RNA–Protein interactions for RNA: ENST00000564582.2

CHD9-210, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-210ENST00000564582 FABP1P07148 127 aa5.2□□□□□ -1.58
CHD9-210ENST00000564582 HIST1H2AGP0C0S8 130 aaPredicted RBP5.2□□□□□ -1.58
CHD9-210ENST00000564582 SLC2A1P11166 492 aa5.2□□□□□ -1.58
CHD9-210ENST00000564582 CYP4B1P13584 511 aa5.2□□□□□ -1.58
CHD9-210ENST00000564582 WT1P19544 449 aaPredicted RBP5.2□□□□□ -1.58
CHD9-210ENST00000564582 PVALBP20472 110 aaPredicted RBP5.2□□□□□ -1.58
CHD9-210ENST00000564582 HIST1H2ADP20671 130 aa5.2□□□□□ -1.58
CHD9-210ENST00000564582 CCND3P30281 292 aaPredicted RBP5.2□□□□□ -1.58
CHD9-210ENST00000564582 FAUP35544 74 aaKnown RBP5.2□□□□□ -1.58
CHD9-210ENST00000564582 CD79BP40259 229 aa5.2□□□□□ -1.58
CHD9-210ENST00000564582 RFC3P40938 356 aa5.2□□□□□ -1.58
CHD9-210ENST00000564582 TNFSF9P41273 254 aa5.2□□□□□ -1.58
CHD9-210ENST00000564582 PTGER3P43115 390 aa5.2□□□□□ -1.58
CHD9-210ENST00000564582 CENPAP49450 140 aa5.2□□□□□ -1.58
CHD9-210ENST00000564582 MMP15P51511 669 aa5.2□□□□□ -1.58
CHD9-210ENST00000564582 PNLIPRP1P54315 467 aa5.2□□□□□ -1.58
CHD9-210ENST00000564582 CDH4P55283 916 aa5.2□□□□□ -1.58
CHD9-210ENST00000564582 CTBP2P56545 445 aa5.2□□□□□ -1.58
CHD9-210ENST00000564582 TAS2R43P59537 309 aa5.2□□□□□ -1.58
CHD9-210ENST00000564582 NANOS3P60323 173 aaKnown RBP5.2□□□□□ -1.58
CHD9-210ENST00000564582 WDR5P61964 334 aaKnown RBP5.2□□□□□ -1.58
CHD9-210ENST00000564582 RPS14P62263 151 aaKnown RBP5.2□□□□□ -1.58
CHD9-210ENST00000564582 SNRPD2P62316 118 aaKnown RBP5.2□□□□□ -1.58
CHD9-210ENST00000564582 EIF5AP63241 154 aaKnown RBP5.2□□□□□ -1.58
CHD9-210ENST00000564582 RELQ04864 619 aaPredicted RBP5.2□□□□□ -1.58
CHD9-210ENST00000564582 TDGQ13569 410 aa5.2□□□□□ -1.58
CHD9-210ENST00000564582 CDH18Q13634 790 aa5.2□□□□□ -1.58
CHD9-210ENST00000564582 GTF2H2Q13888 395 aa5.2□□□□□ -1.58
CHD9-210ENST00000564582 GK2Q14410 553 aaPredicted RBP5.2□□□□□ -1.58
CHD9-210ENST00000564582 HEPACAMQ14CZ8 416 aa5.2□□□□□ -1.58
CHD9-210ENST00000564582 FCN2Q15485 313 aa5.2□□□□□ -1.58
CHD9-210ENST00000564582 TAF1AQ15573 450 aaPredicted RBP5.2□□□□□ -1.58
CHD9-210ENST00000564582 ZNF630Q2M218 657 aaPredicted RBP5.2□□□□□ -1.58
CHD9-210ENST00000564582 LGALSLQ3ZCW2 172 aaPredicted RBP5.2□□□□□ -1.58
CHD9-210ENST00000564582 IGSF11Q5DX21 431 aa5.2□□□□□ -1.58
CHD9-210ENST00000564582 CARD16Q5EG05 197 aa5.2□□□□□ -1.58
CHD9-210ENST00000564582 ELFN2Q5R3F8 820 aa5.2□□□□□ -1.58
CHD9-210ENST00000564582 AVPI1Q5T686 147 aa5.2□□□□□ -1.58
CHD9-210ENST00000564582 IDNKQ5T6J7 187 aa5.2□□□□□ -1.58
CHD9-210ENST00000564582 HBMQ6B0K9 141 aa5.2□□□□□ -1.58
CHD9-210ENST00000564582 HIST2H2AA3Q6FI13 130 aa5.2□□□□□ -1.58
CHD9-210ENST00000564582 CYB5RLQ6IPT4 315 aa5.2□□□□□ -1.58
CHD9-210ENST00000564582 CDC73Q6P1J9 531 aa5.2□□□□□ -1.58
CHD9-210ENST00000564582 GTF2H2CQ6P1K8 395 aa5.2□□□□□ -1.58
CHD9-210ENST00000564582 C3orf33Q6P1S2 294 aa5.2□□□□□ -1.58
CHD9-210ENST00000564582 ANKRD16Q6P6B7 361 aa5.2□□□□□ -1.58
CHD9-210ENST00000564582 TRIM40Q6P9F5 258 aa5.2□□□□□ -1.58
CHD9-210ENST00000564582 CNIH2Q6PI25 160 aa5.2□□□□□ -1.58
CHD9-210ENST00000564582 HAGHLQ6PII5 290 aaPredicted RBP5.2□□□□□ -1.58
CHD9-210ENST00000564582 NCEH1Q6PIU2 408 aa5.2□□□□□ -1.58
CHD9-210ENST00000564582 FIP1L1Q6UN15 594 aaKnown RBP5.2□□□□□ -1.58
CHD9-210ENST00000564582 METTL7BQ6UX53 244 aa5.2□□□□□ -1.58
CHD9-210ENST00000564582 UNC5DQ6UXZ4 953 aa5.2□□□□□ -1.58
CHD9-210ENST00000564582 WASH2PQ6VEQ5 465 aa5.2□□□□□ -1.58
CHD9-210ENST00000564582 QSOX2Q6ZRP7 698 aa5.2□□□□□ -1.58
CHD9-210ENST00000564582 FAM122BQ7Z309 247 aa5.2□□□□□ -1.58
CHD9-210ENST00000564582 RD3Q7Z3Z2 195 aa5.2□□□□□ -1.58
CHD9-210ENST00000564582 WDR53Q7Z5U6 358 aaPredicted RBP5.2□□□□□ -1.58
CHD9-210ENST00000564582 KRT77Q7Z794 578 aa5.2□□□□□ -1.58
CHD9-210ENST00000564582 TMEM179BQ7Z7N9 219 aa5.2□□□□□ -1.58
CHD9-210ENST00000564582 OAFQ86UD1 273 aa5.2□□□□□ -1.58
CHD9-210ENST00000564582 PRIMA1Q86XR5 153 aa5.2□□□□□ -1.58
CHD9-210ENST00000564582 ZNF280BQ86YH2 543 aa5.2□□□□□ -1.58
CHD9-210ENST00000564582 NKAIN4Q8IVV8 208 aa5.2□□□□□ -1.58
CHD9-210ENST00000564582 MFSD6LQ8IWD5 586 aa5.2□□□□□ -1.58
CHD9-210ENST00000564582 YAF2Q8IY57 180 aa5.2□□□□□ -1.58
CHD9-210ENST00000564582 TOMM5Q8N4H5 51 aa5.2□□□□□ -1.58
CHD9-210ENST00000564582 ZBTB2Q8N680 514 aa5.2□□□□□ -1.58
CHD9-210ENST00000564582 BOLLQ8N9W6 283 aaKnown RBP5.2□□□□□ -1.58
CHD9-210ENST00000564582 ACVR1CQ8NER5 493 aa5.2□□□□□ -1.58
CHD9-210ENST00000564582 OR52K2Q8NGK3 314 aa5.2□□□□□ -1.58
CHD9-210ENST00000564582 OR8D4Q8NGM9 314 aa5.2□□□□□ -1.58
CHD9-210ENST00000564582 OR5M9Q8NGP3 310 aa5.2□□□□□ -1.58
CHD9-210ENST00000564582 OR2T35Q8NGX2 323 aa5.2□□□□□ -1.58
CHD9-210ENST00000564582 FAM110BQ8TC76 370 aa5.2□□□□□ -1.58
CHD9-210ENST00000564582 SMAP2Q8WU79 429 aaPredicted RBP5.2□□□□□ -1.58
CHD9-210ENST00000564582 UBTD2Q8WUN7 234 aa5.2□□□□□ -1.58
CHD9-210ENST00000564582 PIH1D2Q8WWB5 315 aa5.2□□□□□ -1.58
CHD9-210ENST00000564582 NSMAFQ92636 917 aa5.2□□□□□ -1.58
CHD9-210ENST00000564582 IMP4Q96G21 291 aaKnown RBP5.2□□□□□ -1.58
CHD9-210ENST00000564582 NARS2Q96I59 477 aaKnown RBP5.2□□□□□ -1.58
CHD9-210ENST00000564582 C7orf34Q96L11 122 aa5.2□□□□□ -1.58
CHD9-210ENST00000564582 FEVQ99581 238 aa5.2□□□□□ -1.58
CHD9-210ENST00000564582 PIP5K1AQ99755 562 aa5.2□□□□□ -1.58
CHD9-210ENST00000564582 CCM2Q9BSQ5 444 aa5.2□□□□□ -1.58
CHD9-210ENST00000564582 POLDIP3Q9BY77 421 aaKnown RBP5.2□□□□□ -1.58
CHD9-210ENST00000564582 REG4Q9BYZ8 158 aa5.2□□□□□ -1.58
CHD9-210ENST00000564582 SPRTNQ9H040 489 aaPredicted RBP5.2□□□□□ -1.58
CHD9-210ENST00000564582 CDT1Q9H211 546 aa5.2□□□□□ -1.58
CHD9-210ENST00000564582 SAV1Q9H4B6 383 aaPredicted RBP5.2□□□□□ -1.58
CHD9-210ENST00000564582 C11orf49Q9H6J7 331 aa5.2□□□□□ -1.58
CHD9-210ENST00000564582 CXorf36Q9H7Y0 433 aa5.2□□□□□ -1.58
CHD9-210ENST00000564582 CACYBPQ9HB71 228 aaKnown RBP5.2□□□□□ -1.58
CHD9-210ENST00000564582 FGF20Q9NP95 211 aaPredicted RBP5.2□□□□□ -1.58
CHD9-210ENST00000564582 SLC35C2Q9NQQ7 365 aa5.2□□□□□ -1.58
CHD9-210ENST00000564582 INPP5EQ9NRR6 644 aa5.2□□□□□ -1.58
CHD9-210ENST00000564582 SEMA4GQ9NTN9 838 aa5.2□□□□□ -1.58
CHD9-210ENST00000564582 SERTAD4Q9NUC0 356 aa5.2□□□□□ -1.58
CHD9-210ENST00000564582 MED17Q9NVC6 651 aa5.2□□□□□ -1.58
CHD9-210ENST00000564582 RBM22Q9NW64 420 aaKnown RBP eCLIP5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms