RNA–Protein interactions for RNA: ENST00000563945.1

HERC2-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-204ENST00000563945 TSSK3Q96PN8 268 aa18.62■□□□□ 0.57
HERC2-204ENST00000563945 CCT7Q99832 543 aa18.62■□□□□ 0.57
HERC2-204ENST00000563945 REG4Q9BYZ8 158 aa18.62■□□□□ 0.57
HERC2-204ENST00000563945 ACSS1Q9NUB1 689 aaPredicted RBP18.62■□□□□ 0.57
HERC2-204ENST00000563945 A0A1W2PQD3 144 aa18.61■□□□□ 0.57
HERC2-204ENST00000563945 GTPBP1O00178 669 aaKnown RBP18.61■□□□□ 0.57
HERC2-204ENST00000563945 IFNA2P01563 188 aa18.61■□□□□ 0.57
HERC2-204ENST00000563945 DNAJB13P59910 316 aa18.61■□□□□ 0.57
HERC2-204ENST00000563945 KIAA0040Q15053 153 aa18.61■□□□□ 0.57
HERC2-204ENST00000563945 ZNF239Q16600 458 aaKnown RBP18.61■□□□□ 0.57
HERC2-204ENST00000563945 NCMAPQ5T1S8 102 aa18.61■□□□□ 0.57
HERC2-204ENST00000563945 CCNJQ5T5M9 372 aa18.61■□□□□ 0.57
HERC2-204ENST00000563945 LRIG3Q6UXM1 1119 aa18.61■□□□□ 0.57
HERC2-204ENST00000563945 MTERF4Q7Z6M4 381 aaKnown RBP18.61■□□□□ 0.57
HERC2-204ENST00000563945 TUSC5Q8IXB3 177 aa18.61■□□□□ 0.57
HERC2-204ENST00000563945 IFT20Q8IY31 132 aa18.61■□□□□ 0.57
HERC2-204ENST00000563945 ZNF619Q8N2I2 560 aa18.61■□□□□ 0.57
HERC2-204ENST00000563945 ZNF527Q8NB42 609 aa18.61■□□□□ 0.57
HERC2-204ENST00000563945 MAPK1IP1LQ8NDC0 245 aa18.61■□□□□ 0.57
HERC2-204ENST00000563945 ATP6V1C2Q8NEY4 427 aa18.61■□□□□ 0.57
HERC2-204ENST00000563945 POC1BQ8TC44 478 aa18.61■□□□□ 0.57
HERC2-204ENST00000563945 RNF128Q8TEB7 428 aa18.61■□□□□ 0.57
HERC2-204ENST00000563945 ABHD3Q8WU67 409 aa18.61■□□□□ 0.57
HERC2-204ENST00000563945 KISS1RQ969F8 398 aaPredicted RBP18.61■□□□□ 0.57
HERC2-204ENST00000563945 C16orf58Q96GQ5 468 aa18.61■□□□□ 0.57
HERC2-204ENST00000563945 ALG2Q9H553 416 aa18.61■□□□□ 0.57
HERC2-204ENST00000563945 NTMQ9P121 344 aa18.61■□□□□ 0.57
HERC2-204ENST00000563945 KLHL13Q9P2N7 655 aa18.61■□□□□ 0.57
HERC2-204ENST00000563945 FIS1Q9Y3D6 152 aa18.61■□□□□ 0.57
HERC2-204ENST00000563945 ZNF195O14628 629 aa18.6■□□□□ 0.57
HERC2-204ENST00000563945 TBX19O60806 448 aa18.6■□□□□ 0.57
HERC2-204ENST00000563945 YES1P07947 543 aa18.6■□□□□ 0.57
HERC2-204ENST00000563945 NEFHP12036 1026 aa18.6■□□□□ 0.57
HERC2-204ENST00000563945 PRPH2P23942 346 aa18.6■□□□□ 0.57
HERC2-204ENST00000563945 ELK4P28324 431 aa18.6■□□□□ 0.57
HERC2-204ENST00000563945 ASMTP46597 345 aa18.6■□□□□ 0.57
HERC2-204ENST00000563945 ZNF844Q08AG5 666 aa18.6■□□□□ 0.57
HERC2-204ENST00000563945 P2RY6Q15077 328 aa18.6■□□□□ 0.57
HERC2-204ENST00000563945 TSC22D1Q15714 1073 aa18.6■□□□□ 0.57
HERC2-204ENST00000563945 TAB1Q15750 504 aa18.6■□□□□ 0.57
HERC2-204ENST00000563945 TMEM176BQ3YBM2 270 aaPredicted RBP18.6■□□□□ 0.57
HERC2-204ENST00000563945 CLEC6AQ6EIG7 209 aa18.6■□□□□ 0.57
HERC2-204ENST00000563945 TFAP2EQ6VUC0 442 aa18.6■□□□□ 0.57
HERC2-204ENST00000563945 FCRLAQ7L513 359 aa18.6■□□□□ 0.57
HERC2-204ENST00000563945 NUFIP2Q7Z417 695 aaKnown RBP18.6■□□□□ 0.57
HERC2-204ENST00000563945 R3HCC1LQ7Z5L2 792 aaKnown RBP18.6■□□□□ 0.57
HERC2-204ENST00000563945 ZAR1Q86SH2 424 aa18.6■□□□□ 0.57
HERC2-204ENST00000563945 HOMEZQ8IX15 550 aa18.6■□□□□ 0.57
HERC2-204ENST00000563945 CLHC1Q8NHS4 586 aa18.6■□□□□ 0.57
HERC2-204ENST00000563945 ARL8AQ96BM9 186 aa18.6■□□□□ 0.57
HERC2-204ENST00000563945 OTUB1Q96FW1 271 aaPredicted RBP18.6■□□□□ 0.57
HERC2-204ENST00000563945 BTBD2Q9BX70 525 aa18.6■□□□□ 0.57
HERC2-204ENST00000563945 HOXD1Q9GZZ0 328 aa18.6■□□□□ 0.57
HERC2-204ENST00000563945 L2HGDHQ9H9P8 463 aa18.6■□□□□ 0.57
HERC2-204ENST00000563945 GP6Q9HCN6 339 aa18.6■□□□□ 0.57
HERC2-204ENST00000563945 ZCCHC3Q9NUD5 404 aaKnown RBP18.6■□□□□ 0.57
HERC2-204ENST00000563945 BAIAP2L1Q9UHR4 511 aa18.6■□□□□ 0.57
HERC2-204ENST00000563945 EMCNQ9ULC0 261 aa18.6■□□□□ 0.57
HERC2-204ENST00000563945 LIPT1Q9Y234 373 aa18.6■□□□□ 0.57
HERC2-204ENST00000563945 CCL27Q9Y4X3 112 aa18.6■□□□□ 0.57
HERC2-204ENST00000563945 SONP18583 2426 aaKnown RBP18.6■□□□□ 0.57
HERC2-204ENST00000563945 PRR14LQ5THK1 2151 aa18.59■□□□□ 0.57
HERC2-204ENST00000563945 GIMAP1-GIMAP5A0A087WTJ2 511 aa18.59■□□□□ 0.57
HERC2-204ENST00000563945 ADAP00813 363 aa18.59■□□□□ 0.57
HERC2-204ENST00000563945 PROCP04070 461 aa18.59■□□□□ 0.57
HERC2-204ENST00000563945 LINGO3P0C6S8 592 aa18.59■□□□□ 0.57
HERC2-204ENST00000563945 CPA3P15088 417 aa18.59■□□□□ 0.57
HERC2-204ENST00000563945 SDC1P18827 310 aa18.59■□□□□ 0.57
HERC2-204ENST00000563945 ADH6P28332 368 aa18.59■□□□□ 0.57
HERC2-204ENST00000563945 FAPQ12884 760 aa18.59■□□□□ 0.57
HERC2-204ENST00000563945 FOXF1Q12946 379 aa18.59■□□□□ 0.57
HERC2-204ENST00000563945 ZNF385BQ569K4 471 aa18.59■□□□□ 0.57
HERC2-204ENST00000563945 HMBOX1Q6NT76 420 aa18.59■□□□□ 0.57
HERC2-204ENST00000563945 GABRG1Q8N1C3 465 aa18.59■□□□□ 0.57
HERC2-204ENST00000563945 SLC43A2Q8N370 569 aa18.59■□□□□ 0.57
HERC2-204ENST00000563945 BANPQ8N9N5 519 aa18.59■□□□□ 0.57
HERC2-204ENST00000563945 FBXO27Q8NI29 283 aa18.59■□□□□ 0.57
HERC2-204ENST00000563945 MTERF3Q96E29 417 aa18.59■□□□□ 0.57
HERC2-204ENST00000563945 GIMAP5Q96F15 307 aa18.59■□□□□ 0.57
HERC2-204ENST00000563945 HS6ST2Q96MM7 605 aa18.59■□□□□ 0.57
HERC2-204ENST00000563945 GIN1Q9NXP7 522 aa18.59■□□□□ 0.57
HERC2-204ENST00000563945 TMED5Q9Y3A6 229 aa18.59■□□□□ 0.57
HERC2-204ENST00000563945 GPC6Q9Y625 555 aaPredicted RBP18.59■□□□□ 0.57
HERC2-204ENST00000563945 CHD3Q12873 2000 aaKnown RBP18.59■□□□□ 0.57
HERC2-204ENST00000563945 A0A1W2PPM1 405 aa18.58■□□□□ 0.56
HERC2-204ENST00000563945 OVOL3O00110 214 aa18.58■□□□□ 0.56
HERC2-204ENST00000563945 AZIN1O14977 448 aa18.58■□□□□ 0.56
HERC2-204ENST00000563945 GCM2O75603 506 aaPredicted RBP18.58■□□□□ 0.56
HERC2-204ENST00000563945 SOX30O94993 753 aa18.58■□□□□ 0.56
HERC2-204ENST00000563945 NTN1O95631 604 aa18.58■□□□□ 0.56
HERC2-204ENST00000563945 SOD3P08294 240 aa18.58■□□□□ 0.56
HERC2-204ENST00000563945 SLC7A1P30825 629 aa18.58■□□□□ 0.56
HERC2-204ENST00000563945 CDKN1AP38936 164 aa18.58■□□□□ 0.56
HERC2-204ENST00000563945 P2RX1P51575 399 aa18.58■□□□□ 0.56
HERC2-204ENST00000563945 RPL38P63173 70 aaKnown RBP18.58■□□□□ 0.56
HERC2-204ENST00000563945 ITGADQ13349 1161 aa18.58■□□□□ 0.56
HERC2-204ENST00000563945 CD226Q15762 336 aa18.58■□□□□ 0.56
HERC2-204ENST00000563945 ZNF672Q499Z4 452 aaPredicted RBP18.58■□□□□ 0.56
HERC2-204ENST00000563945 GALNTL6Q49A17 601 aa18.58■□□□□ 0.56
HERC2-204ENST00000563945 BHLHA15Q7RTS1 189 aaPredicted RBP18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms