RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 PLPPR5Q32ZL2 321 aa13.8□□□□□ -0.2
SNRPA1-213ENST00000560856 NDUFAF6Q330K2 333 aa13.8□□□□□ -0.2
SNRPA1-213ENST00000560856 C6orf10Q5SRN2 563 aa13.8□□□□□ -0.2
SNRPA1-213ENST00000560856 ATAD3BQ5T9A4 648 aa13.8□□□□□ -0.2
SNRPA1-213ENST00000560856 RIPPLY2Q5TAB7 128 aa13.8□□□□□ -0.2
SNRPA1-213ENST00000560856 METTL21CQ5VZV1 264 aa13.8□□□□□ -0.2
SNRPA1-213ENST00000560856 NSUN5P2Q63ZY6 315 aa13.8□□□□□ -0.2
SNRPA1-213ENST00000560856 AAGABQ6PD74 315 aa13.8□□□□□ -0.2
SNRPA1-213ENST00000560856 ENPP6Q6UWR7 440 aa13.8□□□□□ -0.2
SNRPA1-213ENST00000560856 ZNF527Q8NB42 609 aa13.8□□□□□ -0.2
SNRPA1-213ENST00000560856 LILRB4Q8NHJ6 448 aa13.8□□□□□ -0.2
SNRPA1-213ENST00000560856 B4GALNT2Q8NHY0 566 aa13.8□□□□□ -0.2
SNRPA1-213ENST00000560856 POC1BQ8TC44 478 aa13.8□□□□□ -0.2
SNRPA1-213ENST00000560856 TRNT1Q96Q11 434 aaKnown RBP13.8□□□□□ -0.2
SNRPA1-213ENST00000560856 UCN2Q96RP3 112 aa13.8□□□□□ -0.2
SNRPA1-213ENST00000560856 TMEM120AQ9BXJ8 343 aa13.8□□□□□ -0.2
SNRPA1-213ENST00000560856 RUBCNLQ9H714 662 aa13.8□□□□□ -0.2
SNRPA1-213ENST00000560856 MED17Q9NVC6 651 aa13.8□□□□□ -0.2
SNRPA1-213ENST00000560856 Q9UFV3 132 aa13.8□□□□□ -0.2
SNRPA1-213ENST00000560856 CARD8Q9Y2G2 431 aa13.8□□□□□ -0.2
SNRPA1-213ENST00000560856 WDR45Q9Y484 360 aa13.8□□□□□ -0.2
SNRPA1-213ENST00000560856 CENPEQ02224 2701 aa13.8□□□□□ -0.2
SNRPA1-213ENST00000560856 A0A087WZY1 265 aa13.79□□□□□ -0.2
SNRPA1-213ENST00000560856 C7orf72A4D263 438 aa13.79□□□□□ -0.2
SNRPA1-213ENST00000560856 LINC01387J3KSC0 135 aa13.79□□□□□ -0.2
SNRPA1-213ENST00000560856 HCRTR2O43614 444 aa13.79□□□□□ -0.2
SNRPA1-213ENST00000560856 DNAJA2O60884 412 aa13.79□□□□□ -0.2
SNRPA1-213ENST00000560856 H6PDO95479 791 aa13.79□□□□□ -0.2
SNRPA1-213ENST00000560856 ETFAP13804 333 aa13.79□□□□□ -0.2
SNRPA1-213ENST00000560856 NCF2P19878 526 aaPredicted RBP13.79□□□□□ -0.2
SNRPA1-213ENST00000560856 CHRNB4P30926 498 aa13.79□□□□□ -0.2
SNRPA1-213ENST00000560856 GCKP35557 465 aa13.79□□□□□ -0.2
SNRPA1-213ENST00000560856 TIMP3P35625 211 aa13.79□□□□□ -0.2
SNRPA1-213ENST00000560856 SUCLG1P53597 346 aaKnown RBP13.79□□□□□ -0.2
SNRPA1-213ENST00000560856 RAET1LQ5VY80 246 aa13.79□□□□□ -0.2
SNRPA1-213ENST00000560856 LRRC74BQ6ZQY2 392 aa13.79□□□□□ -0.2
SNRPA1-213ENST00000560856 LIX1LQ8IVB5 337 aa13.79□□□□□ -0.2
SNRPA1-213ENST00000560856 ZNF619Q8N2I2 560 aa13.79□□□□□ -0.2
SNRPA1-213ENST00000560856 GTPBP8Q8N3Z3 284 aaPredicted RBP13.79□□□□□ -0.2
SNRPA1-213ENST00000560856 NAXEQ8NCW5 288 aa13.79□□□□□ -0.2
SNRPA1-213ENST00000560856 FAM71CQ8NEG0 241 aa13.79□□□□□ -0.2
SNRPA1-213ENST00000560856 ASB5Q8WWX0 329 aa13.79□□□□□ -0.2
SNRPA1-213ENST00000560856 OIT3Q8WWZ8 545 aa13.79□□□□□ -0.2
SNRPA1-213ENST00000560856 CALHM2Q9HA72 323 aa13.79□□□□□ -0.2
SNRPA1-213ENST00000560856 CLCF1Q9UBD9 225 aa13.79□□□□□ -0.2
SNRPA1-213ENST00000560856 LIPT1Q9Y234 373 aa13.79□□□□□ -0.2
SNRPA1-213ENST00000560856 VDAC3Q9Y277 283 aa13.79□□□□□ -0.2
SNRPA1-213ENST00000560856 GMEB1Q9Y692 573 aa13.79□□□□□ -0.2
SNRPA1-213ENST00000560856 DOCK7Q96N67 2140 aa13.78□□□□□ -0.2
SNRPA1-213ENST00000560856 INTS1Q8N201 2190 aaKnown RBP13.78□□□□□ -0.2
SNRPA1-213ENST00000560856 A0A1W2PP18 115 aa13.78□□□□□ -0.2
SNRPA1-213ENST00000560856 MBD3L4A6NDZ8 208 aaPredicted RBP13.78□□□□□ -0.2
SNRPA1-213ENST00000560856 MBD3L3A6NE82 208 aaPredicted RBP13.78□□□□□ -0.2
SNRPA1-213ENST00000560856 MBD3L5A6NJ08 208 aaPredicted RBP13.78□□□□□ -0.2
SNRPA1-213ENST00000560856 PRSS44E7EML9 344 aa13.78□□□□□ -0.2
SNRPA1-213ENST00000560856 H0YC42 278 aa13.78□□□□□ -0.2
SNRPA1-213ENST00000560856 C19orf84I3L1E1 186 aa13.78□□□□□ -0.2
SNRPA1-213ENST00000560856 CLIC1O00299 241 aa13.78□□□□□ -0.2
SNRPA1-213ENST00000560856 EFNA2O43921 213 aa13.78□□□□□ -0.2
SNRPA1-213ENST00000560856 EIF4E2O60573 245 aaKnown RBP13.78□□□□□ -0.2
SNRPA1-213ENST00000560856 BCAS1O75363 584 aaPredicted RBP13.78□□□□□ -0.2
SNRPA1-213ENST00000560856 ANP32DO95626 131 aa13.78□□□□□ -0.2
SNRPA1-213ENST00000560856 VIMP08670 466 aaKnown RBP13.78□□□□□ -0.2
SNRPA1-213ENST00000560856 TROVE2P10155 538 aaKnown RBP eCLIP13.78□□□□□ -0.2
SNRPA1-213ENST00000560856 BMP2P12643 396 aa13.78□□□□□ -0.2
SNRPA1-213ENST00000560856 PEPDP12955 493 aa13.78□□□□□ -0.2
SNRPA1-213ENST00000560856 RPS4Y1P22090 263 aaKnown RBP13.78□□□□□ -0.2
SNRPA1-213ENST00000560856 HTR1EP28566 365 aa13.78□□□□□ -0.2
SNRPA1-213ENST00000560856 P2RX1P51575 399 aa13.78□□□□□ -0.2
SNRPA1-213ENST00000560856 TPD52P55327 224 aaPredicted RBP13.78□□□□□ -0.2
SNRPA1-213ENST00000560856 SUMO3P55854 103 aaPredicted RBP13.78□□□□□ -0.2
SNRPA1-213ENST00000560856 CLDN20P56880 219 aa13.78□□□□□ -0.2
SNRPA1-213ENST00000560856 SRYQ05066 204 aa13.78□□□□□ -0.2
SNRPA1-213ENST00000560856 TFF3Q07654 80 aa13.78□□□□□ -0.2
SNRPA1-213ENST00000560856 SKP2Q13309 424 aa13.78□□□□□ -0.2
SNRPA1-213ENST00000560856 TOMM34Q15785 309 aaPredicted RBP13.78□□□□□ -0.2
SNRPA1-213ENST00000560856 SP5Q6BEB4 398 aaPredicted RBP13.78□□□□□ -0.2
SNRPA1-213ENST00000560856 POMZP3Q6PJE2 187 aa13.78□□□□□ -0.2
SNRPA1-213ENST00000560856 DLEU7Q6UYE1 221 aa13.78□□□□□ -0.2
SNRPA1-213ENST00000560856 RETREG3Q86VR2 466 aa13.78□□□□□ -0.2
SNRPA1-213ENST00000560856 LACC1Q8IV20 430 aa13.78□□□□□ -0.2
SNRPA1-213ENST00000560856 C10orf111Q8N326 155 aa13.78□□□□□ -0.2
SNRPA1-213ENST00000560856 ZNF614Q8N883 585 aa13.78□□□□□ -0.2
SNRPA1-213ENST00000560856 ACBD4Q8NC06 268 aa13.78□□□□□ -0.2
SNRPA1-213ENST00000560856 TNIP2Q8NFZ5 429 aa13.78□□□□□ -0.2
SNRPA1-213ENST00000560856 OR10Q1Q8NGQ4 319 aa13.78□□□□□ -0.2
SNRPA1-213ENST00000560856 MBD3L2Q8NHZ7 208 aaPredicted RBP13.78□□□□□ -0.2
SNRPA1-213ENST00000560856 GPR119Q8TDV5 335 aa13.78□□□□□ -0.2
SNRPA1-213ENST00000560856 ARSGQ96EG1 525 aa13.78□□□□□ -0.2
SNRPA1-213ENST00000560856 PIGQQ9BRB3 760 aa13.78□□□□□ -0.2
SNRPA1-213ENST00000560856 UCK2Q9BZX2 261 aa13.78□□□□□ -0.2
SNRPA1-213ENST00000560856 LAT2Q9GZY6 243 aa13.78□□□□□ -0.2
SNRPA1-213ENST00000560856 QRSL1Q9H0R6 528 aaKnown RBP13.78□□□□□ -0.2
SNRPA1-213ENST00000560856 RABEP2Q9H5N1 569 aa13.78□□□□□ -0.2
SNRPA1-213ENST00000560856 COQ3Q9NZJ6 369 aa13.78□□□□□ -0.2
SNRPA1-213ENST00000560856 VAPAQ9P0L0 249 aa13.78□□□□□ -0.2
SNRPA1-213ENST00000560856 TRIM33Q9UPN9 1127 aa13.78□□□□□ -0.2
SNRPA1-213ENST00000560856 L3MBTL1Q9Y468 752 aa13.78□□□□□ -0.2
SNRPA1-213ENST00000560856 CRYBG3Q68DQ2 2970 aa13.78□□□□□ -0.2
SNRPA1-213ENST00000560856 H3BNH8 94 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms