RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 DHRSXQ8N5I4 330 aa2.04□□□□□ -2.08
CHD9-209ENST00000564255 STXBP6Q8NFX7 210 aa2.04□□□□□ -2.08
CHD9-209ENST00000564255 RFESDQ8TAC1 157 aa2.04□□□□□ -2.08
CHD9-209ENST00000564255 ZNF671Q8TAW3 534 aa2.04□□□□□ -2.08
CHD9-209ENST00000564255 ADAMTS16Q8TE57 1224 aa2.04□□□□□ -2.08
CHD9-209ENST00000564255 AGAP3Q96P47 875 aa2.04□□□□□ -2.08
CHD9-209ENST00000564255 CCDC77Q9BR77 488 aa2.04□□□□□ -2.08
CHD9-209ENST00000564255 TM2D1Q9BX74 207 aa2.04□□□□□ -2.08
CHD9-209ENST00000564255 PKIBQ9C010 78 aa2.04□□□□□ -2.08
CHD9-209ENST00000564255 LRRN3Q9H3W5 708 aa2.04□□□□□ -2.08
CHD9-209ENST00000564255 PPDPFQ9H3Y8 114 aa2.04□□□□□ -2.08
CHD9-209ENST00000564255 METTL7AQ9H8H3 244 aa2.04□□□□□ -2.08
CHD9-209ENST00000564255 MCCC2Q9HCC0 563 aa2.04□□□□□ -2.08
CHD9-209ENST00000564255 IL36GQ9NZH8 169 aa2.04□□□□□ -2.08
CHD9-209ENST00000564255 MDFICQ9P1T7 246 aa2.04□□□□□ -2.08
CHD9-209ENST00000564255 ONECUT1Q9UBC0 465 aa2.04□□□□□ -2.08
CHD9-209ENST00000564255 LCMT1Q9UIC8 334 aa2.04□□□□□ -2.08
CHD9-209ENST00000564255 MUTYHQ9UIF7 546 aa2.04□□□□□ -2.08
CHD9-209ENST00000564255 SAMD4AQ9UPU9 718 aaKnown RBP2.04□□□□□ -2.08
CHD9-209ENST00000564255 IGHV2-70DA0A0C4DH43 119 aa2.04□□□□□ -2.08
CHD9-209ENST00000564255 OR52A4PA6NMU1 304 aa2.04□□□□□ -2.08
CHD9-209ENST00000564255 ZNF487B1APH4 448 aa2.04□□□□□ -2.08
CHD9-209ENST00000564255 ZG16O60844 167 aa2.04□□□□□ -2.08
CHD9-209ENST00000564255 CT45A10P0DMU9 189 aa2.04□□□□□ -2.08
CHD9-209ENST00000564255 ATP5A1P25705 553 aaKnown RBP2.04□□□□□ -2.08
CHD9-209ENST00000564255 ELK3P41970 407 aa2.04□□□□□ -2.08
CHD9-209ENST00000564255 ARHGDIBP52566 201 aa2.04□□□□□ -2.08
CHD9-209ENST00000564255 VLDLRP98155 873 aa2.04□□□□□ -2.08
CHD9-209ENST00000564255 OTUD4Q01804 1114 aaKnown RBP2.04□□□□□ -2.08
CHD9-209ENST00000564255 LTB4RQ15722 352 aa2.04□□□□□ -2.08
CHD9-209ENST00000564255 GLIPR1L2Q4G1C9 344 aa2.04□□□□□ -2.08
CHD9-209ENST00000564255 KRTAP5-4Q6L8H1 288 aa2.04□□□□□ -2.08
CHD9-209ENST00000564255 ERICH1Q86X53 443 aa2.04□□□□□ -2.08
CHD9-209ENST00000564255 OR52K2Q8NGK3 314 aa2.04□□□□□ -2.08
CHD9-209ENST00000564255 ITLN1Q8WWA0 313 aa2.04□□□□□ -2.08
CHD9-209ENST00000564255 MTMR9Q96QG7 549 aa2.04□□□□□ -2.08
CHD9-209ENST00000564255 SGK2Q9HBY8 427 aa2.04□□□□□ -2.08
CHD9-209ENST00000564255 ZNF639Q9UID6 485 aa2.04□□□□□ -2.08
CHD9-209ENST00000564255 A0A1B0GTH9 108 aa2.04□□□□□ -2.08
CHD9-209ENST00000564255 LRP5LA4QPB2 252 aa2.04□□□□□ -2.08
CHD9-209ENST00000564255 PRKAB2O43741 272 aa2.04□□□□□ -2.08
CHD9-209ENST00000564255 HPP00738 406 aa2.04□□□□□ -2.08
CHD9-209ENST00000564255 CA1P00915 261 aaPredicted RBP2.04□□□□□ -2.08
CHD9-209ENST00000564255 ALDH3B2P48448 385 aa2.04□□□□□ -2.08
CHD9-209ENST00000564255 EFNB2P52799 333 aa2.04□□□□□ -2.08
CHD9-209ENST00000564255 SEC61GP60059 68 aa2.04□□□□□ -2.08
CHD9-209ENST00000564255 ERVK11-1P61568 191 aa2.04□□□□□ -2.08
CHD9-209ENST00000564255 PUDPQ08623 228 aa2.04□□□□□ -2.08
CHD9-209ENST00000564255 DOK6Q6PKX4 331 aa2.04□□□□□ -2.08
CHD9-209ENST00000564255 METAP1DQ6UB28 335 aaPredicted RBP2.04□□□□□ -2.08
CHD9-209ENST00000564255 RUFY3Q7L099 469 aa2.04□□□□□ -2.08
CHD9-209ENST00000564255 NBPF5PQ86XG9 351 aaPredicted RBP2.04□□□□□ -2.08
CHD9-209ENST00000564255 MFSD9Q8NBP5 474 aa2.04□□□□□ -2.08
CHD9-209ENST00000564255 SCFD1Q8WVM8 642 aa2.04□□□□□ -2.08
CHD9-209ENST00000564255 RBM14Q96PK6 669 aaKnown RBP2.04□□□□□ -2.08
CHD9-209ENST00000564255 CCNL2Q96S94 520 aaPredicted RBP2.04□□□□□ -2.08
CHD9-209ENST00000564255 ZNF670Q9BS34 389 aa2.04□□□□□ -2.08
CHD9-209ENST00000564255 RHBGQ9H310 441 aa2.04□□□□□ -2.08
CHD9-209ENST00000564255 HEXA-AS1Q9H8Q6 139 aa2.04□□□□□ -2.08
CHD9-209ENST00000564255 VPS37BQ9H9H4 285 aa2.04□□□□□ -2.08
CHD9-209ENST00000564255 ALG6Q9Y672 507 aa2.04□□□□□ -2.08
CHD9-209ENST00000564255 CTAGE15A4D2H0 777 aa2.03□□□□□ -2.08
CHD9-209ENST00000564255 ZNF840PA6NDX5 716 aa2.03□□□□□ -2.08
CHD9-209ENST00000564255 PRR23D1E9PI22 279 aaPredicted RBP2.03□□□□□ -2.08
CHD9-209ENST00000564255 G3V3Y1 287 aa2.03□□□□□ -2.08
CHD9-209ENST00000564255 G3V4G9 280 aa2.03□□□□□ -2.08
CHD9-209ENST00000564255 LRATO95237 230 aa2.03□□□□□ -2.08
CHD9-209ENST00000564255 NDUFB10O96000 172 aa2.03□□□□□ -2.08
CHD9-209ENST00000564255 PGK1P00558 417 aa2.03□□□□□ -2.08
CHD9-209ENST00000564255 SERPINB2P05120 415 aa2.03□□□□□ -2.08
CHD9-209ENST00000564255 CD55P08174 381 aa2.03□□□□□ -2.08
CHD9-209ENST00000564255 UQCRFS1P1P0C7P4 283 aa2.03□□□□□ -2.08
CHD9-209ENST00000564255 PRR23D2P0DMB1 279 aaPredicted RBP2.03□□□□□ -2.08
CHD9-209ENST00000564255 SLC2A3P11169 496 aa2.03□□□□□ -2.08
CHD9-209ENST00000564255 GCFC2P16383 781 aaKnown RBP2.03□□□□□ -2.08
CHD9-209ENST00000564255 DPEP1P16444 411 aa2.03□□□□□ -2.08
CHD9-209ENST00000564255 IMPDH1P20839 514 aa2.03□□□□□ -2.08
CHD9-209ENST00000564255 OXTRP30559 389 aa2.03□□□□□ -2.08
CHD9-209ENST00000564255 GNPDA1P46926 289 aa2.03□□□□□ -2.08
CHD9-209ENST00000564255 TDO2P48775 406 aa2.03□□□□□ -2.08
CHD9-209ENST00000564255 DUSP3P51452 185 aaPredicted RBP2.03□□□□□ -2.08
CHD9-209ENST00000564255 CDH4P55283 916 aa2.03□□□□□ -2.08
CHD9-209ENST00000564255 ERVPABLB-1P60509 514 aa2.03□□□□□ -2.08
CHD9-209ENST00000564255 CD300CQ08708 224 aa2.03□□□□□ -2.08
CHD9-209ENST00000564255 FCHO2Q0JRZ9 810 aa2.03□□□□□ -2.08
CHD9-209ENST00000564255 BST1Q10588 318 aa2.03□□□□□ -2.08
CHD9-209ENST00000564255 KLRB1Q12918 225 aa2.03□□□□□ -2.08
CHD9-209ENST00000564255 PEX6Q13608 980 aa2.03□□□□□ -2.08
CHD9-209ENST00000564255 KCNJ11Q14654 390 aa2.03□□□□□ -2.08
CHD9-209ENST00000564255 MICAQ29983 383 aa2.03□□□□□ -2.08
CHD9-209ENST00000564255 SLC25A52Q3SY17 297 aa2.03□□□□□ -2.08
CHD9-209ENST00000564255 TEX44Q53QW1 395 aa2.03□□□□□ -2.08
CHD9-209ENST00000564255 CTSL3PQ5NE16 218 aa2.03□□□□□ -2.08
CHD9-209ENST00000564255 LEMD1Q68G75 181 aa2.03□□□□□ -2.08
CHD9-209ENST00000564255 ATL3Q6DD88 541 aa2.03□□□□□ -2.08
CHD9-209ENST00000564255 ZNF343Q6P1L6 599 aa2.03□□□□□ -2.08
CHD9-209ENST00000564255 PAQR6Q6TCH4 344 aa2.03□□□□□ -2.08
CHD9-209ENST00000564255 CCDC80Q76M96 950 aa2.03□□□□□ -2.08
CHD9-209ENST00000564255 CTAGE6Q86UF2 777 aa2.03□□□□□ -2.08
CHD9-209ENST00000564255 FAM228AQ86W67 206 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms