RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 CDHR4A6H8M9 788 aa9.88□□□□□ -0.83
TPM1-217ENST00000559108 HNRNPCL2B2RXH8 293 aa9.88□□□□□ -0.83
TPM1-217ENST00000559108 HNRNPCL3B7ZW38 293 aa9.88□□□□□ -0.83
TPM1-217ENST00000559108 HCRTR2O43614 444 aa9.88□□□□□ -0.83
TPM1-217ENST00000559108 EFNA2O43921 213 aa9.88□□□□□ -0.83
TPM1-217ENST00000559108 CDC40O60508 579 aaKnown RBP eCLIP9.88□□□□□ -0.83
TPM1-217ENST00000559108 HNRNPCL1O60812 293 aaKnown RBP9.88□□□□□ -0.83
TPM1-217ENST00000559108 SOX30O94993 753 aa9.88□□□□□ -0.83
TPM1-217ENST00000559108 MFN2O95140 757 aa9.88□□□□□ -0.83
TPM1-217ENST00000559108 CRYABP02511 175 aaKnown RBP9.88□□□□□ -0.83
TPM1-217ENST00000559108 LINGO3P0C6S8 592 aa9.88□□□□□ -0.83
TPM1-217ENST00000559108 UBTFL6P0CB48 400 aaPredicted RBP9.88□□□□□ -0.83
TPM1-217ENST00000559108 HNRNPCL4P0DMR1 293 aa9.88□□□□□ -0.83
TPM1-217ENST00000559108 UBL4AP11441 157 aa9.88□□□□□ -0.83
TPM1-217ENST00000559108 NID1P14543 1247 aa9.88□□□□□ -0.83
TPM1-217ENST00000559108 NCK1P16333 377 aa9.88□□□□□ -0.83
TPM1-217ENST00000559108 CD247P20963 164 aa9.88□□□□□ -0.83
TPM1-217ENST00000559108 ELAVL4P26378 380 aaKnown RBP9.88□□□□□ -0.83
TPM1-217ENST00000559108 SHC1P29353 583 aa9.88□□□□□ -0.83
TPM1-217ENST00000559108 MSX2P35548 267 aaPredicted RBP9.88□□□□□ -0.83
TPM1-217ENST00000559108 ADH7P40394 386 aa9.88□□□□□ -0.83
TPM1-217ENST00000559108 CRISP3P54108 245 aa9.88□□□□□ -0.83
TPM1-217ENST00000559108 GFRA1P56159 465 aa9.88□□□□□ -0.83
TPM1-217ENST00000559108 HPCAP84074 193 aa9.88□□□□□ -0.83
TPM1-217ENST00000559108 C17orf67Q0P5P2 114 aa9.88□□□□□ -0.83
TPM1-217ENST00000559108 CEACAM7Q14002 265 aa9.88□□□□□ -0.83
TPM1-217ENST00000559108 ZNF630Q2M218 657 aaPredicted RBP9.88□□□□□ -0.83
TPM1-217ENST00000559108 REEP3Q6NUK4 255 aa9.88□□□□□ -0.83
TPM1-217ENST00000559108 NCCRP1Q6ZVX7 275 aaPredicted RBP9.88□□□□□ -0.83
TPM1-217ENST00000559108 SLC22A16Q86VW1 577 aa9.88□□□□□ -0.83
TPM1-217ENST00000559108 IFNEQ86WN2 208 aa9.88□□□□□ -0.83
TPM1-217ENST00000559108 LACC1Q8IV20 430 aa9.88□□□□□ -0.83
TPM1-217ENST00000559108 PGAM4Q8N0Y7 254 aa9.88□□□□□ -0.83
TPM1-217ENST00000559108 FAM98AQ8NCA5 519 aaKnown RBP9.88□□□□□ -0.83
TPM1-217ENST00000559108 C11orf65Q8NCR3 313 aa9.88□□□□□ -0.83
TPM1-217ENST00000559108 HIPK4Q8NE63 616 aa9.88□□□□□ -0.83
TPM1-217ENST00000559108 OR4D11Q8NGI4 311 aa9.88□□□□□ -0.83
TPM1-217ENST00000559108 OR52P1PQ8NH57 321 aa9.88□□□□□ -0.83
TPM1-217ENST00000559108 BBS10Q8TAM1 723 aa9.88□□□□□ -0.83
TPM1-217ENST00000559108 WDR60Q8WVS4 1066 aa9.88□□□□□ -0.83
TPM1-217ENST00000559108 SLC7A6OSQ96CW6 309 aaPredicted RBP9.88□□□□□ -0.83
TPM1-217ENST00000559108 REXO5Q96IC2 774 aaKnown RBP9.88□□□□□ -0.83
TPM1-217ENST00000559108 PRR14Q9BWN1 585 aa9.88□□□□□ -0.83
TPM1-217ENST00000559108 HOXD1Q9GZZ0 328 aa9.88□□□□□ -0.83
TPM1-217ENST00000559108 MTHFD2LQ9H903 347 aaPredicted RBP9.88□□□□□ -0.83
TPM1-217ENST00000559108 GID8Q9NWU2 228 aa9.88□□□□□ -0.83
TPM1-217ENST00000559108 SUCOQ9UBS9 1254 aaKnown RBP9.88□□□□□ -0.83
TPM1-217ENST00000559108 CORO2BQ9UQ03 480 aa9.88□□□□□ -0.83
TPM1-217ENST00000559108 RPH3AQ9Y2J0 694 aaPredicted RBP9.88□□□□□ -0.83
TPM1-217ENST00000559108 POLEQ07864 2286 aa9.87□□□□□ -0.83
TPM1-217ENST00000559108 UBR5O95071 2799 aaPredicted RBP9.87□□□□□ -0.83
TPM1-217ENST00000559108 A0A1B0GVC2 190 aa9.87□□□□□ -0.83
TPM1-217ENST00000559108 B2RBV5 119 aa9.87□□□□□ -0.83
TPM1-217ENST00000559108 H0YC42 278 aa9.87□□□□□ -0.83
TPM1-217ENST00000559108 M0QX08 132 aa9.87□□□□□ -0.83
TPM1-217ENST00000559108 ACOT7O00154 380 aa9.87□□□□□ -0.83
TPM1-217ENST00000559108 ZNF264O43296 627 aa9.87□□□□□ -0.83
TPM1-217ENST00000559108 TPST2O60704 377 aa9.87□□□□□ -0.83
TPM1-217ENST00000559108 CBR3O75828 277 aa9.87□□□□□ -0.83
TPM1-217ENST00000559108 TRAPPC6AO75865 159 aa9.87□□□□□ -0.83
TPM1-217ENST00000559108 NTN1O95631 604 aa9.87□□□□□ -0.83
TPM1-217ENST00000559108 CSTAP01040 98 aa9.87□□□□□ -0.83
TPM1-217ENST00000559108 PABPC4LP0CB38 370 aaKnown RBP9.87□□□□□ -0.83
TPM1-217ENST00000559108 GKN3PP0CG01 181 aa9.87□□□□□ -0.83
TPM1-217ENST00000559108 ESRRAP11474 423 aaPredicted RBP9.87□□□□□ -0.83
TPM1-217ENST00000559108 EDN3P14138 238 aa9.87□□□□□ -0.83
TPM1-217ENST00000559108 ETS2P15036 469 aa9.87□□□□□ -0.83
TPM1-217ENST00000559108 TNFRSF1BP20333 461 aa9.87□□□□□ -0.83
TPM1-217ENST00000559108 FUT4P22083 530 aa9.87□□□□□ -0.83
TPM1-217ENST00000559108 GNLYP22749 145 aa9.87□□□□□ -0.83
TPM1-217ENST00000559108 DPP4P27487 766 aa9.87□□□□□ -0.83
TPM1-217ENST00000559108 SRD5A2P31213 254 aa9.87□□□□□ -0.83
TPM1-217ENST00000559108 ACAA2P42765 397 aaKnown RBP9.87□□□□□ -0.83
TPM1-217ENST00000559108 STARP49675 285 aa9.87□□□□□ -0.83
TPM1-217ENST00000559108 ANXA11P50995 505 aaKnown RBP9.87□□□□□ -0.83
TPM1-217ENST00000559108 ZNF136P52737 540 aa9.87□□□□□ -0.83
TPM1-217ENST00000559108 TPD52P55327 224 aaPredicted RBP9.87□□□□□ -0.83
TPM1-217ENST00000559108 CLDN15P56746 228 aa9.87□□□□□ -0.83
TPM1-217ENST00000559108 KCNJ10P78508 379 aa9.87□□□□□ -0.83
TPM1-217ENST00000559108 HOXC5Q00444 222 aa9.87□□□□□ -0.83
TPM1-217ENST00000559108 CRYZQ08257 329 aaKnown RBP9.87□□□□□ -0.83
TPM1-217ENST00000559108 C19orf57Q0VDD7 668 aa9.87□□□□□ -0.83
TPM1-217ENST00000559108 FOXF1Q12946 379 aa9.87□□□□□ -0.83
TPM1-217ENST00000559108 ART3Q13508 389 aa9.87□□□□□ -0.83
TPM1-217ENST00000559108 NPTX1Q15818 432 aa9.87□□□□□ -0.83
TPM1-217ENST00000559108 FXNQ16595 210 aa9.87□□□□□ -0.83
TPM1-217ENST00000559108 DUSP7Q16829 419 aa9.87□□□□□ -0.83
TPM1-217ENST00000559108 PLPPR5Q32ZL2 321 aa9.87□□□□□ -0.83
TPM1-217ENST00000559108 RNF220Q5VTB9 566 aa9.87□□□□□ -0.83
TPM1-217ENST00000559108 PRAMEF8Q5VWM4 474 aa9.87□□□□□ -0.83
TPM1-217ENST00000559108 PRAMEF7Q5VXH5 474 aa9.87□□□□□ -0.83
TPM1-217ENST00000559108 PLXDC2Q6UX71 529 aa9.87□□□□□ -0.83
TPM1-217ENST00000559108 MICU2Q8IYU8 434 aa9.87□□□□□ -0.83
TPM1-217ENST00000559108 DEFB107AQ8IZN7 70 aa9.87□□□□□ -0.83
TPM1-217ENST00000559108 RPRMLQ8N4K4 120 aa9.87□□□□□ -0.83
TPM1-217ENST00000559108 SMYD1Q8NB12 490 aa9.87□□□□□ -0.83
TPM1-217ENST00000559108 ST6GALNAC3Q8NDV1 305 aa9.87□□□□□ -0.83
TPM1-217ENST00000559108 OR2T12Q8NG77 320 aa9.87□□□□□ -0.83
TPM1-217ENST00000559108 OR4K17Q8NGC6 315 aa9.87□□□□□ -0.83
TPM1-217ENST00000559108 OR10Q1Q8NGQ4 319 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms