RNA–Protein interactions for RNA: ENST00000558937.1

SMAD6-203, Transcript of SMAD family member 6, humanhuman

TSL 5

Gene SMAD6, Length 632 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-203ENST00000558937 NPIPB9F8W1W9 429 aa13.54□□□□□ -0.24
SMAD6-203ENST00000558937 TNFSF11O14788 317 aa13.54□□□□□ -0.24
SMAD6-203ENST00000558937 TM9SF1O15321 606 aa13.54□□□□□ -0.24
SMAD6-203ENST00000558937 ZNF500O60304 480 aaPredicted RBP13.54□□□□□ -0.24
SMAD6-203ENST00000558937 LINGO3P0C6S8 592 aa13.54□□□□□ -0.24
SMAD6-203ENST00000558937 IL11P20809 199 aa13.54□□□□□ -0.24
SMAD6-203ENST00000558937 RPS26P62854 115 aaKnown RBP13.54□□□□□ -0.24
SMAD6-203ENST00000558937 FOXF1Q12946 379 aa13.54□□□□□ -0.24
SMAD6-203ENST00000558937 SMU1Q2TAY7 513 aa13.54□□□□□ -0.24
SMAD6-203ENST00000558937 PGS1Q32NB8 556 aa13.54□□□□□ -0.24
SMAD6-203ENST00000558937 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.54□□□□□ -0.24
SMAD6-203ENST00000558937 OR4F3Q6IEY1 312 aa13.54□□□□□ -0.24
SMAD6-203ENST00000558937 CBLN3Q6UW01 205 aa13.54□□□□□ -0.24
SMAD6-203ENST00000558937 ESPNLQ6ZVH7 1005 aa13.54□□□□□ -0.24
SMAD6-203ENST00000558937 FAM214BQ7L5A3 538 aa13.54□□□□□ -0.24
SMAD6-203ENST00000558937 MTERF4Q7Z6M4 381 aaKnown RBP13.54□□□□□ -0.24
SMAD6-203ENST00000558937 TGIF2LYQ8IUE0 185 aa13.54□□□□□ -0.24
SMAD6-203ENST00000558937 ZNF610Q8N9Z0 462 aa13.54□□□□□ -0.24
SMAD6-203ENST00000558937 OR5D16Q8NGK9 328 aa13.54□□□□□ -0.24
SMAD6-203ENST00000558937 OR2V1Q8NHB1 315 aa13.54□□□□□ -0.24
SMAD6-203ENST00000558937 ZBTB9Q96C00 473 aa13.54□□□□□ -0.24
SMAD6-203ENST00000558937 WFIKKN1Q96NZ8 548 aa13.54□□□□□ -0.24
SMAD6-203ENST00000558937 SORT1Q99523 831 aa13.54□□□□□ -0.24
SMAD6-203ENST00000558937 SLC39A3Q9BRY0 314 aa13.54□□□□□ -0.24
SMAD6-203ENST00000558937 TMUB1Q9BVT8 246 aa13.54□□□□□ -0.24
SMAD6-203ENST00000558937 C20orf27Q9GZN8 174 aa13.54□□□□□ -0.24
SMAD6-203ENST00000558937 HOXD1Q9GZZ0 328 aa13.54□□□□□ -0.24
SMAD6-203ENST00000558937 CENPHQ9H3R5 247 aa13.54□□□□□ -0.24
SMAD6-203ENST00000558937 SERHL2Q9H4I8 314 aa13.54□□□□□ -0.24
SMAD6-203ENST00000558937 AKTIPQ9H8T0 292 aa13.54□□□□□ -0.24
SMAD6-203ENST00000558937 PAQR5Q9NXK6 330 aaPredicted RBP13.54□□□□□ -0.24
SMAD6-203ENST00000558937 ELOVL5Q9NYP7 299 aa13.54□□□□□ -0.24
SMAD6-203ENST00000558937 MCTS1Q9ULC4 181 aaKnown RBP13.54□□□□□ -0.24
SMAD6-203ENST00000558937 CLEC4AQ9UMR7 237 aa13.54□□□□□ -0.24
SMAD6-203ENST00000558937 RAP2CQ9Y3L5 183 aa13.54□□□□□ -0.24
SMAD6-203ENST00000558937 ITPR3Q14573 2671 aa13.53□□□□□ -0.24
SMAD6-203ENST00000558937 ADAMDEC1O15204 470 aa13.53□□□□□ -0.24
SMAD6-203ENST00000558937 SIAH2O43255 324 aa13.53□□□□□ -0.24
SMAD6-203ENST00000558937 SS18L1O75177 396 aaPredicted RBP13.53□□□□□ -0.24
SMAD6-203ENST00000558937 SYNGR4O95473 234 aa13.53□□□□□ -0.24
SMAD6-203ENST00000558937 MYZAPP0CAP1 466 aa13.53□□□□□ -0.24
SMAD6-203ENST00000558937 CD99P14209 185 aa13.53□□□□□ -0.24
SMAD6-203ENST00000558937 BGNP21810 368 aa13.53□□□□□ -0.24
SMAD6-203ENST00000558937 ME2P23368 584 aa13.53□□□□□ -0.24
SMAD6-203ENST00000558937 SHC1P29353 583 aa13.53□□□□□ -0.24
SMAD6-203ENST00000558937 UGT2B10P36537 528 aa13.53□□□□□ -0.24
SMAD6-203ENST00000558937 KCNJ5P48544 419 aa13.53□□□□□ -0.24
SMAD6-203ENST00000558937 SLC1A6P48664 564 aa13.53□□□□□ -0.24
SMAD6-203ENST00000558937 ATP12AP54707 1039 aa13.53□□□□□ -0.24
SMAD6-203ENST00000558937 SUMO3P55854 103 aaPredicted RBP13.53□□□□□ -0.24
SMAD6-203ENST00000558937 KEAP1Q14145 624 aa13.53□□□□□ -0.24
SMAD6-203ENST00000558937 MPP2Q14168 576 aa13.53□□□□□ -0.24
SMAD6-203ENST00000558937 DEFB113Q30KQ7 82 aa13.53□□□□□ -0.24
SMAD6-203ENST00000558937 NDUFAF6Q330K2 333 aa13.53□□□□□ -0.24
SMAD6-203ENST00000558937 KLHL26Q53HC5 615 aa13.53□□□□□ -0.24
SMAD6-203ENST00000558937 TNFAIP8L3Q5GJ75 292 aa13.53□□□□□ -0.24
SMAD6-203ENST00000558937 CEP85LQ5SZL2 805 aa13.53□□□□□ -0.24
SMAD6-203ENST00000558937 ZNF550Q7Z398 422 aa13.53□□□□□ -0.24
SMAD6-203ENST00000558937 ZNF614Q8N883 585 aa13.53□□□□□ -0.24
SMAD6-203ENST00000558937 ZNF527Q8NB42 609 aa13.53□□□□□ -0.24
SMAD6-203ENST00000558937 OR6K3Q8NGY3 331 aa13.53□□□□□ -0.24
SMAD6-203ENST00000558937 GMPPAQ96IJ6 420 aaPredicted RBP13.53□□□□□ -0.24
SMAD6-203ENST00000558937 SLC35G5Q96KT7 338 aa13.53□□□□□ -0.24
SMAD6-203ENST00000558937 KLHL15Q96M94 604 aa13.53□□□□□ -0.24
SMAD6-203ENST00000558937 MED18Q9BUE0 208 aa13.53□□□□□ -0.24
SMAD6-203ENST00000558937 C6orf203Q9P0P8 240 aaPredicted RBP13.53□□□□□ -0.24
SMAD6-203ENST00000558937 RAB21Q9UL25 225 aa13.53□□□□□ -0.24
SMAD6-203ENST00000558937 CARD8Q9Y2G2 431 aa13.53□□□□□ -0.24
SMAD6-203ENST00000558937 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.53□□□□□ -0.24
SMAD6-203ENST00000558937 EMC9Q9Y3B6 208 aa13.53□□□□□ -0.24
SMAD6-203ENST00000558937 UQCRHLA0A096LP55 91 aa13.52□□□□□ -0.25
SMAD6-203ENST00000558937 RNF103-CHMP3A0A140T963 221 aa13.52□□□□□ -0.25
SMAD6-203ENST00000558937 DEFB108AA8MXU0 73 aa13.52□□□□□ -0.25
SMAD6-203ENST00000558937 H3BNH8 94 aa13.52□□□□□ -0.25
SMAD6-203ENST00000558937 SOX30O94993 753 aa13.52□□□□□ -0.25
SMAD6-203ENST00000558937 NUDT14O95848 222 aa13.52□□□□□ -0.25
SMAD6-203ENST00000558937 PLGP00747 810 aaPredicted RBP13.52□□□□□ -0.25
SMAD6-203ENST00000558937 CRYGSP22914 178 aa13.52□□□□□ -0.25
SMAD6-203ENST00000558937 ELK4P28324 431 aa13.52□□□□□ -0.25
SMAD6-203ENST00000558937 SFTPDP35247 375 aa13.52□□□□□ -0.25
SMAD6-203ENST00000558937 EIF1P41567 113 aaKnown RBP13.52□□□□□ -0.25
SMAD6-203ENST00000558937 RPL14P50914 215 aaKnown RBP13.52□□□□□ -0.25
SMAD6-203ENST00000558937 P2RX1P51575 399 aa13.52□□□□□ -0.25
SMAD6-203ENST00000558937 CTBP2P56545 445 aa13.52□□□□□ -0.25
SMAD6-203ENST00000558937 PDSS1Q5T2R2 415 aa13.52□□□□□ -0.25
SMAD6-203ENST00000558937 HBMQ6B0K9 141 aa13.52□□□□□ -0.25
SMAD6-203ENST00000558937 BHLHB9Q6PI77 547 aa13.52□□□□□ -0.25
SMAD6-203ENST00000558937 CLEC4FQ8N1N0 589 aa13.52□□□□□ -0.25
SMAD6-203ENST00000558937 SDF2Q99470 211 aa13.52□□□□□ -0.25
SMAD6-203ENST00000558937 DPY30Q9C005 99 aa13.52□□□□□ -0.25
SMAD6-203ENST00000558937 KCNK9Q9NPC2 374 aa13.52□□□□□ -0.25
SMAD6-203ENST00000558937 ZNF226Q9NYT6 803 aa13.52□□□□□ -0.25
SMAD6-203ENST00000558937 HAO1Q9UJM8 370 aa13.52□□□□□ -0.25
SMAD6-203ENST00000558937 ICAM5Q9UMF0 924 aa13.52□□□□□ -0.25
SMAD6-203ENST00000558937 DTNAQ9Y4J8 743 aa13.52□□□□□ -0.25
SMAD6-203ENST00000558937 HEATR5AQ86XA9 2040 aa13.52□□□□□ -0.25
SMAD6-203ENST00000558937 C16orf97H3BN30 126 aa13.51□□□□□ -0.25
SMAD6-203ENST00000558937 GTPBP1O00178 669 aaKnown RBP13.51□□□□□ -0.25
SMAD6-203ENST00000558937 RNASET2O00584 256 aaKnown RBP13.51□□□□□ -0.25
SMAD6-203ENST00000558937 EFNA2O43921 213 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms