7.98□□□□□ -1.13
VPS9D1-205ENST00000565452 MYNNQ9NPC7 610 aa7.98□□□□□ -1.13
VPS9D1-205ENST00000565452 MED4Q9NPJ6 270 aa7.98□□□□□ -1.13
VPS9D1-205ENST00000565452 PFDN4Q9NQP4 134 aa7.98□□□□□ -1.13
VPS9D1-205ENST00000565452 NMRK1Q9NWW6 199 aa7.98□□□□□ -1.13
VPS9D1-205ENST00000565452 SLC17A7Q9P2U7 560 aa7.98□□□□□ -1.13
VPS9D1-205ENST00000565452 SNX6Q9UNH7 406 aa7.98□□□□□ -1.13
VPS9D1-205ENST00000565452 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.98□□□□□ -1.13
VPS9D1-205ENST00000565452 WNK1Q9H4A3 2382 aa7.98□□□□□ -1.13
VPS9D1-205ENST00000565452 A0A0A6YYD5 115 aa7.97□□□□□ -1.13
VPS9D1-205ENST00000565452 A0A1W2PS29 197 aa7.97□□□□□ -1.13
VPS9D1-205ENST00000565452 TMEM120BA0PK00 339 aa7.97□□□□□ -1.13
VPS9D1-205ENST00000565452 OR7A17O14581 309 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms