RNA–Protein interactions for RNA: ENST00000564578.5

KARS-204, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5

Gene KARS, Length 1,942 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-204ENST00000564578 B8ZZF3 427 aa11.35□□□□□ -0.59
KARS-204ENST00000564578 M0QX08 132 aa11.35□□□□□ -0.59
KARS-204ENST00000564578 TPST1O60507 370 aa11.35□□□□□ -0.59
KARS-204ENST00000564578 CBR3O75828 277 aa11.35□□□□□ -0.59
KARS-204ENST00000564578 MFN2O95140 757 aa11.35□□□□□ -0.59
KARS-204ENST00000564578 EPPINO95925 133 aa11.35□□□□□ -0.59
KARS-204ENST00000564578 DBIP07108 87 aaKnown RBP11.35□□□□□ -0.59
KARS-204ENST00000564578 PABPC4LP0CB38 370 aaKnown RBP11.35□□□□□ -0.59
KARS-204ENST00000564578 EEF1A1P68104 462 aaKnown RBP11.35□□□□□ -0.59
KARS-204ENST00000564578 CEACAM7Q14002 265 aa11.35□□□□□ -0.59
KARS-204ENST00000564578 CCDC80Q76M96 950 aa11.35□□□□□ -0.59
KARS-204ENST00000564578 MISPQ8IVT2 679 aa11.35□□□□□ -0.59
KARS-204ENST00000564578 MICU2Q8IYU8 434 aa11.35□□□□□ -0.59
KARS-204ENST00000564578 CLIP4Q8N3C7 705 aa11.35□□□□□ -0.59
KARS-204ENST00000564578 FAM156AQ8NDB6 213 aa11.35□□□□□ -0.59
KARS-204ENST00000564578 NR4A3Q92570 626 aa11.35□□□□□ -0.59
KARS-204ENST00000564578 ARSGQ96EG1 525 aa11.35□□□□□ -0.59
KARS-204ENST00000564578 SH3YL1Q96HL8 342 aaPredicted RBP11.35□□□□□ -0.59
KARS-204ENST00000564578 DSN1Q9H410 356 aa11.35□□□□□ -0.59
KARS-204ENST00000564578 NDE1Q9NXR1 346 aa11.35□□□□□ -0.59
KARS-204ENST00000564578 PPP4R1LQ9P1A2 415 aa11.35□□□□□ -0.59
KARS-204ENST00000564578 POLEQ07864 2286 aa11.34□□□□□ -0.59
KARS-204ENST00000564578 CDHR4A6H8M9 788 aa11.34□□□□□ -0.59
KARS-204ENST00000564578 TMEM229AB2RXF0 380 aa11.34□□□□□ -0.59
KARS-204ENST00000564578 H3BNH8 94 aa11.34□□□□□ -0.59
KARS-204ENST00000564578 HCRTR2O43614 444 aa11.34□□□□□ -0.59
KARS-204ENST00000564578 GMFGO60234 142 aa11.34□□□□□ -0.59
KARS-204ENST00000564578 ZIC3O60481 467 aa11.34□□□□□ -0.59
KARS-204ENST00000564578 CSTAP01040 98 aa11.34□□□□□ -0.59
KARS-204ENST00000564578 THBS1P07996 1170 aa11.34□□□□□ -0.59
KARS-204ENST00000564578 UBTFL6P0CB48 400 aaPredicted RBP11.34□□□□□ -0.59
KARS-204ENST00000564578 MSX2P35548 267 aaPredicted RBP11.34□□□□□ -0.59
KARS-204ENST00000564578 TDGF1P3P51864 188 aa11.34□□□□□ -0.59
KARS-204ENST00000564578 PLGLB1Q02325 96 aa11.34□□□□□ -0.59
KARS-204ENST00000564578 SKP2Q13309 424 aa11.34□□□□□ -0.59
KARS-204ENST00000564578 FXNQ16595 210 aa11.34□□□□□ -0.59
KARS-204ENST00000564578 MRPL2Q5T653 305 aaKnown RBP11.34□□□□□ -0.59
KARS-204ENST00000564578 ERICH5Q6P6B1 374 aa11.34□□□□□ -0.59
KARS-204ENST00000564578 FAM180AQ6UWF9 173 aa11.34□□□□□ -0.59
KARS-204ENST00000564578 BNC2Q6ZN30 1099 aaPredicted RBP11.34□□□□□ -0.59
KARS-204ENST00000564578 ZNF836Q6ZNA1 936 aa11.34□□□□□ -0.59
KARS-204ENST00000564578 EIF3MQ7L2H7 374 aaKnown RBP11.34□□□□□ -0.59
KARS-204ENST00000564578 SLC22A16Q86VW1 577 aa11.34□□□□□ -0.59
KARS-204ENST00000564578 FAM109AQ8N4B1 249 aa11.34□□□□□ -0.59
KARS-204ENST00000564578 CNOT9Q92600 299 aaKnown RBP11.34□□□□□ -0.59
KARS-204ENST00000564578 SLX1AQ9BQ83 275 aa11.34□□□□□ -0.59
KARS-204ENST00000564578 ANGPT4Q9Y264 503 aa11.34□□□□□ -0.59
KARS-204ENST00000564578 ZNF443Q9Y2A4 671 aaPredicted RBP11.34□□□□□ -0.59
KARS-204ENST00000564578 ZNF264O43296 627 aa11.33□□□□□ -0.6
KARS-204ENST00000564578 DNAJA2O60884 412 aa11.33□□□□□ -0.6
KARS-204ENST00000564578 WISP1O95388 367 aa11.33□□□□□ -0.6
KARS-204ENST00000564578 CRYABP02511 175 aaKnown RBP11.33□□□□□ -0.6
KARS-204ENST00000564578 OPN1SWP03999 348 aa11.33□□□□□ -0.6
KARS-204ENST00000564578 UBL4AP11441 157 aa11.33□□□□□ -0.6
KARS-204ENST00000564578 HSD17B1P14061 328 aa11.33□□□□□ -0.6
KARS-204ENST00000564578 TCN1P20061 433 aaPredicted RBP11.33□□□□□ -0.6
KARS-204ENST00000564578 FOXK1P85037 733 aa11.33□□□□□ -0.6
KARS-204ENST00000564578 ALDH6A1Q02252 535 aaKnown RBP11.33□□□□□ -0.6
KARS-204ENST00000564578 DUSP7Q16829 419 aa11.33□□□□□ -0.6
KARS-204ENST00000564578 ZNF311Q5JNZ3 666 aa11.33□□□□□ -0.6
KARS-204ENST00000564578 RNF220Q5VTB9 566 aa11.33□□□□□ -0.6
KARS-204ENST00000564578 ARSKQ6UWY0 536 aa11.33□□□□□ -0.6
KARS-204ENST00000564578 SLC30A8Q8IWU4 369 aa11.33□□□□□ -0.6
KARS-204ENST00000564578 CMIPQ8IY22 773 aa11.33□□□□□ -0.6
KARS-204ENST00000564578 CPT1CQ8TCG5 803 aa11.33□□□□□ -0.6
KARS-204ENST00000564578 WDR60Q8WVS4 1066 aa11.33□□□□□ -0.6
KARS-204ENST00000564578 TAMM41Q96BW9 452 aa11.33□□□□□ -0.6
KARS-204ENST00000564578 NPAS1Q99742 590 aa11.33□□□□□ -0.6
KARS-204ENST00000564578 KCTD14Q9BQ13 255 aaPredicted RBP11.33□□□□□ -0.6
KARS-204ENST00000564578 WFDC6Q9BQY6 131 aa11.33□□□□□ -0.6
KARS-204ENST00000564578 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.33□□□□□ -0.6
KARS-204ENST00000564578 OLAHQ9NV23 265 aa11.33□□□□□ -0.6
KARS-204ENST00000564578 DNAJB12Q9NXW2 375 aaKnown RBP11.33□□□□□ -0.6
KARS-204ENST00000564578 IFT52Q9Y366 437 aa11.33□□□□□ -0.6
KARS-204ENST00000564578 NPIPA5E9PKD4 350 aa11.33□□□□□ -0.6
KARS-204ENST00000564578 ACOT7O00154 380 aa11.33□□□□□ -0.6
KARS-204ENST00000564578 GTPBP1O00178 669 aaKnown RBP11.33□□□□□ -0.6
KARS-204ENST00000564578 TFECO14948 347 aaPredicted RBP11.33□□□□□ -0.6
KARS-204ENST00000564578 EIF4E2O60573 245 aaKnown RBP11.33□□□□□ -0.6
KARS-204ENST00000564578 HPNP05981 417 aa11.33□□□□□ -0.6
KARS-204ENST00000564578 GDF1P27539 372 aa11.33□□□□□ -0.6
KARS-204ENST00000564578 HTR1EP28566 365 aa11.33□□□□□ -0.6
KARS-204ENST00000564578 KDELR2P33947 212 aa11.33□□□□□ -0.6
KARS-204ENST00000564578 LIN52Q52LA3 116 aa11.33□□□□□ -0.6
KARS-204ENST00000564578 SAMD4BQ5PRF9 694 aaKnown RBP11.33□□□□□ -0.6
KARS-204ENST00000564578 INTS11Q5TA45 600 aaKnown RBP11.33□□□□□ -0.6
KARS-204ENST00000564578 KRT73Q86Y46 540 aa11.33□□□□□ -0.6
KARS-204ENST00000564578 GRAMD2AQ8IUY3 354 aa11.33□□□□□ -0.6
KARS-204ENST00000564578 CHERPQ8IWX8 916 aaKnown RBP11.33□□□□□ -0.6
KARS-204ENST00000564578 SMYD1Q8NB12 490 aa11.33□□□□□ -0.6
KARS-204ENST00000564578 GPR32P1Q8NGA4 272 aa11.33□□□□□ -0.6
KARS-204ENST00000564578 B4GALNT2Q8NHY0 566 aa11.33□□□□□ -0.6
KARS-204ENST00000564578 C1GALT1C1Q96EU7 318 aa11.33□□□□□ -0.6
KARS-204ENST00000564578 ZNF607Q96SK3 696 aa11.33□□□□□ -0.6
KARS-204ENST00000564578 LAT2Q9GZY6 243 aa11.33□□□□□ -0.6
KARS-204ENST00000564578 DEFB127Q9H1M4 99 aa11.33□□□□□ -0.6
KARS-204ENST00000564578 ACKR4Q9NPB9 350 aa11.33□□□□□ -0.6
KARS-204ENST00000564578 PLSCR2Q9NRY7 297 aa11.33□□□□□ -0.6
KARS-204ENST00000564578 QPCTLQ9NXS2 382 aa11.33□□□□□ -0.6
KARS-204ENST00000564578 EGFL7Q9UHF1 273 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms