RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 PINK1Q9BXM7 581 aa2.99□□□□□ -1.93
SPG11-218ENST00000559754 STRADBQ9C0K7 418 aa2.99□□□□□ -1.93
SPG11-218ENST00000559754 HOXD1Q9GZZ0 328 aa2.99□□□□□ -1.93
SPG11-218ENST00000559754 COMMD4Q9H0A8 199 aa2.99□□□□□ -1.93
SPG11-218ENST00000559754 SLC25A51Q9H1U9 297 aa2.99□□□□□ -1.93
SPG11-218ENST00000559754 TMEM185BQ9H7F4 350 aa2.99□□□□□ -1.93
SPG11-218ENST00000559754 GPN2Q9H9Y4 310 aaPredicted RBP2.99□□□□□ -1.93
SPG11-218ENST00000559754 PEF1Q9UBV8 284 aaKnown RBP2.99□□□□□ -1.93
SPG11-218ENST00000559754 PISDQ9UG56 409 aa2.99□□□□□ -1.93
SPG11-218ENST00000559754 DHRS7Q9Y394 339 aa2.99□□□□□ -1.93
SPG11-218ENST00000559754 IGLV3-10A0A075B6K4 115 aa2.98□□□□□ -1.93
SPG11-218ENST00000559754 PPIAL4EA0A075B759 164 aa2.98□□□□□ -1.93
SPG11-218ENST00000559754 A0A0A6YYD4 124 aa2.98□□□□□ -1.93
SPG11-218ENST00000559754 LRIT2A6NDA9 550 aa2.98□□□□□ -1.93
SPG11-218ENST00000559754 OR5H15A6NDH6 313 aa2.98□□□□□ -1.93
SPG11-218ENST00000559754 C9JVG2 144 aa2.98□□□□□ -1.93
SPG11-218ENST00000559754 GOLGA8SH3BPF8 625 aa2.98□□□□□ -1.93
SPG11-218ENST00000559754 KIF2AO00139 706 aaPredicted RBP2.98□□□□□ -1.93
SPG11-218ENST00000559754 PDLIM1O00151 329 aa2.98□□□□□ -1.93
SPG11-218ENST00000559754 ABCD4O14678 606 aa2.98□□□□□ -1.93
SPG11-218ENST00000559754 EI24O14681 340 aa2.98□□□□□ -1.93
SPG11-218ENST00000559754 POLR3GO15318 223 aaPredicted RBP2.98□□□□□ -1.93
SPG11-218ENST00000559754 SIGLEC5O15389 551 aa2.98□□□□□ -1.93
SPG11-218ENST00000559754 RNF113AO15541 343 aaKnown RBP2.98□□□□□ -1.93
SPG11-218ENST00000559754 N4BP1O75113 896 aaKnown RBP2.98□□□□□ -1.93
SPG11-218ENST00000559754 CALCAP01258 141 aa2.98□□□□□ -1.93
SPG11-218ENST00000559754 FHP07954 510 aa2.98□□□□□ -1.93
SPG11-218ENST00000559754 PPIAL4FP0DN26 164 aa2.98□□□□□ -1.93
SPG11-218ENST00000559754 AOC1P19801 751 aa2.98□□□□□ -1.93
SPG11-218ENST00000559754 CYP2B6P20813 491 aa2.98□□□□□ -1.93
SPG11-218ENST00000559754 NMT1P30419 496 aaKnown RBP2.98□□□□□ -1.93
SPG11-218ENST00000559754 BMI1P35226 326 aa2.98□□□□□ -1.93
SPG11-218ENST00000559754 ANP32AP39687 249 aaKnown RBP2.98□□□□□ -1.93
SPG11-218ENST00000559754 SLC1A4P43007 532 aa2.98□□□□□ -1.93
SPG11-218ENST00000559754 RAB9AP51151 201 aa2.98□□□□□ -1.93
SPG11-218ENST00000559754 XGP55808 180 aa2.98□□□□□ -1.93
SPG11-218ENST00000559754 C21orf59P57076 290 aa2.98□□□□□ -1.93
SPG11-218ENST00000559754 RPS15P62841 145 aaKnown RBP2.98□□□□□ -1.93
SPG11-218ENST00000559754 MECOMQ03112 1051 aa2.98□□□□□ -1.93
SPG11-218ENST00000559754 BST2Q10589 180 aaKnown RBP2.98□□□□□ -1.93
SPG11-218ENST00000559754 MTF1Q14872 753 aa2.98□□□□□ -1.93
SPG11-218ENST00000559754 TAB1Q15750 504 aa2.98□□□□□ -1.93
SPG11-218ENST00000559754 CYBRD1Q53TN4 286 aa2.98□□□□□ -1.93
SPG11-218ENST00000559754 TCHHL1Q5QJ38 904 aaPredicted RBP2.98□□□□□ -1.93
SPG11-218ENST00000559754 PIP5KL1Q5T9C9 394 aa2.98□□□□□ -1.93
SPG11-218ENST00000559754 ATRAIDQ6UW56 229 aa2.98□□□□□ -1.93
SPG11-218ENST00000559754 CCDC80Q76M96 950 aa2.98□□□□□ -1.93
SPG11-218ENST00000559754 KIAA1328Q86T90 577 aa2.98□□□□□ -1.93
SPG11-218ENST00000559754 OR4N5Q8IXE1 308 aa2.98□□□□□ -1.93
SPG11-218ENST00000559754 OFCC1Q8IZS5 231 aa2.98□□□□□ -1.93
SPG11-218ENST00000559754 Q8N9G6 341 aaPredicted RBP2.98□□□□□ -1.93
SPG11-218ENST00000559754 SPERTQ8NA61 448 aa2.98□□□□□ -1.93
SPG11-218ENST00000559754 STXBP6Q8NFX7 210 aa2.98□□□□□ -1.93
SPG11-218ENST00000559754 OR1F12Q8NHA8 337 aa2.98□□□□□ -1.93
SPG11-218ENST00000559754 LIPHQ8WWY8 451 aa2.98□□□□□ -1.93
SPG11-218ENST00000559754 TSNARE1Q96NA8 513 aa2.98□□□□□ -1.93
SPG11-218ENST00000559754 COPS8Q99627 209 aa2.98□□□□□ -1.93
SPG11-218ENST00000559754 CITED1Q99966 193 aa2.98□□□□□ -1.93
SPG11-218ENST00000559754 C19orf43Q9BQ61 176 aa2.98□□□□□ -1.93
SPG11-218ENST00000559754 BPIFA3Q9BQP9 254 aa2.98□□□□□ -1.93
SPG11-218ENST00000559754 APOOQ9BUR5 198 aa2.98□□□□□ -1.93
SPG11-218ENST00000559754 GLT8D2Q9H1C3 349 aa2.98□□□□□ -1.93
SPG11-218ENST00000559754 LRRN3Q9H3W5 708 aa2.98□□□□□ -1.93
SPG11-218ENST00000559754 TDRD3Q9H7E2 651 aaKnown RBP2.98□□□□□ -1.93
SPG11-218ENST00000559754 NRN1Q9NPD7 142 aa2.98□□□□□ -1.93
SPG11-218ENST00000559754 DUS2Q9NX74 493 aaKnown RBP2.98□□□□□ -1.93
SPG11-218ENST00000559754 KLHL28Q9NXS3 571 aa2.98□□□□□ -1.93
SPG11-218ENST00000559754 MRPL39Q9NYK5 338 aaKnown RBP2.98□□□□□ -1.93
SPG11-218ENST00000559754 ZMAT5Q9UDW3 170 aaKnown RBP2.98□□□□□ -1.93
SPG11-218ENST00000559754 CYTH4Q9UIA0 394 aa2.98□□□□□ -1.93
SPG11-218ENST00000559754 PPIAL4AQ9Y536 164 aa2.98□□□□□ -1.93
SPG11-218ENST00000559754 COMMD3-BMI1R4GMX3 469 aa2.98□□□□□ -1.93
SPG11-218ENST00000559754 CLSPNQ9HAW4 1339 aa2.97□□□□□ -1.93
SPG11-218ENST00000559754 A0A0J9YVX5 310 aa2.97□□□□□ -1.93
SPG11-218ENST00000559754 A0A1B0GVL5 298 aa2.97□□□□□ -1.93
SPG11-218ENST00000559754 BTBD17A6NE02 478 aa2.97□□□□□ -1.93
SPG11-218ENST00000559754 ACOD1A6NK06 481 aa2.97□□□□□ -1.93
SPG11-218ENST00000559754 OR2AG2A6NM03 316 aa2.97□□□□□ -1.93
SPG11-218ENST00000559754 A8MXK9 166 aa2.97□□□□□ -1.93
SPG11-218ENST00000559754 CYB561D2O14569 222 aa2.97□□□□□ -1.93
SPG11-218ENST00000559754 STX11O75558 287 aa2.97□□□□□ -1.93
SPG11-218ENST00000559754 IGSF6O95976 241 aa2.97□□□□□ -1.93
SPG11-218ENST00000559754 IVLP07476 585 aa2.97□□□□□ -1.93
SPG11-218ENST00000559754 H2BFMP0C1H6 154 aa2.97□□□□□ -1.93
SPG11-218ENST00000559754 UBTFL6P0CB48 400 aaPredicted RBP2.97□□□□□ -1.93
SPG11-218ENST00000559754 MYOGP15173 224 aa2.97□□□□□ -1.93
SPG11-218ENST00000559754 NCK1P16333 377 aa2.97□□□□□ -1.93
SPG11-218ENST00000559754 CD9P21926 228 aa2.97□□□□□ -1.93
SPG11-218ENST00000559754 CPN2P22792 545 aa2.97□□□□□ -1.93
SPG11-218ENST00000559754 CD1BP29016 333 aa2.97□□□□□ -1.93
SPG11-218ENST00000559754 CASP14P31944 242 aa2.97□□□□□ -1.93
SPG11-218ENST00000559754 OTX1P32242 354 aaPredicted RBP2.97□□□□□ -1.93
SPG11-218ENST00000559754 UGT1A5P35504 534 aa2.97□□□□□ -1.93
SPG11-218ENST00000559754 SOX3P41225 446 aa2.97□□□□□ -1.93
SPG11-218ENST00000559754 MAGEA5P43359 124 aa2.97□□□□□ -1.93
SPG11-218ENST00000559754 SLC11A1P49279 550 aa2.97□□□□□ -1.93
SPG11-218ENST00000559754 EMDP50402 254 aa2.97□□□□□ -1.93
SPG11-218ENST00000559754 EFNB2P52799 333 aa2.97□□□□□ -1.93
SPG11-218ENST00000559754 HADHBP55084 474 aaKnown RBP2.97□□□□□ -1.93
SPG11-218ENST00000559754 RAG2P55895 527 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms