RNA–Protein interactions for RNA: ENST00000558649.5

RABGGTA-206, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-206ENST00000558649 MED17Q9NVC6 651 aa14.35□□□□□ -0.11
RABGGTA-206ENST00000558649 ARHGAP21Q5T5U3 1957 aa14.34□□□□□ -0.11
RABGGTA-206ENST00000558649 PHF3Q92576 2039 aaKnown RBP14.34□□□□□ -0.11
RABGGTA-206ENST00000558649 TMEM247A6NEH6 219 aa14.34□□□□□ -0.11
RABGGTA-206ENST00000558649 ZNF264O43296 627 aa14.34□□□□□ -0.11
RABGGTA-206ENST00000558649 NUDT7P0C024 238 aa14.34□□□□□ -0.11
RABGGTA-206ENST00000558649 GLI4P10075 376 aa14.34□□□□□ -0.11
RABGGTA-206ENST00000558649 CHMP24386 653 aa14.34□□□□□ -0.11
RABGGTA-206ENST00000558649 LHX2P50458 406 aa14.34□□□□□ -0.11
RABGGTA-206ENST00000558649 P2RX1P51575 399 aa14.34□□□□□ -0.11
RABGGTA-206ENST00000558649 GNGT1P63211 74 aa14.34□□□□□ -0.11
RABGGTA-206ENST00000558649 KLF10Q13118 480 aa14.34□□□□□ -0.11
RABGGTA-206ENST00000558649 NFYCQ13952 458 aa14.34□□□□□ -0.11
RABGGTA-206ENST00000558649 PLPPR5Q32ZL2 321 aa14.34□□□□□ -0.11
RABGGTA-206ENST00000558649 PLXDC2Q6UX71 529 aa14.34□□□□□ -0.11
RABGGTA-206ENST00000558649 LRRC74BQ6ZQY2 392 aa14.34□□□□□ -0.11
RABGGTA-206ENST00000558649 EIF3MQ7L2H7 374 aaKnown RBP14.34□□□□□ -0.11
RABGGTA-206ENST00000558649 RETREG3Q86VR2 466 aa14.34□□□□□ -0.11
RABGGTA-206ENST00000558649 ZNF808Q8N4W9 903 aaPredicted RBP14.34□□□□□ -0.11
RABGGTA-206ENST00000558649 MAL2Q969L2 176 aa14.34□□□□□ -0.11
RABGGTA-206ENST00000558649 ZG16BQ96DA0 208 aa14.34□□□□□ -0.11
RABGGTA-206ENST00000558649 RNF145Q96MT1 663 aa14.34□□□□□ -0.11
RABGGTA-206ENST00000558649 NPAS1Q99742 590 aa14.34□□□□□ -0.11
RABGGTA-206ENST00000558649 ELAC2Q9BQ52 826 aaKnown RBP14.34□□□□□ -0.11
RABGGTA-206ENST00000558649 TRIM8Q9BZR9 551 aa14.34□□□□□ -0.11
RABGGTA-206ENST00000558649 SAP130Q9H0E3 1048 aa14.34□□□□□ -0.11
RABGGTA-206ENST00000558649 NSRP1Q9H0G5 558 aaKnown RBP14.34□□□□□ -0.11
RABGGTA-206ENST00000558649 SAR1AQ9NR31 198 aa14.34□□□□□ -0.11
RABGGTA-206ENST00000558649 COQ3Q9NZJ6 369 aa14.34□□□□□ -0.11
RABGGTA-206ENST00000558649 ARMCX1Q9P291 453 aa14.34□□□□□ -0.11
RABGGTA-206ENST00000558649 PLEKHB1Q9UF11 243 aaPredicted RBP14.34□□□□□ -0.11
RABGGTA-206ENST00000558649 ZNF337Q9Y3M9 751 aa14.34□□□□□ -0.11
RABGGTA-206ENST00000558649 USP9XQ93008 2570 aaPredicted RBP14.34□□□□□ -0.11
RABGGTA-206ENST00000558649 KIAA1549Q9HCM3 1950 aa14.34□□□□□ -0.11
RABGGTA-206ENST00000558649 NCOA6Q14686 2063 aaPredicted RBP14.34□□□□□ -0.11
RABGGTA-206ENST00000558649 DOPEY2Q9Y3R5 2298 aa14.33□□□□□ -0.12
RABGGTA-206ENST00000558649 A0A087WZY1 265 aa14.33□□□□□ -0.12
RABGGTA-206ENST00000558649 CLDN24A6NM45 220 aa14.33□□□□□ -0.12
RABGGTA-206ENST00000558649 AHRRA9YTQ3 701 aa14.33□□□□□ -0.12
RABGGTA-206ENST00000558649 PPIBP23284 216 aaKnown RBP14.33□□□□□ -0.12
RABGGTA-206ENST00000558649 LSP1P33241 339 aa14.33□□□□□ -0.12
RABGGTA-206ENST00000558649 MAGEA8P43361 318 aa14.33□□□□□ -0.12
RABGGTA-206ENST00000558649 CRISP3P54108 245 aa14.33□□□□□ -0.12
RABGGTA-206ENST00000558649 CLDN18P56856 261 aa14.33□□□□□ -0.12
RABGGTA-206ENST00000558649 FOXF1Q12946 379 aa14.33□□□□□ -0.12
RABGGTA-206ENST00000558649 FADDQ13158 208 aa14.33□□□□□ -0.12
RABGGTA-206ENST00000558649 SKP2Q13309 424 aa14.33□□□□□ -0.12
RABGGTA-206ENST00000558649 FGFBP1Q14512 234 aa14.33□□□□□ -0.12
RABGGTA-206ENST00000558649 CDSNQ15517 529 aa14.33□□□□□ -0.12
RABGGTA-206ENST00000558649 MAPK11Q15759 364 aa14.33□□□□□ -0.12
RABGGTA-206ENST00000558649 TOMM34Q15785 309 aaPredicted RBP14.33□□□□□ -0.12
RABGGTA-206ENST00000558649 MMEL1Q495T6 779 aa14.33□□□□□ -0.12
RABGGTA-206ENST00000558649 DLEU7Q6UYE1 221 aa14.33□□□□□ -0.12
RABGGTA-206ENST00000558649 MAMDC2Q7Z304 686 aaPredicted RBP14.33□□□□□ -0.12
RABGGTA-206ENST00000558649 SPATA21Q7Z572 469 aa14.33□□□□□ -0.12
RABGGTA-206ENST00000558649 CCDC71Q8IV32 467 aaPredicted RBP14.33□□□□□ -0.12
RABGGTA-206ENST00000558649 TOR1AIP2Q8NFQ8 470 aa14.33□□□□□ -0.12
RABGGTA-206ENST00000558649 SLC38A5Q8WUX1 472 aa14.33□□□□□ -0.12
RABGGTA-206ENST00000558649 WDR60Q8WVS4 1066 aa14.33□□□□□ -0.12
RABGGTA-206ENST00000558649 ZBTB8AQ96BR9 441 aa14.33□□□□□ -0.12
RABGGTA-206ENST00000558649 TMEM19Q96HH6 336 aa14.33□□□□□ -0.12
RABGGTA-206ENST00000558649 TUBA1CQ9BQE3 449 aa14.33□□□□□ -0.12
RABGGTA-206ENST00000558649 IKZF5Q9H5V7 419 aa14.33□□□□□ -0.12
RABGGTA-206ENST00000558649 TMEM185BQ9H7F4 350 aa14.33□□□□□ -0.12
RABGGTA-206ENST00000558649 THUMPD1Q9NXG2 353 aaKnown RBP14.33□□□□□ -0.12
RABGGTA-206ENST00000558649 ICAM5Q9UMF0 924 aa14.33□□□□□ -0.12
RABGGTA-206ENST00000558649 RNF6Q9Y252 685 aa14.33□□□□□ -0.12
RABGGTA-206ENST00000558649 MED12Q93074 2177 aa14.33□□□□□ -0.12
RABGGTA-206ENST00000558649 DIDO1Q9BTC0 2240 aaKnown RBP14.33□□□□□ -0.12
RABGGTA-206ENST00000558649 TRBV5-3A0A0A0MS03 114 aa14.32□□□□□ -0.12
RABGGTA-206ENST00000558649 EVPLLA8MZ36 301 aa14.32□□□□□ -0.12
RABGGTA-206ENST00000558649 C5orf58C9J3I9 102 aa14.32□□□□□ -0.12
RABGGTA-206ENST00000558649 H0YC42 278 aa14.32□□□□□ -0.12
RABGGTA-206ENST00000558649 BCAS1O75363 584 aaPredicted RBP14.32□□□□□ -0.12
RABGGTA-206ENST00000558649 OPN1LWP04000 364 aa14.32□□□□□ -0.12
RABGGTA-206ENST00000558649 GUSBP08236 651 aa14.32□□□□□ -0.12
RABGGTA-206ENST00000558649 HOXD4P09016 255 aaPredicted RBP14.32□□□□□ -0.12
RABGGTA-206ENST00000558649 TFPTP0C1Z6 253 aa14.32□□□□□ -0.12
RABGGTA-206ENST00000558649 PEPDP12955 493 aa14.32□□□□□ -0.12
RABGGTA-206ENST00000558649 CPN1P15169 458 aa14.32□□□□□ -0.12
RABGGTA-206ENST00000558649 IL7RP16871 459 aa14.32□□□□□ -0.12
RABGGTA-206ENST00000558649 ZNF708P17019 499 aa14.32□□□□□ -0.12
RABGGTA-206ENST00000558649 PTGER4P35408 488 aa14.32□□□□□ -0.12
RABGGTA-206ENST00000558649 ADH7P40394 386 aa14.32□□□□□ -0.12
RABGGTA-206ENST00000558649 TPD52P55327 224 aaPredicted RBP14.32□□□□□ -0.12
RABGGTA-206ENST00000558649 SUMO3P55854 103 aaPredicted RBP14.32□□□□□ -0.12
RABGGTA-206ENST00000558649 MTPNP58546 118 aa14.32□□□□□ -0.12
RABGGTA-206ENST00000558649 CBFBQ13951 182 aa14.32□□□□□ -0.12
RABGGTA-206ENST00000558649 CAPRIN1Q14444 709 aaKnown RBP14.32□□□□□ -0.12
RABGGTA-206ENST00000558649 GLYR1Q49A26 553 aaPredicted RBP14.32□□□□□ -0.12
RABGGTA-206ENST00000558649 GCNT6Q5T4J0 391 aa14.32□□□□□ -0.12
RABGGTA-206ENST00000558649 HIST2H2BCQ6DN03 193 aa14.32□□□□□ -0.12
RABGGTA-206ENST00000558649 XKRXQ6PP77 449 aa14.32□□□□□ -0.12
RABGGTA-206ENST00000558649 CPLX4Q7Z7G2 160 aa14.32□□□□□ -0.12
RABGGTA-206ENST00000558649 SNX32Q86XE0 403 aa14.32□□□□□ -0.12
RABGGTA-206ENST00000558649 C10orf111Q8N326 155 aa14.32□□□□□ -0.12
RABGGTA-206ENST00000558649 MEIOBQ8N635 442 aa14.32□□□□□ -0.12
RABGGTA-206ENST00000558649 OR5W2Q8NH69 310 aa14.32□□□□□ -0.12
RABGGTA-206ENST00000558649 CA5BP1Q8WTZ4 195 aa14.32□□□□□ -0.12
RABGGTA-206ENST00000558649 CPPED1Q9BRF8 314 aaPredicted RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms