RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 REEP3Q6NUK4 255 aa14.51□□□□□ -0.09
RAB40C-208ENST00000564703 ZNF585AQ6P3V2 769 aa14.51□□□□□ -0.09
RAB40C-208ENST00000564703 MTFR2Q6P444 385 aa14.51□□□□□ -0.09
RAB40C-208ENST00000564703 FJX1Q86VR8 437 aa14.51□□□□□ -0.09
RAB40C-208ENST00000564703 KRT73Q86Y46 540 aa14.51□□□□□ -0.09
RAB40C-208ENST00000564703 DOLPP1Q86YN1 238 aa14.51□□□□□ -0.09
RAB40C-208ENST00000564703 CMIPQ8IY22 773 aa14.51□□□□□ -0.09
RAB40C-208ENST00000564703 PM20D2Q8IYS1 436 aa14.51□□□□□ -0.09
RAB40C-208ENST00000564703 FAM26EQ8N5C1 309 aa14.51□□□□□ -0.09
RAB40C-208ENST00000564703 ANKS4BQ8N8V4 417 aa14.51□□□□□ -0.09
RAB40C-208ENST00000564703 OR5M9Q8NGP3 310 aa14.51□□□□□ -0.09
RAB40C-208ENST00000564703 RELTQ969Z4 430 aa14.51□□□□□ -0.09
RAB40C-208ENST00000564703 TMEM19Q96HH6 336 aa14.51□□□□□ -0.09
RAB40C-208ENST00000564703 TIMP4Q99727 224 aa14.51□□□□□ -0.09
RAB40C-208ENST00000564703 TREX2Q9BQ50 279 aaPredicted RBP14.51□□□□□ -0.09
RAB40C-208ENST00000564703 CPPED1Q9BRF8 314 aaPredicted RBP14.51□□□□□ -0.09
RAB40C-208ENST00000564703 LAT2Q9GZY6 243 aa14.51□□□□□ -0.09
RAB40C-208ENST00000564703 TP63Q9H3D4 680 aaPredicted RBP14.51□□□□□ -0.09
RAB40C-208ENST00000564703 NANOGQ9H9S0 305 aa14.51□□□□□ -0.09
RAB40C-208ENST00000564703 KCNE5Q9UJ90 142 aa14.51□□□□□ -0.09
RAB40C-208ENST00000564703 TINAGQ9UJW2 476 aa14.51□□□□□ -0.09
RAB40C-208ENST00000564703 IFT52Q9Y366 437 aa14.51□□□□□ -0.09
RAB40C-208ENST00000564703 PCNX3Q9H6A9 2034 aa14.51□□□□□ -0.09
RAB40C-208ENST00000564703 MYO7BQ6PIF6 2116 aa14.5□□□□□ -0.09
RAB40C-208ENST00000564703 FIGNL2A6NMB9 653 aa14.5□□□□□ -0.09
RAB40C-208ENST00000564703 C17orf51A8MQB3 221 aa14.5□□□□□ -0.09
RAB40C-208ENST00000564703 AHRRA9YTQ3 701 aa14.5□□□□□ -0.09
RAB40C-208ENST00000564703 HOXD4P09016 255 aaPredicted RBP14.5□□□□□ -0.09
RAB40C-208ENST00000564703 UBTFL6P0CB48 400 aaPredicted RBP14.5□□□□□ -0.09
RAB40C-208ENST00000564703 GABRA1P14867 456 aa14.5□□□□□ -0.09
RAB40C-208ENST00000564703 CHMP24386 653 aa14.5□□□□□ -0.09
RAB40C-208ENST00000564703 RNF144AP50876 292 aaPredicted RBP14.5□□□□□ -0.09
RAB40C-208ENST00000564703 CCR4P51679 360 aa14.5□□□□□ -0.09
RAB40C-208ENST00000564703 MTPNP58546 118 aa14.5□□□□□ -0.09
RAB40C-208ENST00000564703 ZNF117Q03924 483 aa14.5□□□□□ -0.09
RAB40C-208ENST00000564703 CBFBQ13951 182 aa14.5□□□□□ -0.09
RAB40C-208ENST00000564703 FGFBP1Q14512 234 aa14.5□□□□□ -0.09
RAB40C-208ENST00000564703 MAPK14Q16539 360 aa14.5□□□□□ -0.09
RAB40C-208ENST00000564703 NHSL2Q5HYW2 709 aa14.5□□□□□ -0.09
RAB40C-208ENST00000564703 VASNQ6EMK4 673 aa14.5□□□□□ -0.09
RAB40C-208ENST00000564703 TMEM211Q6ICI0 200 aa14.5□□□□□ -0.09
RAB40C-208ENST00000564703 CHMP1BQ7LBR1 199 aa14.5□□□□□ -0.09
RAB40C-208ENST00000564703 FGD2Q7Z6J4 655 aa14.5□□□□□ -0.09
RAB40C-208ENST00000564703 CD163Q86VB7 1156 aa14.5□□□□□ -0.09
RAB40C-208ENST00000564703 C11orf65Q8NCR3 313 aa14.5□□□□□ -0.09
RAB40C-208ENST00000564703 OR8J3Q8NGG0 315 aa14.5□□□□□ -0.09
RAB40C-208ENST00000564703 OR52P1PQ8NH57 321 aa14.5□□□□□ -0.09
RAB40C-208ENST00000564703 OR5W2Q8NH69 310 aa14.5□□□□□ -0.09
RAB40C-208ENST00000564703 NFKBIDQ8NI38 313 aa14.5□□□□□ -0.09
RAB40C-208ENST00000564703 BBS10Q8TAM1 723 aa14.5□□□□□ -0.09
RAB40C-208ENST00000564703 WDR60Q8WVS4 1066 aa14.5□□□□□ -0.09
RAB40C-208ENST00000564703 MAL2Q969L2 176 aa14.5□□□□□ -0.09
RAB40C-208ENST00000564703 RCN3Q96D15 328 aa14.5□□□□□ -0.09
RAB40C-208ENST00000564703 ZNF607Q96SK3 696 aa14.5□□□□□ -0.09
RAB40C-208ENST00000564703 SPATA5L1Q9BVQ7 753 aa14.5□□□□□ -0.09
RAB40C-208ENST00000564703 QRSL1Q9H0R6 528 aaKnown RBP14.5□□□□□ -0.09
RAB40C-208ENST00000564703 MYLK2Q9H1R3 596 aa14.5□□□□□ -0.09
RAB40C-208ENST00000564703 TMEM38AQ9H6F2 299 aa14.5□□□□□ -0.09
RAB40C-208ENST00000564703 TNFRSF10DQ9UBN6 386 aa14.5□□□□□ -0.09
RAB40C-208ENST00000564703 VDAC3Q9Y277 283 aa14.5□□□□□ -0.09
RAB40C-208ENST00000564703 HRH3Q9Y5N1 445 aa14.5□□□□□ -0.09
RAB40C-208ENST00000564703 FASNP49327 2511 aaKnown RBP14.5□□□□□ -0.09
RAB40C-208ENST00000564703 ADAM10O14672 748 aa14.49□□□□□ -0.09
RAB40C-208ENST00000564703 SHOX2O60902 331 aaPredicted RBP14.49□□□□□ -0.09
RAB40C-208ENST00000564703 WDR1O75083 606 aa14.49□□□□□ -0.09
RAB40C-208ENST00000564703 SERPINB7O75635 380 aa14.49□□□□□ -0.09
RAB40C-208ENST00000564703 PGM3O95394 542 aa14.49□□□□□ -0.09
RAB40C-208ENST00000564703 ZIC2O95409 532 aaPredicted RBP14.49□□□□□ -0.09
RAB40C-208ENST00000564703 ARAFP10398 606 aa14.49□□□□□ -0.09
RAB40C-208ENST00000564703 PGCP20142 388 aa14.49□□□□□ -0.09
RAB40C-208ENST00000564703 PRDX6P30041 224 aa14.49□□□□□ -0.09
RAB40C-208ENST00000564703 EIF1P41567 113 aaKnown RBP14.49□□□□□ -0.09
RAB40C-208ENST00000564703 RBBP4Q09028 425 aa14.49□□□□□ -0.09
RAB40C-208ENST00000564703 SCARB2Q14108 478 aa14.49□□□□□ -0.09
RAB40C-208ENST00000564703 ZSWIM7Q19AV6 140 aa14.49□□□□□ -0.09
RAB40C-208ENST00000564703 CBLN3Q6UW01 205 aa14.49□□□□□ -0.09
RAB40C-208ENST00000564703 ARSKQ6UWY0 536 aa14.49□□□□□ -0.09
RAB40C-208ENST00000564703 HMGN2P46Q86SG4 172 aa14.49□□□□□ -0.09
RAB40C-208ENST00000564703 CHERPQ8IWX8 916 aaKnown RBP14.49□□□□□ -0.09
RAB40C-208ENST00000564703 CCDC197Q8NCU1 140 aa14.49□□□□□ -0.09
RAB40C-208ENST00000564703 OR10A6Q8NH74 314 aa14.49□□□□□ -0.09
RAB40C-208ENST00000564703 ZBTB8AQ96BR9 441 aa14.49□□□□□ -0.09
RAB40C-208ENST00000564703 HOPXQ9BPY8 73 aaPredicted RBP14.49□□□□□ -0.09
RAB40C-208ENST00000564703 UGT2B28Q9BY64 529 aa14.49□□□□□ -0.09
RAB40C-208ENST00000564703 IKZF5Q9H5V7 419 aa14.49□□□□□ -0.09
RAB40C-208ENST00000564703 RUBCNLQ9H714 662 aa14.49□□□□□ -0.09
RAB40C-208ENST00000564703 BCL2L10Q9HD36 194 aa14.49□□□□□ -0.09
RAB40C-208ENST00000564703 PNPLA3Q9NST1 481 aa14.49□□□□□ -0.09
RAB40C-208ENST00000564703 SPRR3Q9UBC9 169 aa14.49□□□□□ -0.09
RAB40C-208ENST00000564703 ICAM5Q9UMF0 924 aa14.49□□□□□ -0.09
RAB40C-208ENST00000564703 CAMK2AQ9UQM7 478 aa14.49□□□□□ -0.09
RAB40C-208ENST00000564703 ANGPT4Q9Y264 503 aa14.49□□□□□ -0.09
RAB40C-208ENST00000564703 AP3M1Q9Y2T2 418 aa14.49□□□□□ -0.09
RAB40C-208ENST00000564703 L3MBTL1Q9Y468 752 aa14.49□□□□□ -0.09
RAB40C-208ENST00000564703 SMG1Q96Q15 3661 aaKnown RBP14.48□□□□□ -0.09
RAB40C-208ENST00000564703 E9PLN8 166 aa14.48□□□□□ -0.09
RAB40C-208ENST00000564703 PEPDP12955 493 aa14.48□□□□□ -0.09
RAB40C-208ENST00000564703 NID1P14543 1247 aa14.48□□□□□ -0.09
RAB40C-208ENST00000564703 ETS2P15036 469 aa14.48□□□□□ -0.09
RAB40C-208ENST00000564703 PTGER4P35408 488 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms