RNA–Protein interactions for RNA: ENST00000559276.5

USP3-212, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-212ENST00000559276 ANKRD53Q8N9V6 530 aa5.42□□□□□ -1.54
USP3-212ENST00000559276 POC5Q8NA72 575 aa5.42□□□□□ -1.54
USP3-212ENST00000559276 CAMKVQ8NCB2 501 aa5.42□□□□□ -1.54
USP3-212ENST00000559276 APCDD1LQ8NCL9 501 aa5.42□□□□□ -1.54
USP3-212ENST00000559276 ZNF540Q8NDQ6 660 aa5.42□□□□□ -1.54
USP3-212ENST00000559276 OR56A3Q8NH54 315 aa5.42□□□□□ -1.54
USP3-212ENST00000559276 OR10A6Q8NH74 314 aa5.42□□□□□ -1.54
USP3-212ENST00000559276 PSMA8Q8TAA3 256 aa5.42□□□□□ -1.54
USP3-212ENST00000559276 SUN3Q8TAQ9 357 aa5.42□□□□□ -1.54
USP3-212ENST00000559276 FBXO30Q8TB52 745 aa5.42□□□□□ -1.54
USP3-212ENST00000559276 PYCR2Q96C36 320 aa5.42□□□□□ -1.54
USP3-212ENST00000559276 MTFMTQ96DP5 389 aaKnown RBP5.42□□□□□ -1.54
USP3-212ENST00000559276 LINGO1Q96FE5 620 aa5.42□□□□□ -1.54
USP3-212ENST00000559276 SMIM10Q96HG1 83 aa5.42□□□□□ -1.54
USP3-212ENST00000559276 HRASLS5Q96KN8 279 aa5.42□□□□□ -1.54
USP3-212ENST00000559276 COL21A1Q96P44 957 aa5.42□□□□□ -1.54
USP3-212ENST00000559276 OR1F2PQ96R84 312 aa5.42□□□□□ -1.54
USP3-212ENST00000559276 UTP23Q9BRU9 249 aaKnown RBP5.42□□□□□ -1.54
USP3-212ENST00000559276 KLHL31Q9H511 634 aa5.42□□□□□ -1.54
USP3-212ENST00000559276 CDCP1Q9H5V8 836 aa5.42□□□□□ -1.54
USP3-212ENST00000559276 REEP1Q9H902 201 aa5.42□□□□□ -1.54
USP3-212ENST00000559276 LRTM1Q9HBL6 345 aa5.42□□□□□ -1.54
USP3-212ENST00000559276 FKBP14Q9NWM8 211 aa5.42□□□□□ -1.54
USP3-212ENST00000559276 CNOT2Q9NZN8 540 aaKnown RBP5.42□□□□□ -1.54
USP3-212ENST00000559276 SLAMF8Q9P0V8 285 aa5.42□□□□□ -1.54
USP3-212ENST00000559276 KIF17Q9P2E2 1029 aa5.42□□□□□ -1.54
USP3-212ENST00000559276 ERVK-18Q9QC07 812 aa5.42□□□□□ -1.54
USP3-212ENST00000559276 OPTCQ9UBM4 332 aa5.42□□□□□ -1.54
USP3-212ENST00000559276 C19orf25Q9UFG5 118 aaPredicted RBP5.42□□□□□ -1.54
USP3-212ENST00000559276 TEKT2Q9UIF3 430 aa5.42□□□□□ -1.54
USP3-212ENST00000559276 ZNF223Q9UK11 482 aaPredicted RBP5.42□□□□□ -1.54
USP3-212ENST00000559276 ZNF221Q9UK13 617 aa5.42□□□□□ -1.54
USP3-212ENST00000559276 RNF6Q9Y252 685 aa5.42□□□□□ -1.54
USP3-212ENST00000559276 OARD1Q9Y530 152 aa5.42□□□□□ -1.54
USP3-212ENST00000559276 POLR3HQ9Y535 204 aaPredicted RBP5.42□□□□□ -1.54
USP3-212ENST00000559276 TIMM22Q9Y584 194 aa5.42□□□□□ -1.54
USP3-212ENST00000559276 PCDHGB3Q9Y5G1 929 aa5.42□□□□□ -1.54
USP3-212ENST00000559276 HRNRQ86YZ3 2850 aaPredicted RBP5.41□□□□□ -1.54
USP3-212ENST00000559276 TCRBV16S1A1N1A0A5B0 115 aa5.41□□□□□ -1.54
USP3-212ENST00000559276 TRBC2A0A5B9 178 aa5.41□□□□□ -1.54
USP3-212ENST00000559276 SH3D21A4FU49 640 aa5.41□□□□□ -1.54
USP3-212ENST00000559276 ARRDC5A6NEK1 342 aa5.41□□□□□ -1.54
USP3-212ENST00000559276 LRRC14BA6NHZ5 514 aa5.41□□□□□ -1.54
USP3-212ENST00000559276 TMEM200CA6NKL6 621 aa5.41□□□□□ -1.54
USP3-212ENST00000559276 C9JVG2 144 aa5.41□□□□□ -1.54
USP3-212ENST00000559276 CDC7O00311 574 aa5.41□□□□□ -1.54
USP3-212ENST00000559276 ADAMDEC1O15204 470 aa5.41□□□□□ -1.54
USP3-212ENST00000559276 SLC16A5O15375 505 aa5.41□□□□□ -1.54
USP3-212ENST00000559276 IDH3BO43837 385 aa5.41□□□□□ -1.54
USP3-212ENST00000559276 PRKNO60260 465 aaPredicted RBP5.41□□□□□ -1.54
USP3-212ENST00000559276 B4GALT2O60909 372 aa5.41□□□□□ -1.54
USP3-212ENST00000559276 TRIM3O75382 744 aaPredicted RBP5.41□□□□□ -1.54
USP3-212ENST00000559276 ULK1O75385 1050 aa5.41□□□□□ -1.54
USP3-212ENST00000559276 SLC25A12O75746 678 aa5.41□□□□□ -1.54
USP3-212ENST00000559276 UGT2B17O75795 530 aa5.41□□□□□ -1.54
USP3-212ENST00000559276 TBX6O95947 436 aaPredicted RBP5.41□□□□□ -1.54
USP3-212ENST00000559276 SERPINA1P01009 418 aa5.41□□□□□ -1.54
USP3-212ENST00000559276 MT-ND2P03891 347 aa5.41□□□□□ -1.54
USP3-212ENST00000559276 FABP3P05413 133 aa5.41□□□□□ -1.54
USP3-212ENST00000559276 CDK1P06493 297 aa5.41□□□□□ -1.54
USP3-212ENST00000559276 C8GP07360 202 aa5.41□□□□□ -1.54
USP3-212ENST00000559276 ABCB1P08183 1280 aaPredicted RBP5.41□□□□□ -1.54
USP3-212ENST00000559276 ZNF888P0CJ79 500 aaPredicted RBP5.41□□□□□ -1.54
USP3-212ENST00000559276 PCNAP12004 261 aa5.41□□□□□ -1.54
USP3-212ENST00000559276 CD46P15529 392 aa5.41□□□□□ -1.54
USP3-212ENST00000559276 HOXB9P17482 250 aaPredicted RBP5.41□□□□□ -1.54
USP3-212ENST00000559276 ALOX12P18054 663 aa5.41□□□□□ -1.54
USP3-212ENST00000559276 MAOAP21397 527 aa5.41□□□□□ -1.54
USP3-212ENST00000559276 S100A3P33764 101 aa5.41□□□□□ -1.54
USP3-212ENST00000559276 TRHRP34981 398 aaPredicted RBP5.41□□□□□ -1.54
USP3-212ENST00000559276 DDOSTP39656 456 aa5.41□□□□□ -1.54
USP3-212ENST00000559276 RFC3P40938 356 aa5.41□□□□□ -1.54
USP3-212ENST00000559276 GPR143P51810 404 aa5.41□□□□□ -1.54
USP3-212ENST00000559276 UGT2B15P54855 530 aa5.41□□□□□ -1.54
USP3-212ENST00000559276 RIPPLY3P57055 190 aa5.41□□□□□ -1.54
USP3-212ENST00000559276 MLF1P58340 268 aa5.41□□□□□ -1.54
USP3-212ENST00000559276 ARPC4P59998 168 aa5.41□□□□□ -1.54
USP3-212ENST00000559276 VBP1P61758 197 aa5.41□□□□□ -1.54
USP3-212ENST00000559276 RPL38P63173 70 aaKnown RBP5.41□□□□□ -1.54
USP3-212ENST00000559276 RBPJQ06330 500 aa5.41□□□□□ -1.54
USP3-212ENST00000559276 TFF3Q07654 80 aa5.41□□□□□ -1.54
USP3-212ENST00000559276 SP140Q13342 867 aa5.41□□□□□ -1.54
USP3-212ENST00000559276 PGS1Q32NB8 556 aa5.41□□□□□ -1.54
USP3-212ENST00000559276 DEFB134Q4QY38 66 aa5.41□□□□□ -1.54
USP3-212ENST00000559276 EMC4Q5J8M3 183 aa5.41□□□□□ -1.54
USP3-212ENST00000559276 ZNF362Q5T0B9 420 aaPredicted RBP5.41□□□□□ -1.54
USP3-212ENST00000559276 STEAP3Q658P3 488 aa5.41□□□□□ -1.54
USP3-212ENST00000559276 SBSNQ6UWP8 590 aa5.41□□□□□ -1.54
USP3-212ENST00000559276 EIF3MQ7L2H7 374 aaKnown RBP5.41□□□□□ -1.54
USP3-212ENST00000559276 LRRC70Q7Z2Q7 622 aa5.41□□□□□ -1.54
USP3-212ENST00000559276 SLC46A3Q7Z3Q1 461 aa5.41□□□□□ -1.54
USP3-212ENST00000559276 MDGA2Q7Z553 956 aa5.41□□□□□ -1.54
USP3-212ENST00000559276 GOLGA7Q7Z5G4 137 aa5.41□□□□□ -1.54
USP3-212ENST00000559276 MILR1Q7Z6M3 343 aa5.41□□□□□ -1.54
USP3-212ENST00000559276 C17orf64Q86WR6 236 aa5.41□□□□□ -1.54
USP3-212ENST00000559276 RPS19BP1Q86WX3 136 aaKnown RBP5.41□□□□□ -1.54
USP3-212ENST00000559276 MSRB3Q8IXL7 192 aa5.41□□□□□ -1.54
USP3-212ENST00000559276 ZZZ3Q8IYH5 903 aa5.41□□□□□ -1.54
USP3-212ENST00000559276 RPRMLQ8N4K4 120 aa5.41□□□□□ -1.54
USP3-212ENST00000559276 FAM86B1Q8N7N1 296 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms