RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 APMAPQ9HDC9 416 aa2.84□□□□□ -1.95
UBR1-205ENST00000564540 PAK1IP1Q9NWT1 392 aaPredicted RBP2.84□□□□□ -1.95
UBR1-205ENST00000564540 P2RX2Q9UBL9 471 aa2.84□□□□□ -1.95
UBR1-205ENST00000564540 BLOC1S6Q9UL45 172 aa2.84□□□□□ -1.95
UBR1-205ENST00000564540 WDR45Q9Y484 360 aa2.84□□□□□ -1.95
UBR1-205ENST00000564540 MAB21L2Q9Y586 359 aa2.84□□□□□ -1.95
UBR1-205ENST00000564540 CDH10Q9Y6N8 788 aa2.84□□□□□ -1.95
UBR1-205ENST00000564540 THSD7BQ9C0I4 1608 aa2.83□□□□□ -1.96
UBR1-205ENST00000564540 TRBV6-6A0A0A6YYG2 114 aa2.83□□□□□ -1.96
UBR1-205ENST00000564540 KRT87PA6NCN2 255 aa2.83□□□□□ -1.96
UBR1-205ENST00000564540 E9PMD0 336 aa2.83□□□□□ -1.96
UBR1-205ENST00000564540 SGK494L7N484 410 aa2.83□□□□□ -1.96
UBR1-205ENST00000564540 NPIPB7O75200 414 aa2.83□□□□□ -1.96
UBR1-205ENST00000564540 MAPK3P27361 379 aaPredicted RBP2.83□□□□□ -1.96
UBR1-205ENST00000564540 NUDT1P36639 197 aa2.83□□□□□ -1.96
UBR1-205ENST00000564540 POLR2FP61218 127 aaKnown RBP2.83□□□□□ -1.96
UBR1-205ENST00000564540 GPNMBQ14956 572 aa2.83□□□□□ -1.96
UBR1-205ENST00000564540 CFAP221Q4G0U5 840 aa2.83□□□□□ -1.96
UBR1-205ENST00000564540 WDR88Q6ZMY6 472 aa2.83□□□□□ -1.96
UBR1-205ENST00000564540 FAM220AQ7Z4H9 259 aa2.83□□□□□ -1.96
UBR1-205ENST00000564540 TAF8Q7Z7C8 310 aa2.83□□□□□ -1.96
UBR1-205ENST00000564540 LCA5Q86VQ0 697 aa2.83□□□□□ -1.96
UBR1-205ENST00000564540 OR9A1PQ8NGU1 263 aa2.83□□□□□ -1.96
UBR1-205ENST00000564540 MARCH1Q8TCQ1 289 aa2.83□□□□□ -1.96
UBR1-205ENST00000564540 MBOAT4Q96T53 435 aa2.83□□□□□ -1.96
UBR1-205ENST00000564540 WRAP53Q9BUR4 548 aaKnown RBP2.83□□□□□ -1.96
UBR1-205ENST00000564540 NFKBIZQ9BYH8 718 aa2.83□□□□□ -1.96
UBR1-205ENST00000564540 COMMD4Q9H0A8 199 aa2.83□□□□□ -1.96
UBR1-205ENST00000564540 MMP26Q9NRE1 261 aa2.83□□□□□ -1.96
UBR1-205ENST00000564540 C1orf123Q9NWV4 160 aa2.83□□□□□ -1.96
UBR1-205ENST00000564540 KCNN3Q9UGI6 736 aa2.83□□□□□ -1.96
UBR1-205ENST00000564540 ATP6V0A2Q9Y487 856 aa2.83□□□□□ -1.96
UBR1-205ENST00000564540 PSMB11A5LHX3 300 aa2.82□□□□□ -1.96
UBR1-205ENST00000564540 EFNA2O43921 213 aa2.82□□□□□ -1.96
UBR1-205ENST00000564540 BCAS2O75934 225 aaPredicted RBP2.82□□□□□ -1.96
UBR1-205ENST00000564540 HTR1FP30939 366 aa2.82□□□□□ -1.96
UBR1-205ENST00000564540 HSPA1LP34931 641 aa2.82□□□□□ -1.96
UBR1-205ENST00000564540 APOC4P55056 127 aa2.82□□□□□ -1.96
UBR1-205ENST00000564540 OR8G2PQ6IF36 304 aa2.82□□□□□ -1.96
UBR1-205ENST00000564540 ETFRF1Q6IPR1 90 aa2.82□□□□□ -1.96
UBR1-205ENST00000564540 DNM1P46Q6ZS02 220 aa2.82□□□□□ -1.96
UBR1-205ENST00000564540 RABEPKQ7Z6M1 372 aa2.82□□□□□ -1.96
UBR1-205ENST00000564540 NEIL3Q8TAT5 605 aa2.82□□□□□ -1.96
UBR1-205ENST00000564540 SPXQ9BT56 116 aa2.82□□□□□ -1.96
UBR1-205ENST00000564540 RNF126Q9BV68 326 aa2.82□□□□□ -1.96
UBR1-205ENST00000564540 POLR3FQ9H1D9 316 aaPredicted RBP2.82□□□□□ -1.96
UBR1-205ENST00000564540 SLC25A51Q9H1U9 297 aa2.82□□□□□ -1.96
UBR1-205ENST00000564540 FETUBQ9UGM5 382 aa2.82□□□□□ -1.96
UBR1-205ENST00000564540 TBK1Q9UHD2 729 aa2.82□□□□□ -1.96
UBR1-205ENST00000564540 XPO7Q9UIA9 1087 aaKnown RBP2.82□□□□□ -1.96
UBR1-205ENST00000564540 SMC3Q9UQE7 1217 aa2.82□□□□□ -1.96
UBR1-205ENST00000564540 EIF3LQ9Y262 564 aaKnown RBP2.82□□□□□ -1.96
UBR1-205ENST00000564540 IGKV2D-24A0A075B6R9 120 aa2.81□□□□□ -1.96
UBR1-205ENST00000564540 LOC100131303A0A0U1RQF7 123 aa2.81□□□□□ -1.96
UBR1-205ENST00000564540 ZNF705EA8MWA4 302 aaPredicted RBP2.81□□□□□ -1.96
UBR1-205ENST00000564540 PRPSAP2O60256 369 aa2.81□□□□□ -1.96
UBR1-205ENST00000564540 GUCA1CO95843 209 aa2.81□□□□□ -1.96
UBR1-205ENST00000564540 IGHV4-34P06331 123 aa2.81□□□□□ -1.96
UBR1-205ENST00000564540 BCKDHAP12694 445 aa2.81□□□□□ -1.96
UBR1-205ENST00000564540 RPS2P15880 293 aaKnown RBP2.81□□□□□ -1.96
UBR1-205ENST00000564540 AHCYP23526 432 aa2.81□□□□□ -1.96
UBR1-205ENST00000564540 UNC119Q13432 240 aa2.81□□□□□ -1.96
UBR1-205ENST00000564540 SNX1Q13596 522 aa2.81□□□□□ -1.96
UBR1-205ENST00000564540 ZSCAN4Q8NAM6 433 aaPredicted RBP2.81□□□□□ -1.96
UBR1-205ENST00000564540 ZNF540Q8NDQ6 660 aa2.81□□□□□ -1.96
UBR1-205ENST00000564540 OR52I1Q8NGK6 324 aa2.81□□□□□ -1.96
UBR1-205ENST00000564540 ARHGDIGQ99819 225 aa2.81□□□□□ -1.96
UBR1-205ENST00000564540 C1orf21Q9H246 121 aa2.81□□□□□ -1.96
UBR1-205ENST00000564540 ZDHHC11Q9H8X9 412 aa2.81□□□□□ -1.96
UBR1-205ENST00000564540 LIN28AQ9H9Z2 209 aaKnown RBP2.81□□□□□ -1.96
UBR1-205ENST00000564540 ANO10Q9NW15 660 aa2.81□□□□□ -1.96
UBR1-205ENST00000564540 NINJ2Q9NZG7 142 aa2.81□□□□□ -1.96
UBR1-205ENST00000564540 CNOT2Q9NZN8 540 aaKnown RBP2.81□□□□□ -1.96
UBR1-205ENST00000564540 SCML2Q9UQR0 700 aa2.81□□□□□ -1.96
UBR1-205ENST00000564540 SPAG9O60271 1321 aaKnown RBP2.81□□□□□ -1.96
UBR1-205ENST00000564540 MTCL1Q9Y4B5 1905 aaKnown RBP2.81□□□□□ -1.96
UBR1-205ENST00000564540 SYCE3A1L190 88 aa2.8□□□□□ -1.96
UBR1-205ENST00000564540 TRIM64CA6NLI5 447 aa2.8□□□□□ -1.96
UBR1-205ENST00000564540 FAM166BA8MTA8 275 aa2.8□□□□□ -1.96
UBR1-205ENST00000564540 AKR7A3O95154 331 aa2.8□□□□□ -1.96
UBR1-205ENST00000564540 INSP01308 110 aa2.8□□□□□ -1.96
UBR1-205ENST00000564540 ANXA4P09525 319 aaPredicted RBP2.8□□□□□ -1.96
UBR1-205ENST00000564540 ZNF44P15621 663 aa2.8□□□□□ -1.96
UBR1-205ENST00000564540 CCNCP24863 283 aa2.8□□□□□ -1.96
UBR1-205ENST00000564540 ADSSP30520 456 aa2.8□□□□□ -1.96
UBR1-205ENST00000564540 OR6B2Q6IFH4 312 aa2.8□□□□□ -1.96
UBR1-205ENST00000564540 LPCAT2Q7L5N7 544 aa2.8□□□□□ -1.96
UBR1-205ENST00000564540 VPS36Q86VN1 386 aa2.8□□□□□ -1.96
UBR1-205ENST00000564540 ZNF740Q8NDX6 193 aa2.8□□□□□ -1.96
UBR1-205ENST00000564540 UPRTQ96BW1 309 aa2.8□□□□□ -1.96
UBR1-205ENST00000564540 CHRDL1Q9BU40 450 aa2.8□□□□□ -1.96
UBR1-205ENST00000564540 RPAP3Q9H6T3 665 aaPredicted RBP2.8□□□□□ -1.96
UBR1-205ENST00000564540 SYTL2Q9HCH5 934 aa2.8□□□□□ -1.96
UBR1-205ENST00000564540 SH2D2AQ9NP31 389 aa2.8□□□□□ -1.96
UBR1-205ENST00000564540 IL19Q9UHD0 177 aa2.8□□□□□ -1.96
UBR1-205ENST00000564540 SH3BGRL2Q9UJC5 107 aa2.8□□□□□ -1.96
UBR1-205ENST00000564540 PLA2G4CQ9UP65 541 aa2.8□□□□□ -1.96
UBR1-205ENST00000564540 PIN4Q9Y237 131 aaKnown RBP2.8□□□□□ -1.96
UBR1-205ENST00000564540 RGSL1A5PLK6 1076 aa2.79□□□□□ -1.96
UBR1-205ENST00000564540 RNF222A6NCQ9 220 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms