RNA–Protein interactions for RNA: ENST00000562772.1

AP003071.2-201, humanhuman

TSL 1 (best) BASIC

Gene AP003071.2, Length 990 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003071.2-201ENST00000562772 HMGCS1Q01581 520 aa6.94□□□□□ -1.3
AP003071.2-201ENST00000562772 ZNF763Q0D2J5 394 aa6.94□□□□□ -1.3
AP003071.2-201ENST00000562772 DUSP8Q13202 625 aa6.94□□□□□ -1.3
AP003071.2-201ENST00000562772 SF3B4Q15427 424 aaKnown RBP eCLIP6.94□□□□□ -1.3
AP003071.2-201ENST00000562772 CDSNQ15517 529 aa6.94□□□□□ -1.3
AP003071.2-201ENST00000562772 TRMT12Q53H54 448 aaKnown RBP6.94□□□□□ -1.3
AP003071.2-201ENST00000562772 NHSL2Q5HYW2 709 aa6.94□□□□□ -1.3
AP003071.2-201ENST00000562772 CFAP157Q5JU67 520 aa6.94□□□□□ -1.3
AP003071.2-201ENST00000562772 WLSQ5T9L3 541 aa6.94□□□□□ -1.3
AP003071.2-201ENST00000562772 FNDC7Q5VTL7 733 aa6.94□□□□□ -1.3
AP003071.2-201ENST00000562772 LIPMQ5VYY2 423 aa6.94□□□□□ -1.3
AP003071.2-201ENST00000562772 ATG16L1Q676U5 607 aa6.94□□□□□ -1.3
AP003071.2-201ENST00000562772 WDR93Q6P2C0 686 aa6.94□□□□□ -1.3
AP003071.2-201ENST00000562772 EMBQ6PCB8 327 aa6.94□□□□□ -1.3
AP003071.2-201ENST00000562772 ULK2Q8IYT8 1036 aa6.94□□□□□ -1.3
AP003071.2-201ENST00000562772 BANPQ8N9N5 519 aa6.94□□□□□ -1.3
AP003071.2-201ENST00000562772 NEIL3Q8TAT5 605 aa6.94□□□□□ -1.3
AP003071.2-201ENST00000562772 DOK4Q8TEW6 326 aa6.94□□□□□ -1.3
AP003071.2-201ENST00000562772 AENQ8WTP8 325 aaKnown RBP6.94□□□□□ -1.3
AP003071.2-201ENST00000562772 CA5BP1Q8WTZ4 195 aa6.94□□□□□ -1.3
AP003071.2-201ENST00000562772 HGDQ93099 445 aa6.94□□□□□ -1.3
AP003071.2-201ENST00000562772 ZNF597Q96LX8 424 aa6.94□□□□□ -1.3
AP003071.2-201ENST00000562772 BTBD9Q96Q07 612 aa6.94□□□□□ -1.3
AP003071.2-201ENST00000562772 ALPK1Q96QP1 1244 aa6.94□□□□□ -1.3
AP003071.2-201ENST00000562772 KCNA7Q96RP8 456 aa6.94□□□□□ -1.3
AP003071.2-201ENST00000562772 ATP6V0BQ99437 205 aa6.94□□□□□ -1.3
AP003071.2-201ENST00000562772 TTYH2Q9BSA4 534 aa6.94□□□□□ -1.3
AP003071.2-201ENST00000562772 DOHHQ9BU89 302 aa6.94□□□□□ -1.3
AP003071.2-201ENST00000562772 TMEM109Q9BVC6 243 aa6.94□□□□□ -1.3
AP003071.2-201ENST00000562772 NXF5Q9H1B4 397 aaKnown RBP6.94□□□□□ -1.3
AP003071.2-201ENST00000562772 LDAHQ9H6V9 325 aa6.94□□□□□ -1.3
AP003071.2-201ENST00000562772 MYNNQ9NPC7 610 aa6.94□□□□□ -1.3
AP003071.2-201ENST00000562772 PNPLA3Q9NST1 481 aa6.94□□□□□ -1.3
AP003071.2-201ENST00000562772 GIMAP4Q9NUV9 329 aa6.94□□□□□ -1.3
AP003071.2-201ENST00000562772 PNPOQ9NVS9 261 aa6.94□□□□□ -1.3
AP003071.2-201ENST00000562772 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.94□□□□□ -1.3
AP003071.2-201ENST00000562772 BCAP29Q9UHQ4 241 aa6.94□□□□□ -1.3
AP003071.2-201ENST00000562772 LGALS13Q9UHV8 139 aa6.94□□□□□ -1.3
AP003071.2-201ENST00000562772 RNF6Q9Y252 685 aa6.94□□□□□ -1.3
AP003071.2-201ENST00000562772 PLLPQ9Y342 182 aa6.94□□□□□ -1.3
AP003071.2-201ENST00000562772 TIMM22Q9Y584 194 aa6.94□□□□□ -1.3
AP003071.2-201ENST00000562772 LIPGQ9Y5X9 500 aa6.94□□□□□ -1.3
AP003071.2-201ENST00000562772 POLQO75417 2590 aa6.94□□□□□ -1.3
AP003071.2-201ENST00000562772 ANKRD17O75179 2603 aaKnown RBP6.93□□□□□ -1.3
AP003071.2-201ENST00000562772 OR6C70A6NIJ9 312 aa6.93□□□□□ -1.3
AP003071.2-201ENST00000562772 AHRRA9YTQ3 701 aa6.93□□□□□ -1.3
AP003071.2-201ENST00000562772 SLC28A1O00337 649 aa6.93□□□□□ -1.3
AP003071.2-201ENST00000562772 AZIN1O14977 448 aa6.93□□□□□ -1.3
AP003071.2-201ENST00000562772 ZNHIT1O43257 154 aa6.93□□□□□ -1.3
AP003071.2-201ENST00000562772 TBX19O60806 448 aa6.93□□□□□ -1.3
AP003071.2-201ENST00000562772 TRIM13O60858 407 aa6.93□□□□□ -1.3
AP003071.2-201ENST00000562772 NOL3O60936 208 aaKnown RBP6.93□□□□□ -1.3
AP003071.2-201ENST00000562772 ACTL6BO94805 426 aa6.93□□□□□ -1.3
AP003071.2-201ENST00000562772 MT-ND5P03915 603 aa6.93□□□□□ -1.3
AP003071.2-201ENST00000562772 LPLP06858 475 aa6.93□□□□□ -1.3
AP003071.2-201ENST00000562772 NEFHP12036 1026 aa6.93□□□□□ -1.3
AP003071.2-201ENST00000562772 PRF1P14222 555 aa6.93□□□□□ -1.3
AP003071.2-201ENST00000562772 IGFBP2P18065 325 aa6.93□□□□□ -1.3
AP003071.2-201ENST00000562772 ENDOUP21128 410 aaKnown RBP6.93□□□□□ -1.3
AP003071.2-201ENST00000562772 SERPINB5P36952 375 aa6.93□□□□□ -1.3
AP003071.2-201ENST00000562772 CDK9P50750 372 aaKnown RBP6.93□□□□□ -1.3
AP003071.2-201ENST00000562772 NUP107P57740 925 aa6.93□□□□□ -1.3
AP003071.2-201ENST00000562772 MRPS22P82650 360 aaKnown RBP6.93□□□□□ -1.3
AP003071.2-201ENST00000562772 TEKQ02763 1124 aa6.93□□□□□ -1.3
AP003071.2-201ENST00000562772 DUSP2Q05923 314 aa6.93□□□□□ -1.3
AP003071.2-201ENST00000562772 PCLAFQ15004 111 aa6.93□□□□□ -1.3
AP003071.2-201ENST00000562772 EXOSC7Q15024 291 aaKnown RBP6.93□□□□□ -1.3
AP003071.2-201ENST00000562772 KIAA0040Q15053 153 aa6.93□□□□□ -1.3
AP003071.2-201ENST00000562772 IMPG1Q17R60 797 aa6.93□□□□□ -1.3
AP003071.2-201ENST00000562772 C1orf185Q5T7R7 199 aa6.93□□□□□ -1.3
AP003071.2-201ENST00000562772 PRAMEF20Q5VT98 475 aa6.93□□□□□ -1.3
AP003071.2-201ENST00000562772 TIGD3Q6B0B8 471 aa6.93□□□□□ -1.3
AP003071.2-201ENST00000562772 VASNQ6EMK4 673 aa6.93□□□□□ -1.3
AP003071.2-201ENST00000562772 RTL6Q6ICC9 239 aa6.93□□□□□ -1.3
AP003071.2-201ENST00000562772 FAM71E1Q6IPT2 247 aa6.93□□□□□ -1.3
AP003071.2-201ENST00000562772 SLC22A25Q6T423 547 aa6.93□□□□□ -1.3
AP003071.2-201ENST00000562772 TMEM64Q6YI46 380 aa6.93□□□□□ -1.3
AP003071.2-201ENST00000562772 B3GNT6Q6ZMB0 384 aa6.93□□□□□ -1.3
AP003071.2-201ENST00000562772 C3P1Q6ZMU1 363 aa6.93□□□□□ -1.3
AP003071.2-201ENST00000562772 PIWIL3Q7Z3Z3 882 aaKnown RBP6.93□□□□□ -1.3
AP003071.2-201ENST00000562772 GDF7Q7Z4P5 450 aa6.93□□□□□ -1.3
AP003071.2-201ENST00000562772 TRABD2AQ86V40 505 aa6.93□□□□□ -1.3
AP003071.2-201ENST00000562772 MCEMP1Q8IX19 187 aa6.93□□□□□ -1.3
AP003071.2-201ENST00000562772 FAM9CQ8IZT9 166 aa6.93□□□□□ -1.3
AP003071.2-201ENST00000562772 MMP21Q8N119 569 aa6.93□□□□□ -1.3
AP003071.2-201ENST00000562772 OR52R1Q8NGF1 315 aa6.93□□□□□ -1.3
AP003071.2-201ENST00000562772 OR5M3Q8NGP4 307 aa6.93□□□□□ -1.3
AP003071.2-201ENST00000562772 CAVIN3Q969G5 261 aa6.93□□□□□ -1.3
AP003071.2-201ENST00000562772 DTNBP1Q96EV8 351 aa6.93□□□□□ -1.3
AP003071.2-201ENST00000562772 C14orf79Q96F83 325 aa6.93□□□□□ -1.3
AP003071.2-201ENST00000562772 FCRL1Q96LA6 429 aa6.93□□□□□ -1.3
AP003071.2-201ENST00000562772 VSTM2LQ96N03 204 aa6.93□□□□□ -1.3
AP003071.2-201ENST00000562772 RILPQ96NA2 401 aa6.93□□□□□ -1.3
AP003071.2-201ENST00000562772 PRPF18Q99633 342 aaKnown RBP6.93□□□□□ -1.3
AP003071.2-201ENST00000562772 C1orf21Q9H246 121 aa6.93□□□□□ -1.3
AP003071.2-201ENST00000562772 PAPOLBQ9NRJ5 636 aaKnown RBP6.93□□□□□ -1.3
AP003071.2-201ENST00000562772 TAS2R9Q9NYW1 312 aa6.93□□□□□ -1.3
AP003071.2-201ENST00000562772 NDUFAF4Q9P032 175 aa6.93□□□□□ -1.3
AP003071.2-201ENST00000562772 DTX4Q9Y2E6 619 aa6.93□□□□□ -1.3
AP003071.2-201ENST00000562772 C15orf41Q9Y2V0 281 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms