RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 HLA-DQB1P01920 261 aa6.27□□□□□ -1.41
TSPAN3-209ENST00000560715 F7P08709 466 aaPredicted RBP6.27□□□□□ -1.41
TSPAN3-209ENST00000560715 RNF224P0DH78 156 aa6.27□□□□□ -1.41
TSPAN3-209ENST00000560715 OR8G3PP0DMU2 310 aa6.27□□□□□ -1.41
TSPAN3-209ENST00000560715 ZNF37AP17032 561 aaPredicted RBP6.27□□□□□ -1.41
TSPAN3-209ENST00000560715 GGT1P19440 569 aa6.27□□□□□ -1.41
TSPAN3-209ENST00000560715 ITGB8P26012 769 aa6.27□□□□□ -1.41
TSPAN3-209ENST00000560715 C21orf33P30042 268 aaPredicted RBP6.27□□□□□ -1.41
TSPAN3-209ENST00000560715 POU3F4P49335 361 aa6.27□□□□□ -1.41
TSPAN3-209ENST00000560715 RORCP51449 518 aa6.27□□□□□ -1.41
TSPAN3-209ENST00000560715 P2RY4P51582 365 aa6.27□□□□□ -1.41
TSPAN3-209ENST00000560715 ATP12AP54707 1039 aa6.27□□□□□ -1.41
TSPAN3-209ENST00000560715 DUSP2Q05923 314 aa6.27□□□□□ -1.41
TSPAN3-209ENST00000560715 EMC2Q15006 297 aa6.27□□□□□ -1.41
TSPAN3-209ENST00000560715 ZNF528Q3MIS6 628 aa6.27□□□□□ -1.41
TSPAN3-209ENST00000560715 ATP13A5Q4VNC0 1218 aa6.27□□□□□ -1.41
TSPAN3-209ENST00000560715 PAN3Q58A45 887 aaKnown RBP6.27□□□□□ -1.41
TSPAN3-209ENST00000560715 DCST1Q5T197 706 aa6.27□□□□□ -1.41
TSPAN3-209ENST00000560715 PMS2CLQ68D20 193 aa6.27□□□□□ -1.41
TSPAN3-209ENST00000560715 SLC25A25Q6KCM7 469 aa6.27□□□□□ -1.41
TSPAN3-209ENST00000560715 BHLHB9Q6PI77 547 aa6.27□□□□□ -1.41
TSPAN3-209ENST00000560715 DEGS2Q6QHC5 323 aa6.27□□□□□ -1.41
TSPAN3-209ENST00000560715 TMEM107Q6UX40 140 aa6.27□□□□□ -1.41
TSPAN3-209ENST00000560715 ADIPOR2Q86V24 386 aa6.27□□□□□ -1.41
TSPAN3-209ENST00000560715 EIF4E3Q8N5X7 224 aaKnown RBP6.27□□□□□ -1.41
TSPAN3-209ENST00000560715 WDR36Q8NI36 951 aaKnown RBP6.27□□□□□ -1.41
TSPAN3-209ENST00000560715 PHOSPHO1Q8TCT1 267 aa6.27□□□□□ -1.41
TSPAN3-209ENST00000560715 EDARADDQ8WWZ3 215 aa6.27□□□□□ -1.41
TSPAN3-209ENST00000560715 C3orf30Q96M34 536 aa6.27□□□□□ -1.41
TSPAN3-209ENST00000560715 DIRC2Q96SL1 478 aa6.27□□□□□ -1.41
TSPAN3-209ENST00000560715 TMEM175Q9BSA9 504 aa6.27□□□□□ -1.41
TSPAN3-209ENST00000560715 MED18Q9BUE0 208 aa6.27□□□□□ -1.41
TSPAN3-209ENST00000560715 PORCNQ9H237 461 aa6.27□□□□□ -1.41
TSPAN3-209ENST00000560715 ZNF768Q9H5H4 540 aaKnown RBP6.27□□□□□ -1.41
TSPAN3-209ENST00000560715 SPACA1Q9HBV2 294 aa6.27□□□□□ -1.41
TSPAN3-209ENST00000560715 RNF181Q9P0P0 153 aa6.27□□□□□ -1.41
TSPAN3-209ENST00000560715 BTRCQ9Y297 605 aa6.27□□□□□ -1.41
TSPAN3-209ENST00000560715 STYXL1Q9Y6J8 313 aa6.27□□□□□ -1.41
TSPAN3-209ENST00000560715 COL1A2P08123 1366 aa6.27□□□□□ -1.41
TSPAN3-209ENST00000560715 ASPDHA6ND91 283 aa6.27□□□□□ -1.41
TSPAN3-209ENST00000560715 FABP12A6NFH5 140 aa6.27□□□□□ -1.41
TSPAN3-209ENST00000560715 C2orf74A8MZ97 194 aa6.27□□□□□ -1.41
TSPAN3-209ENST00000560715 AIPO00170 330 aa6.27□□□□□ -1.41
TSPAN3-209ENST00000560715 LGALS8O00214 317 aa6.27□□□□□ -1.41
TSPAN3-209ENST00000560715 SLC28A1O00337 649 aa6.27□□□□□ -1.41
TSPAN3-209ENST00000560715 EIF4EBP3O60516 100 aaPredicted RBP6.27□□□□□ -1.41
TSPAN3-209ENST00000560715 PIGRP01833 764 aa6.27□□□□□ -1.41
TSPAN3-209ENST00000560715 C9P02748 559 aa6.27□□□□□ -1.41
TSPAN3-209ENST00000560715 IL6P05231 212 aa6.27□□□□□ -1.41
TSPAN3-209ENST00000560715 ADRB1P08588 477 aa6.27□□□□□ -1.41
TSPAN3-209ENST00000560715 PRKAR1AP10644 381 aa6.27□□□□□ -1.41
TSPAN3-209ENST00000560715 TNNI1P19237 187 aa6.27□□□□□ -1.41
TSPAN3-209ENST00000560715 ARL2P36404 184 aa6.27□□□□□ -1.41
TSPAN3-209ENST00000560715 KHKP50053 298 aa6.27□□□□□ -1.41
TSPAN3-209ENST00000560715 PSMD4P55036 377 aaKnown RBP6.27□□□□□ -1.41
TSPAN3-209ENST00000560715 SOX10P56693 466 aa6.27□□□□□ -1.41
TSPAN3-209ENST00000560715 SP4Q02446 784 aa6.27□□□□□ -1.41
TSPAN3-209ENST00000560715 C2orf80Q0P641 193 aa6.27□□□□□ -1.41
TSPAN3-209ENST00000560715 FCN2Q15485 313 aa6.27□□□□□ -1.41
TSPAN3-209ENST00000560715 FAM83EQ2M2I3 478 aa6.27□□□□□ -1.41
TSPAN3-209ENST00000560715 VWC2Q2TAL6 325 aa6.27□□□□□ -1.41
TSPAN3-209ENST00000560715 HIKESHIQ53FT3 197 aa6.27□□□□□ -1.41
TSPAN3-209ENST00000560715 C6orf136Q5SQH8 315 aa6.27□□□□□ -1.41
TSPAN3-209ENST00000560715 BSPRYQ5W0U4 402 aa6.27□□□□□ -1.41
TSPAN3-209ENST00000560715 LRRC66Q68CR7 880 aa6.27□□□□□ -1.41
TSPAN3-209ENST00000560715 ANKRD16Q6P6B7 361 aa6.27□□□□□ -1.41
TSPAN3-209ENST00000560715 ENPP6Q6UWR7 440 aa6.27□□□□□ -1.41
TSPAN3-209ENST00000560715 HAPLN4Q86UW8 402 aa6.27□□□□□ -1.41
TSPAN3-209ENST00000560715 CYP4Z1Q86W10 505 aa6.27□□□□□ -1.41
TSPAN3-209ENST00000560715 FAM86B1Q8N7N1 296 aa6.27□□□□□ -1.41
TSPAN3-209ENST00000560715 PIGKQ92643 395 aa6.27□□□□□ -1.41
TSPAN3-209ENST00000560715 HGDQ93099 445 aa6.27□□□□□ -1.41
TSPAN3-209ENST00000560715 ISG20Q96AZ6 181 aaKnown RBP6.27□□□□□ -1.41
TSPAN3-209ENST00000560715 TMEM186Q96B77 213 aa6.27□□□□□ -1.41
TSPAN3-209ENST00000560715 CREB3L1Q96BA8 519 aa6.27□□□□□ -1.41
TSPAN3-209ENST00000560715 NXPE2Q96DL1 559 aa6.27□□□□□ -1.41
TSPAN3-209ENST00000560715 SLCO5A1Q9H2Y9 848 aa6.27□□□□□ -1.41
TSPAN3-209ENST00000560715 GAREM1Q9H706 876 aa6.27□□□□□ -1.41
TSPAN3-209ENST00000560715 PSORS1C1Q9UIG5 152 aa6.27□□□□□ -1.41
TSPAN3-209ENST00000560715 SLC25A13Q9UJS0 675 aa6.27□□□□□ -1.41
TSPAN3-209ENST00000560715 A0A1W2PN81 502 aa6.26□□□□□ -1.41
TSPAN3-209ENST00000560715 FITM1A5D6W6 292 aa6.26□□□□□ -1.41
TSPAN3-209ENST00000560715 INMT-MINDY4F8WBC2 141 aa6.26□□□□□ -1.41
TSPAN3-209ENST00000560715 CNMDO75829 334 aa6.26□□□□□ -1.41
TSPAN3-209ENST00000560715 SIX3O95343 332 aaPredicted RBP6.26□□□□□ -1.41
TSPAN3-209ENST00000560715 S100A8P05109 93 aa6.26□□□□□ -1.41
TSPAN3-209ENST00000560715 TSPAN19P0C672 248 aa6.26□□□□□ -1.41
TSPAN3-209ENST00000560715 ZNF806P0C7X5 589 aa6.26□□□□□ -1.41
TSPAN3-209ENST00000560715 ANXA3P12429 323 aa6.26□□□□□ -1.41
TSPAN3-209ENST00000560715 PRF1P14222 555 aa6.26□□□□□ -1.41
TSPAN3-209ENST00000560715 TSPAN8P19075 237 aa6.26□□□□□ -1.41
TSPAN3-209ENST00000560715 UBA1P22314 1058 aaKnown RBP6.26□□□□□ -1.41
TSPAN3-209ENST00000560715 SSTR2P30874 369 aa6.26□□□□□ -1.41
TSPAN3-209ENST00000560715 CHRNA7P36544 502 aa6.26□□□□□ -1.41
TSPAN3-209ENST00000560715 RPS19P39019 145 aaKnown RBP6.26□□□□□ -1.41
TSPAN3-209ENST00000560715 SLC6A11P48066 632 aa6.26□□□□□ -1.41
TSPAN3-209ENST00000560715 PCP4P48539 62 aa6.26□□□□□ -1.41
TSPAN3-209ENST00000560715 PRMT2P55345 433 aa6.26□□□□□ -1.41
TSPAN3-209ENST00000560715 BTG1P62324 171 aa6.26□□□□□ -1.41
TSPAN3-209ENST00000560715 RCAN2Q14206 197 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms