RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 RABEP2Q9H5N1 569 aa7.73□□□□□ -1.17
UBR1-204ENST00000563239 POLE3Q9NRF9 147 aa7.73□□□□□ -1.17
UBR1-204ENST00000563239 MED17Q9NVC6 651 aa7.73□□□□□ -1.17
UBR1-204ENST00000563239 DKKL1Q9UK85 242 aa7.73□□□□□ -1.17
UBR1-204ENST00000563239 LIPT1Q9Y234 373 aa7.73□□□□□ -1.17
UBR1-204ENST00000563239 CARD8Q9Y2G2 431 aa7.73□□□□□ -1.17
UBR1-204ENST00000563239 ZNF337Q9Y3M9 751 aa7.73□□□□□ -1.17
UBR1-204ENST00000563239 WDR45Q9Y484 360 aa7.73□□□□□ -1.17
UBR1-204ENST00000563239 DSPPQ9NZW4 1301 aa7.73□□□□□ -1.17
UBR1-204ENST00000563239 DIDO1Q9BTC0 2240 aaKnown RBP7.72□□□□□ -1.17
UBR1-204ENST00000563239 KIAA1549Q9HCM3 1950 aa7.72□□□□□ -1.17
UBR1-204ENST00000563239 A1L4Q6 167 aa7.72□□□□□ -1.17
UBR1-204ENST00000563239 C7orf72A4D263 438 aa7.72□□□□□ -1.17
UBR1-204ENST00000563239 AGAP5A6NIR3 686 aa7.72□□□□□ -1.17
UBR1-204ENST00000563239 CLDN24A6NM45 220 aa7.72□□□□□ -1.17
UBR1-204ENST00000563239 AHRRA9YTQ3 701 aa7.72□□□□□ -1.17
UBR1-204ENST00000563239 H0YC42 278 aa7.72□□□□□ -1.17
UBR1-204ENST00000563239 CLIC1O00299 241 aa7.72□□□□□ -1.17
UBR1-204ENST00000563239 HCRTR2O43614 444 aa7.72□□□□□ -1.17
UBR1-204ENST00000563239 EFNA2O43921 213 aa7.72□□□□□ -1.17
UBR1-204ENST00000563239 ADAM11O75078 769 aa7.72□□□□□ -1.17
UBR1-204ENST00000563239 ANP32DO95626 131 aa7.72□□□□□ -1.17
UBR1-204ENST00000563239 NTN1O95631 604 aa7.72□□□□□ -1.17
UBR1-204ENST00000563239 EPPINO95925 133 aa7.72□□□□□ -1.17
UBR1-204ENST00000563239 SNRPB2P08579 225 aaKnown RBP7.72□□□□□ -1.17
UBR1-204ENST00000563239 LINGO3P0C6S8 592 aa7.72□□□□□ -1.17
UBR1-204ENST00000563239 HPGDP15428 266 aa7.72□□□□□ -1.17
UBR1-204ENST00000563239 ZNF708P17019 499 aa7.72□□□□□ -1.17
UBR1-204ENST00000563239 IL11P20809 199 aa7.72□□□□□ -1.17
UBR1-204ENST00000563239 DRD4P21917 467 aa7.72□□□□□ -1.17
UBR1-204ENST00000563239 RPS4Y1P22090 263 aaKnown RBP7.72□□□□□ -1.17
UBR1-204ENST00000563239 PGM1P36871 562 aa7.72□□□□□ -1.17
UBR1-204ENST00000563239 CRATP43155 626 aa7.72□□□□□ -1.17
UBR1-204ENST00000563239 SUCLG1P53597 346 aaKnown RBP7.72□□□□□ -1.17
UBR1-204ENST00000563239 TPD52P55327 224 aaPredicted RBP7.72□□□□□ -1.17
UBR1-204ENST00000563239 PMPCAQ10713 525 aa7.72□□□□□ -1.17
UBR1-204ENST00000563239 KLF10Q13118 480 aa7.72□□□□□ -1.17
UBR1-204ENST00000563239 SKP2Q13309 424 aa7.72□□□□□ -1.17
UBR1-204ENST00000563239 FGFBP1Q14512 234 aa7.72□□□□□ -1.17
UBR1-204ENST00000563239 TOMM34Q15785 309 aaPredicted RBP7.72□□□□□ -1.17
UBR1-204ENST00000563239 ADRM1Q16186 407 aa7.72□□□□□ -1.17
UBR1-204ENST00000563239 BCL2A1Q16548 175 aa7.72□□□□□ -1.17
UBR1-204ENST00000563239 ZNF630Q2M218 657 aaPredicted RBP7.72□□□□□ -1.17
UBR1-204ENST00000563239 PLPPR5Q32ZL2 321 aa7.72□□□□□ -1.17
UBR1-204ENST00000563239 ACSF3Q4G176 576 aaPredicted RBP7.72□□□□□ -1.17
UBR1-204ENST00000563239 GPAT3Q53EU6 434 aa7.72□□□□□ -1.17
UBR1-204ENST00000563239 RUNDC3AQ59EK9 446 aa7.72□□□□□ -1.17
UBR1-204ENST00000563239 ATAD3BQ5T9A4 648 aa7.72□□□□□ -1.17
UBR1-204ENST00000563239 HIST2H2BCQ6DN03 193 aa7.72□□□□□ -1.17
UBR1-204ENST00000563239 MTFR2Q6P444 385 aa7.72□□□□□ -1.17
UBR1-204ENST00000563239 PLXDC2Q6UX71 529 aa7.72□□□□□ -1.17
UBR1-204ENST00000563239 RPTNQ6XPR3 784 aa7.72□□□□□ -1.17
UBR1-204ENST00000563239 LRRC74BQ6ZQY2 392 aa7.72□□□□□ -1.17
UBR1-204ENST00000563239 ADGRE4PQ86SQ3 457 aa7.72□□□□□ -1.17
UBR1-204ENST00000563239 CCDC71Q8IV32 467 aaPredicted RBP7.72□□□□□ -1.17
UBR1-204ENST00000563239 ZNF619Q8N2I2 560 aa7.72□□□□□ -1.17
UBR1-204ENST00000563239 ZNF808Q8N4W9 903 aaPredicted RBP7.72□□□□□ -1.17
UBR1-204ENST00000563239 ZNF527Q8NB42 609 aa7.72□□□□□ -1.17
UBR1-204ENST00000563239 GPR119Q8TDV5 335 aa7.72□□□□□ -1.17
UBR1-204ENST00000563239 TSPEARQ8WU66 669 aa7.72□□□□□ -1.17
UBR1-204ENST00000563239 SLC38A5Q8WUX1 472 aa7.72□□□□□ -1.17
UBR1-204ENST00000563239 SFXN2Q96NB2 322 aa7.72□□□□□ -1.17
UBR1-204ENST00000563239 TUBA1CQ9BQE3 449 aa7.72□□□□□ -1.17
UBR1-204ENST00000563239 CPPED1Q9BRF8 314 aaPredicted RBP7.72□□□□□ -1.17
UBR1-204ENST00000563239 TRIM8Q9BZR9 551 aa7.72□□□□□ -1.17
UBR1-204ENST00000563239 LAT2Q9GZY6 243 aa7.72□□□□□ -1.17
UBR1-204ENST00000563239 PTGES2Q9H7Z7 377 aa7.72□□□□□ -1.17
UBR1-204ENST00000563239 ALKBH4Q9NXW9 302 aa7.72□□□□□ -1.17
UBR1-204ENST00000563239 FAM53CQ9NYF3 392 aa7.72□□□□□ -1.17
UBR1-204ENST00000563239 SUCOQ9UBS9 1254 aaKnown RBP7.72□□□□□ -1.17
UBR1-204ENST00000563239 CAMK2AQ9UQM7 478 aa7.72□□□□□ -1.17
UBR1-204ENST00000563239 RNF6Q9Y252 685 aa7.72□□□□□ -1.17
UBR1-204ENST00000563239 NDUFAF1Q9Y375 327 aa7.72□□□□□ -1.17
UBR1-204ENST00000563239 L3MBTL1Q9Y468 752 aa7.72□□□□□ -1.17
UBR1-204ENST00000563239 SPTBN1Q01082 2364 aaKnown RBP7.71□□□□□ -1.17
UBR1-204ENST00000563239 ICE1Q9Y2F5 2266 aa7.71□□□□□ -1.17
UBR1-204ENST00000563239 DCHS2Q6V1P9 2916 aa7.71□□□□□ -1.18
UBR1-204ENST00000563239 PCNX1Q96RV3 2341 aa7.71□□□□□ -1.18
UBR1-204ENST00000563239 A0A087WZY1 265 aa7.71□□□□□ -1.18
UBR1-204ENST00000563239 A0A0G2JNJ9 132 aa7.71□□□□□ -1.18
UBR1-204ENST00000563239 FIGNL2A6NMB9 653 aa7.71□□□□□ -1.18
UBR1-204ENST00000563239 ETV2O00321 342 aaPredicted RBP7.71□□□□□ -1.18
UBR1-204ENST00000563239 ZNF264O43296 627 aa7.71□□□□□ -1.18
UBR1-204ENST00000563239 EIF4E2O60573 245 aaKnown RBP7.71□□□□□ -1.18
UBR1-204ENST00000563239 HOXD4P09016 255 aaPredicted RBP7.71□□□□□ -1.18
UBR1-204ENST00000563239 NR2F1P10589 423 aa7.71□□□□□ -1.18
UBR1-204ENST00000563239 UBL4AP11441 157 aa7.71□□□□□ -1.18
UBR1-204ENST00000563239 GABRA1P14867 456 aa7.71□□□□□ -1.18
UBR1-204ENST00000563239 ZNF17P17021 662 aa7.71□□□□□ -1.18
UBR1-204ENST00000563239 GPX2P18283 190 aa7.71□□□□□ -1.18
UBR1-204ENST00000563239 AGAP20933 346 aa7.71□□□□□ -1.18
UBR1-204ENST00000563239 COL8A1P27658 744 aa7.71□□□□□ -1.18
UBR1-204ENST00000563239 GRNP28799 593 aaKnown RBP7.71□□□□□ -1.18
UBR1-204ENST00000563239 CEACAM8P31997 349 aaPredicted RBP7.71□□□□□ -1.18
UBR1-204ENST00000563239 LSP1P33241 339 aa7.71□□□□□ -1.18
UBR1-204ENST00000563239 PTGER4P35408 488 aa7.71□□□□□ -1.18
UBR1-204ENST00000563239 ANXA11P50995 505 aaKnown RBP7.71□□□□□ -1.18
UBR1-204ENST00000563239 P2RX1P51575 399 aa7.71□□□□□ -1.18
UBR1-204ENST00000563239 CLDN20P56880 219 aa7.71□□□□□ -1.18
UBR1-204ENST00000563239 DSTNP60981 165 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms