RNA–Protein interactions for RNA: ENST00000560637.5

VPS13C-209, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 1 (best)

Gene VPS13C, Length 3,684 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-209ENST00000560637 GALNT18Q6P9A2 607 aa5.03□□□□□ -1.6
VPS13C-209ENST00000560637 OGFOD3Q6PK18 319 aa5.03□□□□□ -1.6
VPS13C-209ENST00000560637 ZNF550Q7Z398 422 aa5.03□□□□□ -1.6
VPS13C-209ENST00000560637 ZAR1Q86SH2 424 aa5.03□□□□□ -1.6
VPS13C-209ENST00000560637 PRSS33Q8NF86 280 aa5.03□□□□□ -1.6
VPS13C-209ENST00000560637 TOR1AIP2Q8NFQ8 470 aa5.03□□□□□ -1.6
VPS13C-209ENST00000560637 SDF2Q99470 211 aa5.03□□□□□ -1.6
VPS13C-209ENST00000560637 RBM4BQ9BQ04 359 aaKnown RBP5.03□□□□□ -1.6
VPS13C-209ENST00000560637 MENTQ9BUN1 341 aa5.03□□□□□ -1.6
VPS13C-209ENST00000560637 RBM4Q9BWF3 364 aaKnown RBP5.03□□□□□ -1.6
VPS13C-209ENST00000560637 TOR3AQ9H497 397 aa5.03□□□□□ -1.6
VPS13C-209ENST00000560637 ZNF768Q9H5H4 540 aaKnown RBP5.03□□□□□ -1.6
VPS13C-209ENST00000560637 CCDC86Q9H6F5 360 aaKnown RBP5.03□□□□□ -1.6
VPS13C-209ENST00000560637 CLN6Q9NWW5 311 aa5.03□□□□□ -1.6
VPS13C-209ENST00000560637 KLHL13Q9P2N7 655 aa5.03□□□□□ -1.6
VPS13C-209ENST00000560637 NXT1Q9UKK6 140 aaKnown RBP5.03□□□□□ -1.6
VPS13C-209ENST00000560637 RALYQ9UKM9 306 aaKnown RBP5.03□□□□□ -1.6
VPS13C-209ENST00000560637 C15orf41Q9Y2V0 281 aa5.03□□□□□ -1.6
VPS13C-209ENST00000560637 ZNF407Q9C0G0 2248 aa5.03□□□□□ -1.6
VPS13C-209ENST00000560637 ARID1AO14497 2285 aa5.03□□□□□ -1.6
VPS13C-209ENST00000560637 IGHV3-15A0A0B4J1V0 119 aa5.03□□□□□ -1.6
VPS13C-209ENST00000560637 A0A0G2JPF8 293 aa5.03□□□□□ -1.6
VPS13C-209ENST00000560637 CIB4A0PJX0 185 aa5.03□□□□□ -1.6
VPS13C-209ENST00000560637 HNRNPCL3B7ZW38 293 aa5.03□□□□□ -1.6
VPS13C-209ENST00000560637 SULT2B1O00204 365 aa5.03□□□□□ -1.6
VPS13C-209ENST00000560637 CDX4O14627 284 aaPredicted RBP5.03□□□□□ -1.6
VPS13C-209ENST00000560637 ZNF264O43296 627 aa5.03□□□□□ -1.6
VPS13C-209ENST00000560637 KCNK2O95069 426 aa5.03□□□□□ -1.6
VPS13C-209ENST00000560637 CLPTM1O96005 669 aa5.03□□□□□ -1.6
VPS13C-209ENST00000560637 HNRNPCL4P0DMR1 293 aa5.03□□□□□ -1.6
VPS13C-209ENST00000560637 ARAFP10398 606 aa5.03□□□□□ -1.6
VPS13C-209ENST00000560637 ABOP16442 354 aa5.03□□□□□ -1.6
VPS13C-209ENST00000560637 STT3AP46977 705 aa5.03□□□□□ -1.6
VPS13C-209ENST00000560637 MEP1AQ16819 746 aa5.03□□□□□ -1.6
VPS13C-209ENST00000560637 LCN10Q6JVE6 187 aa5.03□□□□□ -1.6
VPS13C-209ENST00000560637 ERMP1Q7Z2K6 904 aa5.03□□□□□ -1.6
VPS13C-209ENST00000560637 KMT5CQ86Y97 462 aa5.03□□□□□ -1.6
VPS13C-209ENST00000560637 APLFQ8IW19 511 aaPredicted RBP5.03□□□□□ -1.6
VPS13C-209ENST00000560637 BCORP1Q8N888 145 aa5.03□□□□□ -1.6
VPS13C-209ENST00000560637 OR1J4Q8NGS1 313 aa5.03□□□□□ -1.6
VPS13C-209ENST00000560637 OR5K1Q8NHB7 308 aa5.03□□□□□ -1.6
VPS13C-209ENST00000560637 CNIH3Q8TBE1 160 aa5.03□□□□□ -1.6
VPS13C-209ENST00000560637 TMEM234Q8WY98 164 aa5.03□□□□□ -1.6
VPS13C-209ENST00000560637 TMEM203Q969S6 136 aa5.03□□□□□ -1.6
VPS13C-209ENST00000560637 VOPP1Q96AW1 172 aa5.03□□□□□ -1.6
VPS13C-209ENST00000560637 NMD3Q96D46 503 aaKnown RBP5.03□□□□□ -1.6
VPS13C-209ENST00000560637 NEURL3Q96EH8 262 aa5.03□□□□□ -1.6
VPS13C-209ENST00000560637 LOXL4Q96JB6 756 aa5.03□□□□□ -1.6
VPS13C-209ENST00000560637 CEP19Q96LK0 163 aa5.03□□□□□ -1.6
VPS13C-209ENST00000560637 SLC46A1Q96NT5 459 aa5.03□□□□□ -1.6
VPS13C-209ENST00000560637 PIGUQ9H490 435 aa5.03□□□□□ -1.6
VPS13C-209ENST00000560637 NT5DC2Q9H857 520 aa5.03□□□□□ -1.6
VPS13C-209ENST00000560637 PAPOLBQ9NRJ5 636 aaKnown RBP5.03□□□□□ -1.6
VPS13C-209ENST00000560637 ARMC1Q9NVT9 282 aa5.03□□□□□ -1.6
VPS13C-209ENST00000560637 ZNF443Q9Y2A4 671 aaPredicted RBP5.03□□□□□ -1.6
VPS13C-209ENST00000560637 WBP11Q9Y2W2 641 aaKnown RBP5.03□□□□□ -1.6
VPS13C-209ENST00000560637 MMACHCQ9Y4U1 282 aa5.03□□□□□ -1.6
VPS13C-209ENST00000560637 A0A1W2PPL8 197 aa5.02□□□□□ -1.61
VPS13C-209ENST00000560637 SNTNA6NMZ2 147 aa5.02□□□□□ -1.61
VPS13C-209ENST00000560637 ENO4A6NNW6 628 aa5.02□□□□□ -1.61
VPS13C-209ENST00000560637 C3orf80F5H4A9 247 aa5.02□□□□□ -1.61
VPS13C-209ENST00000560637 ACOT7O00154 380 aa5.02□□□□□ -1.61
VPS13C-209ENST00000560637 DOK2O60496 412 aa5.02□□□□□ -1.61
VPS13C-209ENST00000560637 UGT2B11O75310 529 aa5.02□□□□□ -1.61
VPS13C-209ENST00000560637 SEC14L2O76054 403 aa5.02□□□□□ -1.61
VPS13C-209ENST00000560637 FBXO45P0C2W1 286 aa5.02□□□□□ -1.61
VPS13C-209ENST00000560637 ACADSP16219 412 aa5.02□□□□□ -1.61
VPS13C-209ENST00000560637 POU3F2P20265 443 aaPredicted RBP5.02□□□□□ -1.61
VPS13C-209ENST00000560637 FPR1P21462 350 aa5.02□□□□□ -1.61
VPS13C-209ENST00000560637 PLA2G5P39877 138 aa5.02□□□□□ -1.61
VPS13C-209ENST00000560637 ATP12AP54707 1039 aa5.02□□□□□ -1.61
VPS13C-209ENST00000560637 ERVK-25P63136 954 aa5.02□□□□□ -1.61
VPS13C-209ENST00000560637 GALK2Q01415 458 aa5.02□□□□□ -1.61
VPS13C-209ENST00000560637 TRAP1Q12931 704 aaKnown RBP5.02□□□□□ -1.61
VPS13C-209ENST00000560637 OCLNQ16625 522 aa5.02□□□□□ -1.61
VPS13C-209ENST00000560637 MPEG1Q2M385 716 aa5.02□□□□□ -1.61
VPS13C-209ENST00000560637 CPZQ66K79 652 aa5.02□□□□□ -1.61
VPS13C-209ENST00000560637 ZNF585AQ6P3V2 769 aa5.02□□□□□ -1.61
VPS13C-209ENST00000560637 AAGABQ6PD74 315 aa5.02□□□□□ -1.61
VPS13C-209ENST00000560637 PRICKLE2Q7Z3G6 844 aa5.02□□□□□ -1.61
VPS13C-209ENST00000560637 KBTBD2Q8IY47 623 aa5.02□□□□□ -1.61
VPS13C-209ENST00000560637 SETD9Q8NE22 299 aa5.02□□□□□ -1.61
VPS13C-209ENST00000560637 OR51G2Q8NGK0 314 aa5.02□□□□□ -1.61
VPS13C-209ENST00000560637 C1orf216Q8TAB5 229 aa5.02□□□□□ -1.61
VPS13C-209ENST00000560637 THEM6Q8WUY1 208 aa5.02□□□□□ -1.61
VPS13C-209ENST00000560637 HTRA1Q92743 480 aa5.02□□□□□ -1.61
VPS13C-209ENST00000560637 SAMD8Q96LT4 415 aa5.02□□□□□ -1.61
VPS13C-209ENST00000560637 ZNF347Q96SE7 839 aa5.02□□□□□ -1.61
VPS13C-209ENST00000560637 PIP5K1AQ99755 562 aa5.02□□□□□ -1.61
VPS13C-209ENST00000560637 EMC6Q9BV81 110 aa5.02□□□□□ -1.61
VPS13C-209ENST00000560637 UCK2Q9BZX2 261 aa5.02□□□□□ -1.61
VPS13C-209ENST00000560637 C19orf53Q9UNZ5 99 aaPredicted RBP5.02□□□□□ -1.61
VPS13C-209ENST00000560637 POLHQ9Y253 713 aa5.02□□□□□ -1.61
VPS13C-209ENST00000560637 SLC6A5Q9Y345 797 aa5.02□□□□□ -1.61
VPS13C-209ENST00000560637 ENPP4Q9Y6X5 453 aa5.02□□□□□ -1.61
VPS13C-209ENST00000560637 MPDZO75970 2070 aa5.02□□□□□ -1.61
VPS13C-209ENST00000560637 GBF1Q92538 1859 aa5.02□□□□□ -1.61
VPS13C-209ENST00000560637 TRBV4-1A0A0J9YWV2 114 aa5.02□□□□□ -1.61
VPS13C-209ENST00000560637 SERINC4A6NH21 518 aa5.02□□□□□ -1.61
VPS13C-209ENST00000560637 IFNGP01579 166 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 174 ms