RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 BPGMP07738 259 aa12.1□□□□□ -0.47
VPS18-203ENST00000558855 G6PDP11413 515 aa12.1□□□□□ -0.47
VPS18-203ENST00000558855 AGTR1P30556 359 aa12.1□□□□□ -0.47
VPS18-203ENST00000558855 SFTPDP35247 375 aa12.1□□□□□ -0.47
VPS18-203ENST00000558855 HPCAL1P37235 193 aa12.1□□□□□ -0.47
VPS18-203ENST00000558855 ASMTP46597 345 aa12.1□□□□□ -0.47
VPS18-203ENST00000558855 KCNJ5P48544 419 aa12.1□□□□□ -0.47
VPS18-203ENST00000558855 PCYT1AP49585 367 aa12.1□□□□□ -0.47
VPS18-203ENST00000558855 EEFSECP57772 596 aaKnown RBP12.1□□□□□ -0.47
VPS18-203ENST00000558855 RPS3AP61247 264 aaKnown RBP12.1□□□□□ -0.47
VPS18-203ENST00000558855 TP53BP2Q13625 1128 aa12.1□□□□□ -0.47
VPS18-203ENST00000558855 KRTAP21-3Q3LHN1 58 aa12.1□□□□□ -0.47
VPS18-203ENST00000558855 VPS26BQ4G0F5 336 aa12.1□□□□□ -0.47
VPS18-203ENST00000558855 KLHL26Q53HC5 615 aa12.1□□□□□ -0.47
VPS18-203ENST00000558855 Q5PR19 223 aa12.1□□□□□ -0.47
VPS18-203ENST00000558855 DCST2Q5T1A1 773 aa12.1□□□□□ -0.47
VPS18-203ENST00000558855 CPTPQ5TA50 214 aa12.1□□□□□ -0.47
VPS18-203ENST00000558855 LRIG3Q6UXM1 1119 aa12.1□□□□□ -0.47
VPS18-203ENST00000558855 NUFIP2Q7Z417 695 aaKnown RBP12.1□□□□□ -0.47
VPS18-203ENST00000558855 B4GALNT2Q8NHY0 566 aa12.1□□□□□ -0.47
VPS18-203ENST00000558855 ABHD3Q8WU67 409 aa12.1□□□□□ -0.47
VPS18-203ENST00000558855 COQ8BQ96D53 544 aa12.1□□□□□ -0.47
VPS18-203ENST00000558855 DTNBP1Q96EV8 351 aa12.1□□□□□ -0.47
VPS18-203ENST00000558855 PPP1R36Q96LQ0 422 aa12.1□□□□□ -0.47
VPS18-203ENST00000558855 PPP3R2Q96LZ3 170 aa12.1□□□□□ -0.47
VPS18-203ENST00000558855 C12orf49Q9H741 205 aa12.1□□□□□ -0.47
VPS18-203ENST00000558855 PLSCR4Q9NRQ2 329 aa12.1□□□□□ -0.47
VPS18-203ENST00000558855 UBQLN4Q9NRR5 601 aa12.1□□□□□ -0.47
VPS18-203ENST00000558855 BEX4Q9NWD9 120 aaPredicted RBP12.1□□□□□ -0.47
VPS18-203ENST00000558855 ELOVL5Q9NYP7 299 aa12.1□□□□□ -0.47
VPS18-203ENST00000558855 EIF3LQ9Y262 564 aaKnown RBP12.1□□□□□ -0.47
VPS18-203ENST00000558855 CARD8Q9Y2G2 431 aa12.1□□□□□ -0.47
VPS18-203ENST00000558855 A0A087WZY1 265 aa12.09□□□□□ -0.47
VPS18-203ENST00000558855 CASKO14936 926 aa12.09□□□□□ -0.47
VPS18-203ENST00000558855 CHEK2O96017 543 aa12.09□□□□□ -0.47
VPS18-203ENST00000558855 CCT3P49368 545 aaKnown RBP12.09□□□□□ -0.47
VPS18-203ENST00000558855 CASP9P55211 416 aa12.09□□□□□ -0.47
VPS18-203ENST00000558855 RAC1P63000 192 aa12.09□□□□□ -0.47
VPS18-203ENST00000558855 EEF1A1P68104 462 aaKnown RBP12.09□□□□□ -0.47
VPS18-203ENST00000558855 HBA1P69905 142 aa12.09□□□□□ -0.47
VPS18-203ENST00000558855 PHC1P78364 1004 aa12.09□□□□□ -0.47
VPS18-203ENST00000558855 PLAURQ03405 335 aa12.09□□□□□ -0.47
VPS18-203ENST00000558855 ZNF239Q16600 458 aaKnown RBP12.09□□□□□ -0.47
VPS18-203ENST00000558855 EEF1A1P5Q5VTE0 462 aa12.09□□□□□ -0.47
VPS18-203ENST00000558855 HBMQ6B0K9 141 aa12.09□□□□□ -0.47
VPS18-203ENST00000558855 WDR75Q8IWA0 830 aaKnown RBP12.09□□□□□ -0.47
VPS18-203ENST00000558855 RIBC1Q8N443 379 aaPredicted RBP12.09□□□□□ -0.47
VPS18-203ENST00000558855 FNDC5Q8NAU1 212 aa12.09□□□□□ -0.47
VPS18-203ENST00000558855 OR6K3Q8NGY3 331 aa12.09□□□□□ -0.47
VPS18-203ENST00000558855 FBXO27Q8NI29 283 aa12.09□□□□□ -0.47
VPS18-203ENST00000558855 PHOSPHO1Q8TCT1 267 aa12.09□□□□□ -0.47
VPS18-203ENST00000558855 ACTRT2Q8TDY3 377 aa12.09□□□□□ -0.47
VPS18-203ENST00000558855 OR5P2Q8WZ92 322 aa12.09□□□□□ -0.47
VPS18-203ENST00000558855 ZBTB8AQ96BR9 441 aa12.09□□□□□ -0.47
VPS18-203ENST00000558855 CHMP6Q96FZ7 201 aa12.09□□□□□ -0.47
VPS18-203ENST00000558855 GMPPAQ96IJ6 420 aaPredicted RBP12.09□□□□□ -0.47
VPS18-203ENST00000558855 OR7D2Q96RA2 312 aa12.09□□□□□ -0.47
VPS18-203ENST00000558855 STACQ99469 402 aa12.09□□□□□ -0.47
VPS18-203ENST00000558855 IQCGQ9H095 443 aaKnown RBP12.09□□□□□ -0.47
VPS18-203ENST00000558855 DUSP22Q9NRW4 184 aa12.09□□□□□ -0.47
VPS18-203ENST00000558855 ING1Q9UK53 422 aaPredicted RBP12.09□□□□□ -0.47
VPS18-203ENST00000558855 CR1P17927 2039 aa12.09□□□□□ -0.47
VPS18-203ENST00000558855 IGHV3-15A0A0B4J1V0 119 aa12.08□□□□□ -0.48
VPS18-203ENST00000558855 SCDO00767 359 aa12.08□□□□□ -0.48
VPS18-203ENST00000558855 FCGR2AP12318 317 aa12.08□□□□□ -0.48
VPS18-203ENST00000558855 PRKCAP17252 672 aa12.08□□□□□ -0.48
VPS18-203ENST00000558855 ZNF41P51814 821 aaPredicted RBP12.08□□□□□ -0.48
VPS18-203ENST00000558855 OCRLQ01968 901 aa12.08□□□□□ -0.48
VPS18-203ENST00000558855 LTBQ06643 244 aa12.08□□□□□ -0.48
VPS18-203ENST00000558855 FUT5Q11128 374 aa12.08□□□□□ -0.48
VPS18-203ENST00000558855 MPP2Q14168 576 aa12.08□□□□□ -0.48
VPS18-203ENST00000558855 PDCD2Q16342 344 aaPredicted RBP12.08□□□□□ -0.48
VPS18-203ENST00000558855 ACKR1Q16570 336 aa12.08□□□□□ -0.48
VPS18-203ENST00000558855 ATP6AP1LQ52LC2 224 aa12.08□□□□□ -0.48
VPS18-203ENST00000558855 OR4F3Q6IEY1 312 aa12.08□□□□□ -0.48
VPS18-203ENST00000558855 ZCCHC12Q6PEW1 402 aa12.08□□□□□ -0.48
VPS18-203ENST00000558855 SEZ6L2Q6UXD5 910 aa12.08□□□□□ -0.48
VPS18-203ENST00000558855 R3HCC1LQ7Z5L2 792 aaKnown RBP12.08□□□□□ -0.48
VPS18-203ENST00000558855 LILRA2Q8N149 483 aa12.08□□□□□ -0.48
VPS18-203ENST00000558855 ZNF781Q8N8C0 355 aa12.08□□□□□ -0.48
VPS18-203ENST00000558855 GPR119Q8TDV5 335 aa12.08□□□□□ -0.48
VPS18-203ENST00000558855 RNF128Q8TEB7 428 aa12.08□□□□□ -0.48
VPS18-203ENST00000558855 OSTF1Q92882 214 aa12.08□□□□□ -0.48
VPS18-203ENST00000558855 PERPQ96FX8 193 aa12.08□□□□□ -0.48
VPS18-203ENST00000558855 C18orf12Q96KH6 178 aa12.08□□□□□ -0.48
VPS18-203ENST00000558855 KLHL15Q96M94 604 aa12.08□□□□□ -0.48
VPS18-203ENST00000558855 SORT1Q99523 831 aa12.08□□□□□ -0.48
VPS18-203ENST00000558855 ACTRT3Q9BYD9 372 aa12.08□□□□□ -0.48
VPS18-203ENST00000558855 PRRG4Q9BZD6 226 aa12.08□□□□□ -0.48
VPS18-203ENST00000558855 A0A1W2PNR3 127 aa12.07□□□□□ -0.48
VPS18-203ENST00000558855 WDR91A4D1P6 747 aa12.07□□□□□ -0.48
VPS18-203ENST00000558855 TRIM64A6NGJ6 449 aa12.07□□□□□ -0.48
VPS18-203ENST00000558855 TRIM64BA6NI03 449 aa12.07□□□□□ -0.48
VPS18-203ENST00000558855 TMEM114B3SHH9 223 aa12.07□□□□□ -0.48
VPS18-203ENST00000558855 FCMRO60667 390 aa12.07□□□□□ -0.48
VPS18-203ENST00000558855 SCN2BO60939 215 aa12.07□□□□□ -0.48
VPS18-203ENST00000558855 GCM2O75603 506 aaPredicted RBP12.07□□□□□ -0.48
VPS18-203ENST00000558855 H6PDO95479 791 aa12.07□□□□□ -0.48
VPS18-203ENST00000558855 INHBBP09529 407 aa12.07□□□□□ -0.48
VPS18-203ENST00000558855 FOSL1P15407 271 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms