RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 FAM129AQ9BZQ8 928 aa3.89□□□□□ -1.79
SPG11-211ENST00000558561 ILKAPQ9H0C8 392 aaPredicted RBP3.89□□□□□ -1.79
SPG11-211ENST00000558561 TSPYL1Q9H0U9 437 aa3.89□□□□□ -1.79
SPG11-211ENST00000558561 DEFB127Q9H1M4 99 aa3.89□□□□□ -1.79
SPG11-211ENST00000558561 CLMPQ9H6B4 373 aa3.89□□□□□ -1.79
SPG11-211ENST00000558561 RPF2Q9H7B2 306 aaKnown RBP3.89□□□□□ -1.79
SPG11-211ENST00000558561 MMP25Q9NPA2 562 aa3.89□□□□□ -1.79
SPG11-211ENST00000558561 C14orf105Q9NVL8 296 aa3.89□□□□□ -1.79
SPG11-211ENST00000558561 GAR1Q9NY12 217 aaKnown RBP3.89□□□□□ -1.79
SPG11-211ENST00000558561 LRFN1Q9P244 771 aa3.89□□□□□ -1.79
SPG11-211ENST00000558561 ERVK-11Q9UQG0 969 aa3.89□□□□□ -1.79
SPG11-211ENST00000558561 ERVK-19Q9WJR5 959 aa3.89□□□□□ -1.79
SPG11-211ENST00000558561 OSGIN2Q9Y236 505 aa3.89□□□□□ -1.79
SPG11-211ENST00000558561 DLGAP4Q9Y2H0 992 aa3.89□□□□□ -1.79
SPG11-211ENST00000558561 SPTAN1Q13813 2472 aaKnown RBP3.89□□□□□ -1.79
SPG11-211ENST00000558561 UBR5O95071 2799 aaPredicted RBP3.89□□□□□ -1.79
SPG11-211ENST00000558561 SPTBN1Q01082 2364 aaKnown RBP3.89□□□□□ -1.79
SPG11-211ENST00000558561 HECTD1Q9ULT8 2610 aa3.89□□□□□ -1.79
SPG11-211ENST00000558561 MPDZO75970 2070 aa3.88□□□□□ -1.79
SPG11-211ENST00000558561 FLNBO75369 2602 aaKnown RBP3.88□□□□□ -1.79
SPG11-211ENST00000558561 ATP6AP2A0A1C7CYW4 349 aa3.88□□□□□ -1.79
SPG11-211ENST00000558561 OR5H15A6NDH6 313 aa3.88□□□□□ -1.79
SPG11-211ENST00000558561 URADA6NGE7 173 aa3.88□□□□□ -1.79
SPG11-211ENST00000558561 LINC01548A6NM66 108 aa3.88□□□□□ -1.79
SPG11-211ENST00000558561 NPIPA5E9PKD4 350 aa3.88□□□□□ -1.79
SPG11-211ENST00000558561 PSMD12O00232 456 aaPredicted RBP3.88□□□□□ -1.79
SPG11-211ENST00000558561 CLDN4O14493 209 aa3.88□□□□□ -1.79
SPG11-211ENST00000558561 FCHO1O14526 889 aa3.88□□□□□ -1.79
SPG11-211ENST00000558561 COPEO14579 308 aa3.88□□□□□ -1.79
SPG11-211ENST00000558561 ERAL1O75616 437 aaKnown RBP3.88□□□□□ -1.79
SPG11-211ENST00000558561 ATP6AP2O75787 350 aa3.88□□□□□ -1.79
SPG11-211ENST00000558561 RSL1D1O76021 490 aaKnown RBP3.88□□□□□ -1.79
SPG11-211ENST00000558561 CLDN1O95832 211 aa3.88□□□□□ -1.79
SPG11-211ENST00000558561 CSTBP04080 98 aaKnown RBP3.88□□□□□ -1.79
SPG11-211ENST00000558561 IGKV3-11P04433 115 aa3.88□□□□□ -1.79
SPG11-211ENST00000558561 IL3P08700 152 aa3.88□□□□□ -1.79
SPG11-211ENST00000558561 NUDT17P0C025 328 aa3.88□□□□□ -1.79
SPG11-211ENST00000558561 CCL3P10147 92 aa3.88□□□□□ -1.79
SPG11-211ENST00000558561 MYL2P10916 166 aa3.88□□□□□ -1.79
SPG11-211ENST00000558561 PEPDP12955 493 aa3.88□□□□□ -1.79
SPG11-211ENST00000558561 TAC1P20366 129 aa3.88□□□□□ -1.79
SPG11-211ENST00000558561 IL10P22301 178 aa3.88□□□□□ -1.79
SPG11-211ENST00000558561 SERPINF1P36955 418 aa3.88□□□□□ -1.79
SPG11-211ENST00000558561 PIGAP37287 484 aa3.88□□□□□ -1.79
SPG11-211ENST00000558561 TSFMP43897 325 aaKnown RBP3.88□□□□□ -1.79
SPG11-211ENST00000558561 CCT5P48643 541 aa3.88□□□□□ -1.79
SPG11-211ENST00000558561 DNASE1L1P49184 302 aa3.88□□□□□ -1.79
SPG11-211ENST00000558561 RAP1GDS1P52306 607 aa3.88□□□□□ -1.79
SPG11-211ENST00000558561 HSD17B7P56937 341 aa3.88□□□□□ -1.79
SPG11-211ENST00000558561 TAS2R50P59544 299 aa3.88□□□□□ -1.79
SPG11-211ENST00000558561 TNFRSF17Q02223 184 aa3.88□□□□□ -1.79
SPG11-211ENST00000558561 OC90Q02509 493 aaPredicted RBP3.88□□□□□ -1.79
SPG11-211ENST00000558561 C2orf80Q0P641 193 aa3.88□□□□□ -1.79
SPG11-211ENST00000558561 CUL3Q13618 768 aa3.88□□□□□ -1.79
SPG11-211ENST00000558561 LARS2Q15031 903 aaKnown RBP3.88□□□□□ -1.79
SPG11-211ENST00000558561 NNATQ16517 81 aa3.88□□□□□ -1.79
SPG11-211ENST00000558561 MEP1AQ16819 746 aa3.88□□□□□ -1.79
SPG11-211ENST00000558561 TMEM35AQ53FP2 167 aa3.88□□□□□ -1.79
SPG11-211ENST00000558561 ARL13AQ5H913 290 aaPredicted RBP3.88□□□□□ -1.79
SPG11-211ENST00000558561 PAGE2BQ5JRK9 111 aa3.88□□□□□ -1.79
SPG11-211ENST00000558561 BEND6Q5SZJ8 279 aaPredicted RBP3.88□□□□□ -1.79
SPG11-211ENST00000558561 CEP85LQ5SZL2 805 aa3.88□□□□□ -1.79
SPG11-211ENST00000558561 CCNYL2Q5T2Q4 361 aa3.88□□□□□ -1.79
SPG11-211ENST00000558561 NDUFAF5Q5TEU4 345 aa3.88□□□□□ -1.79
SPG11-211ENST00000558561 SLC25A25Q6KCM7 469 aa3.88□□□□□ -1.79
SPG11-211ENST00000558561 ACSM6Q6P461 480 aa3.88□□□□□ -1.79
SPG11-211ENST00000558561 C16orf89Q6UX73 402 aa3.88□□□□□ -1.79
SPG11-211ENST00000558561 ZNF66Q6ZN08 573 aa3.88□□□□□ -1.79
SPG11-211ENST00000558561 GPRIN3Q6ZVF9 776 aa3.88□□□□□ -1.79
SPG11-211ENST00000558561 OLIG3Q7RTU3 272 aa3.88□□□□□ -1.79
SPG11-211ENST00000558561 CLEC4FQ8N1N0 589 aa3.88□□□□□ -1.79
SPG11-211ENST00000558561 ZCCHC7Q8N3Z6 543 aaKnown RBP3.88□□□□□ -1.79
SPG11-211ENST00000558561 RPRMLQ8N4K4 120 aa3.88□□□□□ -1.79
SPG11-211ENST00000558561 TBC1D19Q8N5T2 526 aa3.88□□□□□ -1.79
SPG11-211ENST00000558561 ZNF615Q8N8J6 731 aa3.88□□□□□ -1.79
SPG11-211ENST00000558561 EIF1ADQ8N9N8 165 aaKnown RBP3.88□□□□□ -1.79
SPG11-211ENST00000558561 TTLQ8NG68 377 aa3.88□□□□□ -1.79
SPG11-211ENST00000558561 CLHC1Q8NHS4 586 aa3.88□□□□□ -1.79
SPG11-211ENST00000558561 ACMSDQ8TDX5 336 aa3.88□□□□□ -1.79
SPG11-211ENST00000558561 PPP4R1Q8TF05 950 aa3.88□□□□□ -1.79
SPG11-211ENST00000558561 ADIPOR1Q96A54 375 aa3.88□□□□□ -1.79
SPG11-211ENST00000558561 MTBPQ96DY7 904 aa3.88□□□□□ -1.79
SPG11-211ENST00000558561 SCMH1Q96GD3 660 aa3.88□□□□□ -1.79
SPG11-211ENST00000558561 ZNF354BQ96LW1 612 aa3.88□□□□□ -1.79
SPG11-211ENST00000558561 RASL10BQ96S79 203 aa3.88□□□□□ -1.79
SPG11-211ENST00000558561 SERPINI1Q99574 410 aa3.88□□□□□ -1.79
SPG11-211ENST00000558561 KLHDC3Q9BQ90 382 aa3.88□□□□□ -1.79
SPG11-211ENST00000558561 CCDC77Q9BR77 488 aa3.88□□□□□ -1.79
SPG11-211ENST00000558561 RTN4RQ9BZR6 473 aa3.88□□□□□ -1.79
SPG11-211ENST00000558561 TP63Q9H3D4 680 aaPredicted RBP3.88□□□□□ -1.79
SPG11-211ENST00000558561 CENPHQ9H3R5 247 aa3.88□□□□□ -1.79
SPG11-211ENST00000558561 COPS7BQ9H9Q2 264 aaPredicted RBP3.88□□□□□ -1.79
SPG11-211ENST00000558561 CXorf21Q9HAI6 301 aa3.88□□□□□ -1.79
SPG11-211ENST00000558561 LYRM4Q9HD34 91 aa3.88□□□□□ -1.79
SPG11-211ENST00000558561 PSD3Q9NYI0 1048 aa3.88□□□□□ -1.79
SPG11-211ENST00000558561 FLRT3Q9NZU0 649 aa3.88□□□□□ -1.79
SPG11-211ENST00000558561 FETUBQ9UGM5 382 aa3.88□□□□□ -1.79
SPG11-211ENST00000558561 LGALS13Q9UHV8 139 aa3.88□□□□□ -1.79
SPG11-211ENST00000558561 SH3BGRL2Q9UJC5 107 aa3.88□□□□□ -1.79
SPG11-211ENST00000558561 NPIPA1Q9UND3 350 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 124.9 ms